FFCP PHASE1:Hg19::chr4:36245985..36246005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116984 | |EntrezGene=116984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16924 | |HGNC=16924 | ||
|TSSclassifier=strong | |||
|UniProt=A7E2A5,Q8WZ64 | |UniProt=A7E2A5,Q8WZ64 | ||
|association_with_transcript=-6bp_to_NM_015230,uc003gsq.1_5end | |association_with_transcript=-6bp_to_NM_015230,uc003gsq.1_5end | ||
|cluster_id=chr4:36245985..36246005,- | |||
|coexpression_cluster_id=C1522 | |||
|description=CAGE_peak_3_at_ARAP2_5end | |description=CAGE_peak_3_at_ARAP2_5end | ||
|id=chr4:36245985..36246005,- | |id=chr4:36245985..36246005,- | ||
|ontology_enrichment_celltype=CL:0000738!8.77e-42!140;CL:0000037!1.03e-34!172;CL:0000566!1.03e-34!172;CL:0002087!7.69e-33!119;CL:0000988!3.86e-32!182;CL:0002031!1.58e-31!124;CL:0002032!1.05e-30!165;CL:0000837!1.05e-30!165;CL:0000542!8.60e-25!53;CL:0000051!8.60e-25!53;CL:0000838!1.30e-24!52;CL:0000084!4.89e-14!25;CL:0000827!4.89e-14!25;CL:0000791!1.06e-13!18;CL:0000789!1.06e-13!18;CL:0002420!1.06e-13!18;CL:0002419!1.06e-13!18;CL:0000790!1.06e-13!18;CL:0002057!2.19e-12!42;CL:0000766!3.88e-12!76;CL:0000860!4.49e-12!45;CL:0000557!1.45e-10!71;CL:0000763!3.96e-10!112;CL:0000049!3.96e-10!112;CL:0000945!9.09e-10!24;CL:0000826!9.09e-10!24;CL:0002009!1.12e-09!65;CL:0000625!4.75e-09!11;CL:0000839!5.28e-09!70;CL:0002194!7.08e-09!63;CL:0000576!7.08e-09!63;CL:0000040!7.08e-09!63;CL:0000559!7.08e-09!63;CL:0000236!5.12e-08!14;CL:0000451!7.02e-07!10 | |ontology_enrichment_celltype=CL:0000738!8.77e-42!140;CL:0000037!1.03e-34!172;CL:0000566!1.03e-34!172;CL:0002087!7.69e-33!119;CL:0000988!3.86e-32!182;CL:0002031!1.58e-31!124;CL:0002032!1.05e-30!165;CL:0000837!1.05e-30!165;CL:0000542!8.60e-25!53;CL:0000051!8.60e-25!53;CL:0000838!1.30e-24!52;CL:0000084!4.89e-14!25;CL:0000827!4.89e-14!25;CL:0000791!1.06e-13!18;CL:0000789!1.06e-13!18;CL:0002420!1.06e-13!18;CL:0002419!1.06e-13!18;CL:0000790!1.06e-13!18;CL:0002057!2.19e-12!42;CL:0000766!3.88e-12!76;CL:0000860!4.49e-12!45;CL:0000557!1.45e-10!71;CL:0000763!3.96e-10!112;CL:0000049!3.96e-10!112;CL:0000945!9.09e-10!24;CL:0000826!9.09e-10!24;CL:0002009!1.12e-09!65;CL:0000625!4.75e-09!11;CL:0000839!5.28e-09!70;CL:0002194!7.08e-09!63;CL:0000576!7.08e-09!63;CL:0000040!7.08e-09!63;CL:0000559!7.08e-09!63;CL:0000236!5.12e-08!14;CL:0000451!7.02e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.61e-18;18!CL:0000789;1.61e-18;18!CL:0002419;1.61e-18;18!CL:0000084;2.59e-17;25!CL:0000542;2.18e-16;53!CL:0000625;5.22e-12;11!CL:0002087;1.00e-11;104!CL:0000945;2.05e-09;24!CL:0000738;4.31e-09;136!CL:0000236;9.47e-09;13!CL:0000451;1.10e-08;10!CL:0000624;2.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.02e-45,136;CL:0002087,2.89e-36,115;CL:0000037,2.10e-35,168;CL:0000988,1.83e-34,177;CL:0002031,3.84e-32,120;CL:0002032,4.33e-31,161;CL:0000837,4.33e-31,161;CL:0000542,1.25e-28,53;CL:0000051,1.25e-28,53;CL:0000838,2.37e-28,52;CL:0000791,1.79e-18,18;CL:0000789,1.79e-18,18;CL:0002420,1.79e-18,18;CL:0002419,1.79e-18,18;CL:0000790,1.79e-18,18;CL:0000084,1.74e-17,25;CL:0000827,1.74e-17,25;CL:0000625,5.40e-12,11;CL:0000860,1.22e-11,42;CL:0002057,1.22e-11,42;CL:0000766,2.76e-11,72;CL:0000945,1.19e-09,24;CL:0000826,1.19e-09,24;CL:0002009,1.28e-09,61;CL:0000236,1.45e-09,14;CL:0000557,3.38e-09,67;CL:0000473,5.38e-09,48;CL:0000234,5.38e-09,48;CL:0000451,5.59e-09,10;CL:0000763,1.02e-08,108;CL:0000049,1.02e-08,108;CL:0002194,1.28e-08,59;CL:0000576,1.28e-08,59;CL:0000040,1.28e-08,59;CL:0000559,1.28e-08,59;CL:0000624,2.31e-07,6;CL:0000839,2.38e-07,66;CL:0000990,5.35e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.61e-18;18!CL:0000051;2.18e-16;53!CL:0002057;3.09e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-20!115;UBERON:0002390!7.22e-17!102;UBERON:0003061!7.22e-17!102;UBERON:0002193!5.10e-14!112;UBERON:0001049!2.24e-10!57;UBERON:0005068!2.24e-10!57;UBERON:0006241!2.24e-10!57;UBERON:0007135!2.24e-10!57;UBERON:0001893!7.23e-10!34;UBERON:0002020!7.43e-10!34;UBERON:0003528!7.43e-10!34;UBERON:0002791!1.47e-09!33;UBERON:0003080!1.91e-09!42;UBERON:0002780!3.26e-09!41;UBERON:0001890!3.26e-09!41;UBERON:0006240!3.26e-09!41;UBERON:0001869!4.30e-09!32;UBERON:0000178!1.05e-08!15;UBERON:0000179!1.05e-08!15;UBERON:0000463!1.05e-08!15;UBERON:0002371!3.10e-08!80;UBERON:0002619!6.75e-08!22;UBERON:0001950!1.12e-07!20;UBERON:0002616!2.99e-07!59;UBERON:0001474!6.29e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!3.61e-20!115;UBERON:0002390!7.22e-17!102;UBERON:0003061!7.22e-17!102;UBERON:0002193!5.10e-14!112;UBERON:0001049!2.24e-10!57;UBERON:0005068!2.24e-10!57;UBERON:0006241!2.24e-10!57;UBERON:0007135!2.24e-10!57;UBERON:0001893!7.23e-10!34;UBERON:0002020!7.43e-10!34;UBERON:0003528!7.43e-10!34;UBERON:0002791!1.47e-09!33;UBERON:0003080!1.91e-09!42;UBERON:0002780!3.26e-09!41;UBERON:0001890!3.26e-09!41;UBERON:0006240!3.26e-09!41;UBERON:0001869!4.30e-09!32;UBERON:0000178!1.05e-08!15;UBERON:0000179!1.05e-08!15;UBERON:0000463!1.05e-08!15;UBERON:0002371!3.10e-08!80;UBERON:0002619!6.75e-08!22;UBERON:0001950!1.12e-07!20;UBERON:0002616!2.99e-07!59;UBERON:0001474!6.29e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-11;15!UBERON:0000179;1.57e-11;15!UBERON:0000463;1.57e-11;15!UBERON:0001893;8.74e-09;34!UBERON:0003528;3.34e-08;34!UBERON:0002020;3.34e-08;34!UBERON:0002791;4.91e-08;32!UBERON:0001869;6.14e-08;32!UBERON:0002390;7.17e-08;32!UBERON:0002780;1.38e-07;41!UBERON:0001890;1.38e-07;41!UBERON:0001950;4.11e-07;20!UBERON:0002619;6.90e-07;22 | |||
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| ||
|short_description=p3@ARAP2 | |short_description=p3@ARAP2 | ||
}} | }} |
Latest revision as of 14:48, 17 September 2015
Short description: | p3@ARAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARAP2_5end |
Coexpression cluster: | C1522_CD8_Natural_CD4_Basophils_thymus_Peripheral_CD19 |
Association with transcript: | -6bp_to_NM_015230, uc003gsq.1_5end |
EntrezGene: | ARAP2 |
HGNC: | 16924 |
UniProt: | A7E2A5Q8WZ64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.19e-18 | 98 |
blood island | 4.19e-18 | 98 |
adult organism | 3.88e-16 | 114 |
hemolymphoid system | 3.98e-16 | 108 |
blood | 1.64e-11 | 15 |
haemolymphatic fluid | 1.64e-11 | 15 |
organism substance | 1.64e-11 | 15 |
neural tube | 2.97e-11 | 56 |
neural rod | 2.97e-11 | 56 |
future spinal cord | 2.97e-11 | 56 |
neural keel | 2.97e-11 | 56 |
regional part of forebrain | 4.20e-10 | 41 |
forebrain | 4.20e-10 | 41 |
anterior neural tube | 4.20e-10 | 41 |
future forebrain | 4.20e-10 | 41 |
telencephalon | 5.23e-10 | 34 |
brain grey matter | 5.40e-10 | 34 |
gray matter | 5.40e-10 | 34 |
regional part of nervous system | 6.23e-10 | 53 |
regional part of brain | 6.23e-10 | 53 |
immune system | 3.07e-09 | 93 |
regional part of telencephalon | 3.95e-09 | 32 |
cerebral hemisphere | 5.22e-09 | 32 |
bone marrow | 2.34e-07 | 76 |
neocortex | 2.81e-07 | 20 |
brain | 3.81e-07 | 68 |
future brain | 3.81e-07 | 68 |
hemopoietic organ | 5.20e-07 | 7 |
immune organ | 5.20e-07 | 7 |
central nervous system | 5.61e-07 | 81 |
regional part of cerebral cortex | 5.74e-07 | 22 |