FFCP PHASE1:Hg19::chr17:30186328..30186351,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:30186328..30186351,-
|short_description=p4@C17orf79
|description=CAGE_peak_4_at_C17orf79_5end
|association_with_transcript=-2bp_to_NM_018405,uc002hgp.2,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55352 | |EntrezGene=55352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28848 | |HGNC=28848 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ92 | |UniProt=Q9NQ92 | ||
|association_with_transcript=-2bp_to_NM_018405,uc002hgp.2,uc010css.2_5end | |||
|cluster_id=chr17:30186328..30186351,- | |||
|description=CAGE_peak_4_at_C17orf79_5end | |||
|id=chr17:30186328..30186351,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.74e-18!94;UBERON:0001016!1.74e-18!94;UBERON:0002346!2.25e-18!90;UBERON:0005743!6.86e-18!86;UBERON:0003075!2.62e-17!86;UBERON:0007284!2.62e-17!86;UBERON:0001017!3.77e-17!82;UBERON:0001049!4.13e-17!57;UBERON:0005068!4.13e-17!57;UBERON:0006241!4.13e-17!57;UBERON:0007135!4.13e-17!57;UBERON:0000955!1.37e-16!69;UBERON:0006238!1.37e-16!69;UBERON:0001869!1.49e-16!32;UBERON:0000924!2.09e-16!173;UBERON:0006601!2.09e-16!173;UBERON:0002020!8.09e-16!34;UBERON:0003528!8.09e-16!34;UBERON:0003056!1.09e-15!61;UBERON:0003080!1.20e-15!42;UBERON:0002780!1.37e-15!41;UBERON:0001890!1.37e-15!41;UBERON:0006240!1.37e-15!41;UBERON:0004121!1.93e-15!169;UBERON:0002616!2.04e-15!59;UBERON:0001893!2.61e-15!34;UBERON:0002791!1.12e-14!33;UBERON:0001950!2.90e-13!20;UBERON:0002619!3.46e-13!22;UBERON:0000956!1.00e-12!25;UBERON:0000203!1.00e-12!25;UBERON:0000033!4.13e-12!123;UBERON:0000153!1.11e-11!129;UBERON:0007811!1.11e-11!129;UBERON:0000064!5.62e-09!219;UBERON:0000475!6.44e-09!365;UBERON:0000119!3.69e-07!312;UBERON:0000483!4.33e-07!309;UBERON:0000481!7.29e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.86e-17;32!UBERON:0002791;1.30e-15;32!UBERON:0003528;1.34e-15;34!UBERON:0002020;1.34e-15;34!UBERON:0001950;2.26e-15;20!UBERON:0001893;8.60e-15;34!UBERON:0002619;8.73e-15;22!UBERON:0000956;4.01e-14;25!UBERON:0000203;4.01e-14;25!UBERON:0002780;2.13e-12;41!UBERON:0001890;2.13e-12;41!UBERON:0000073;4.04e-10;53!UBERON:0002616;4.04e-10;53!UBERON:0000955;9.86e-09;68!UBERON:0001017;1.10e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.20e-19,86;UBERON:0000073,7.13e-19,53;UBERON:0002616,7.13e-19,53;UBERON:0001049,1.83e-18,56;UBERON:0005068,1.83e-18,56;UBERON:0006241,1.83e-18,56;UBERON:0007135,1.83e-18,56;UBERON:0001869,2.04e-18,32;UBERON:0010371,9.30e-18,104;UBERON:0003075,1.03e-17,82;UBERON:0007284,1.03e-17,82;UBERON:0003528,1.50e-17,34;UBERON:0002020,1.50e-17,34;UBERON:0002780,1.16e-16,41;UBERON:0001890,1.16e-16,41;UBERON:0003080,1.16e-16,41;UBERON:0006240,1.16e-16,41;UBERON:0000955,1.16e-16,68;UBERON:0006238,1.16e-16,68;UBERON:0002791,1.24e-16,32;UBERON:0003056,1.48e-16,61;UBERON:0001017,1.81e-16,81;UBERON:0001893,2.11e-16,34;UBERON:0001016,4.63e-16,89;UBERON:0001950,2.96e-15,20;UBERON:0002619,1.12e-14,22;UBERON:0000956,5.86e-14,25;UBERON:0000203,5.86e-14,25;UBERON:0004121,9.22e-14,171;UBERON:0000924,9.22e-14,171;UBERON:0006601,9.22e-14,171;UBERON:0010314,1.53e-13,132 | |||
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| ||
|short_description=p4@C17orf79 | |||
}} | }} |
Latest revision as of 11:54, 19 September 2015
Short description: | p4@C17orf79 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C17orf79_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_NM_018405, uc002hgp.2, uc010css.2_5end |
EntrezGene: | C17orf79 |
HGNC: | 28848 |
UniProt: | Q9NQ92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 6.20e-19 | 86 |
regional part of nervous system | 7.13e-19 | 53 |
regional part of brain | 7.13e-19 | 53 |
neural tube | 1.83e-18 | 56 |
neural rod | 1.83e-18 | 56 |
future spinal cord | 1.83e-18 | 56 |
neural keel | 1.83e-18 | 56 |
cerebral hemisphere | 2.04e-18 | 32 |
ecto-epithelium | 9.30e-18 | 104 |
neural plate | 1.03e-17 | 82 |
presumptive neural plate | 1.03e-17 | 82 |
brain grey matter | 1.50e-17 | 34 |
gray matter | 1.50e-17 | 34 |
regional part of forebrain | 1.16e-16 | 41 |
forebrain | 1.16e-16 | 41 |
anterior neural tube | 1.16e-16 | 41 |
future forebrain | 1.16e-16 | 41 |
brain | 1.16e-16 | 68 |
future brain | 1.16e-16 | 68 |
regional part of telencephalon | 1.24e-16 | 32 |
pre-chordal neural plate | 1.48e-16 | 61 |
central nervous system | 1.81e-16 | 81 |
telencephalon | 2.11e-16 | 34 |
nervous system | 4.63e-16 | 89 |
neocortex | 2.96e-15 | 20 |
regional part of cerebral cortex | 1.12e-14 | 22 |
cerebral cortex | 5.86e-14 | 25 |
pallium | 5.86e-14 | 25 |
ectoderm-derived structure | 9.22e-14 | 171 |
ectoderm | 9.22e-14 | 171 |
presumptive ectoderm | 9.22e-14 | 171 |
structure with developmental contribution from neural crest | 1.53e-13 | 132 |