FFCP PHASE1:Hg19::chr6:161695185..161695199,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56895 | |EntrezGene=56895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20885 | |HGNC=20885 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRZ5 | |UniProt=Q9NRZ5 | ||
|association_with_transcript=-78bp_to_NM_020133,uc003qtr.1,uc003qts.1,uc011egb.1,uc011egc.1,uc011egd.1,uc011ege.1_5end | |association_with_transcript=-78bp_to_NM_020133,uc003qtr.1,uc003qts.1,uc011egb.1,uc011egc.1,uc011egd.1,uc011ege.1_5end | ||
|cluster_id=chr6:161695185..161695199,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_AGPAT4_5end | |description=CAGE_peak_5_at_AGPAT4_5end | ||
|id=chr6:161695185..161695199,- | |id=chr6:161695185..161695199,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.72e-27;3!UBERON:0003057;2.72e-27;3!UBERON:0005425;1.53e-21;1!UBERON:0006601;4.50e-09;82!UBERON:0003056;4.52e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.30e-34!57;UBERON:0005068!2.30e-34!57;UBERON:0006241!2.30e-34!57;UBERON:0007135!2.30e-34!57;UBERON:0001017!8.79e-32!82;UBERON:0005743!2.84e-31!86;UBERON:0000073!1.91e-30!94;UBERON:0001016!1.91e-30!94;UBERON:0000955!1.92e-29!69;UBERON:0006238!1.92e-29!69;UBERON:0002616!2.56e-28!59;UBERON:0002780!6.99e-26!41;UBERON:0001890!6.99e-26!41;UBERON:0006240!6.99e-26!41;UBERON:0003080!4.31e-25!42;UBERON:0001893!1.34e-24!34;UBERON:0002020!1.56e-24!34;UBERON:0003528!1.56e-24!34;UBERON:0002791!4.62e-23!33;UBERON:0007023!3.41e-22!115;UBERON:0003075!8.73e-22!86;UBERON:0007284!8.73e-22!86;UBERON:0001869!2.98e-21!32;UBERON:0002346!2.42e-20!90;UBERON:0002619!3.65e-18!22;UBERON:0001950!6.80e-18!20;UBERON:0003056!2.86e-16!61;UBERON:0004121!1.11e-15!169;UBERON:0000956!1.49e-15!25;UBERON:0000203!1.49e-15!25;UBERON:0000924!5.15e-15!173;UBERON:0006601!5.15e-15!173;UBERON:0000033!6.68e-14!123;UBERON:0000153!1.11e-13!129;UBERON:0007811!1.11e-13!129;UBERON:0002298!3.34e-13!8;UBERON:0002308!5.78e-11!9;UBERON:0000125!5.78e-11!9;UBERON:0003076!2.74e-10!15;UBERON:0003057!2.74e-10!15;UBERON:0004732!1.53e-09!13;UBERON:0002420!3.98e-08!9;UBERON:0007245!3.98e-08!9;UBERON:0010009!3.98e-08!9;UBERON:0010011!3.98e-08!9;UBERON:0000454!3.98e-08!9;UBERON:0000200!5.00e-08!6;UBERON:0004733!6.54e-08!12;UBERON:0002028!6.54e-08!12;UBERON:0007277!6.54e-08!12;UBERON:0001896!1.38e-07!3;UBERON:0005290!1.38e-07!3;UBERON:0010096!1.38e-07!3;UBERON:0009663!1.62e-07!7;UBERON:0006331!1.97e-07!3;UBERON:0000988!2.33e-07!3;UBERON:0000025!4.79e-07!194;UBERON:0002021!5.65e-07!5;UBERON:0001872!6.40e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!2.30e-34!57;UBERON:0005068!2.30e-34!57;UBERON:0006241!2.30e-34!57;UBERON:0007135!2.30e-34!57;UBERON:0001017!8.79e-32!82;UBERON:0005743!2.84e-31!86;UBERON:0000073!1.91e-30!94;UBERON:0001016!1.91e-30!94;UBERON:0000955!1.92e-29!69;UBERON:0006238!1.92e-29!69;UBERON:0002616!2.56e-28!59;UBERON:0002780!6.99e-26!41;UBERON:0001890!6.99e-26!41;UBERON:0006240!6.99e-26!41;UBERON:0003080!4.31e-25!42;UBERON:0001893!1.34e-24!34;UBERON:0002020!1.56e-24!34;UBERON:0003528!1.56e-24!34;UBERON:0002791!4.62e-23!33;UBERON:0007023!3.41e-22!115;UBERON:0003075!8.73e-22!86;UBERON:0007284!8.73e-22!86;UBERON:0001869!2.98e-21!32;UBERON:0002346!2.42e-20!90;UBERON:0002619!3.65e-18!22;UBERON:0001950!6.80e-18!20;UBERON:0003056!2.86e-16!61;UBERON:0004121!1.11e-15!169;UBERON:0000956!1.49e-15!25;UBERON:0000203!1.49e-15!25;UBERON:0000924!5.15e-15!173;UBERON:0006601!5.15e-15!173;UBERON:0000033!6.68e-14!123;UBERON:0000153!1.11e-13!129;UBERON:0007811!1.11e-13!129;UBERON:0002298!3.34e-13!8;UBERON:0002308!5.78e-11!9;UBERON:0000125!5.78e-11!9;UBERON:0003076!2.74e-10!15;UBERON:0003057!2.74e-10!15;UBERON:0004732!1.53e-09!13;UBERON:0002420!3.98e-08!9;UBERON:0007245!3.98e-08!9;UBERON:0010009!3.98e-08!9;UBERON:0010011!3.98e-08!9;UBERON:0000454!3.98e-08!9;UBERON:0000200!5.00e-08!6;UBERON:0004733!6.54e-08!12;UBERON:0002028!6.54e-08!12;UBERON:0007277!6.54e-08!12;UBERON:0001896!1.38e-07!3;UBERON:0005290!1.38e-07!3;UBERON:0010096!1.38e-07!3;UBERON:0009663!1.62e-07!7;UBERON:0006331!1.97e-07!3;UBERON:0000988!2.33e-07!3;UBERON:0000025!4.79e-07!194;UBERON:0002021!5.65e-07!5;UBERON:0001872!6.40e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;8.95e-41;2!UBERON:0000122;8.95e-41;2!UBERON:0002240;2.72e-27;3!UBERON:0005174;2.72e-27;3!UBERON:0001137;2.72e-27;3!UBERON:0000941;1.53e-21;1!UBERON:0001785;1.53e-21;1!UBERON:0002464;1.53e-21;1!UBERON:0004904;1.53e-21;1!UBERON:0001021;1.53e-21;1!UBERON:0002336;4.22e-21;1!UBERON:0002038;4.22e-21;1!UBERON:0011215;4.22e-21;1!UBERON:0001018;4.22e-21;1!UBERON:0009661;4.22e-21;1!UBERON:0002950;4.22e-21;1!UBERON:0002473;4.22e-21;1!UBERON:0005340;4.22e-21;1!UBERON:0003544;4.22e-21;1!UBERON:0005970;4.22e-21;1!UBERON:0002316;4.22e-21;1!UBERON:0001020;4.22e-21;1!UBERON:0001891;4.22e-21;1!UBERON:0002437;4.22e-21;1!UBERON:0003714;1.82e-11;2!UBERON:0001897;3.02e-11;2!UBERON:0010225;3.02e-11;2!UBERON:0001896;6.34e-08;3!UBERON:0005290;6.34e-08;3!UBERON:0004732;4.13e-07;13!UBERON:0000489;8.94e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,5.99e-41,2;UBERON:0000122,5.99e-41,2;UBERON:0002240,3.56e-27,3;UBERON:0005174,3.56e-27,3;UBERON:0001137,3.56e-27,3;UBERON:0000941,1.53e-21,1;UBERON:0001785,1.53e-21,1;UBERON:0002464,1.53e-21,1;UBERON:0004904,1.53e-21,1;UBERON:0001021,1.53e-21,1;UBERON:0003902,1.53e-21,1;UBERON:0005425,1.53e-21,1;UBERON:0002336,2.82e-21,1;UBERON:0011215,2.82e-21,1;UBERON:0001018,2.82e-21,1;UBERON:0002473,2.82e-21,1;UBERON:0005340,2.82e-21,1;UBERON:0003544,2.82e-21,1;UBERON:0005970,2.82e-21,1;UBERON:0002316,2.82e-21,1;UBERON:0001020,2.82e-21,1;UBERON:0002437,2.82e-21,1;UBERON:0002038,9.43e-21,1;UBERON:0009661,9.43e-21,1;UBERON:0002950,9.43e-21,1;UBERON:0001891,9.43e-21,1;UBERON:0009616,9.43e-21,1;UBERON:0010286,9.43e-21,1;UBERON:0003076,1.41e-12,15;UBERON:0003057,1.41e-12,15;UBERON:0001049,1.81e-12,56;UBERON:0005068,1.81e-12,56;UBERON:0006241,1.81e-12,56;UBERON:0007135,1.81e-12,56;UBERON:0003075,1.60e-11,82;UBERON:0007284,1.60e-11,82;UBERON:0003714,1.82e-11,2;UBERON:0001897,2.23e-11,2;UBERON:0010225,2.23e-11,2;UBERON:0002346,5.57e-11,86;UBERON:0001016,2.28e-10,89;UBERON:0010371,4.75e-09,104;UBERON:0001017,1.57e-08,81;UBERON:0007023,2.61e-08,114;UBERON:0001896,4.84e-08,3;UBERON:0005290,4.84e-08,3;UBERON:0010096,4.84e-08,3;UBERON:0004732,3.65e-07,13;UBERON:0010314,4.50e-07,132 | |||
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|short_description=p5@AGPAT4 | |short_description=p5@AGPAT4 | ||
}} | }} |
Latest revision as of 17:18, 16 September 2015
Short description: | p5@AGPAT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AGPAT4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -78bp_to_NM_020133, uc003qtr.1, uc003qts.1, uc011egb.1, uc011egc.1, uc011egd.1, uc011ege.1_5end |
EntrezGene: | AGPAT4 |
HGNC: | 20885 |
UniProt: | Q9NRZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data