FFCP PHASE1:Hg19::chr15:99645277..99645292,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23336 | |EntrezGene=23336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24466 | |HGNC=24466 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIE4,O15061 | |UniProt=C9JIE4,O15061 | ||
|association_with_transcript=0bp_to_ENST00000328642,ENST00000336292,ENST00000558420,ENST00000561306,NM_015286,NM_145728,uc002buo.2,uc002bup.2,uc002buq.2_5end | |association_with_transcript=0bp_to_ENST00000328642,ENST00000336292,ENST00000558420,ENST00000561306,NM_015286,NM_145728,uc002buo.2,uc002bup.2,uc002buq.2_5end | ||
|cluster_id=chr15:99645277..99645292,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_1_at_SYNM_5end | |description=CAGE_peak_1_at_SYNM_5end | ||
|id=chr15:99645277..99645292,+ | |id=chr15:99645277..99645292,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.51e-10;82!UBERON:0002532;3.90e-07;206!UBERON:0010316;3.90e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.59e-47!115;UBERON:0001017!1.72e-26!82;UBERON:0005743!4.22e-26!86;UBERON:0001049!6.57e-26!57;UBERON:0005068!6.57e-26!57;UBERON:0006241!6.57e-26!57;UBERON:0007135!6.57e-26!57;UBERON:0000073!4.59e-25!94;UBERON:0001016!4.59e-25!94;UBERON:0000955!2.92e-24!69;UBERON:0006238!2.92e-24!69;UBERON:0002616!9.44e-24!59;UBERON:0003075!1.17e-22!86;UBERON:0007284!1.17e-22!86;UBERON:0002346!2.56e-20!90;UBERON:0003080!1.33e-19!42;UBERON:0002780!4.87e-19!41;UBERON:0001890!4.87e-19!41;UBERON:0006240!4.87e-19!41;UBERON:0000153!5.35e-18!129;UBERON:0007811!5.35e-18!129;UBERON:0000033!7.11e-18!123;UBERON:0004121!7.25e-18!169;UBERON:0000924!1.49e-16!173;UBERON:0006601!1.49e-16!173;UBERON:0000477!3.63e-16!286;UBERON:0002020!1.45e-15!34;UBERON:0003528!1.45e-15!34;UBERON:0001893!1.54e-15!34;UBERON:0003056!1.88e-15!61;UBERON:0002791!4.97e-15!33;UBERON:0001869!2.31e-14!32;UBERON:0004111!1.87e-12!241;UBERON:0000475!4.29e-12!365;UBERON:0000468!1.18e-11!659;UBERON:0000481!1.19e-11!347;UBERON:0000956!3.69e-11!25;UBERON:0000203!3.69e-11!25;UBERON:0000025!1.04e-10!194;UBERON:0002619!4.77e-10!22;UBERON:0000467!7.53e-10!625;UBERON:0000480!1.26e-09!626;UBERON:0000062!1.89e-09!511;UBERON:0001950!2.95e-09!20;UBERON:0000064!3.46e-08!219;UBERON:0000922!9.64e-08!612;UBERON:0002050!1.58e-07!605;UBERON:0005423!1.58e-07!605;UBERON:0003076!1.75e-07!15;UBERON:0003057!1.75e-07!15;UBERON:0000923!1.83e-07!604;UBERON:0005291!1.83e-07!604;UBERON:0006598!1.83e-07!604;UBERON:0002532!1.83e-07!604;UBERON:0000119!2.57e-07!312;UBERON:0000483!5.40e-07!309 | |ontology_enrichment_uberon=UBERON:0007023!8.59e-47!115;UBERON:0001017!1.72e-26!82;UBERON:0005743!4.22e-26!86;UBERON:0001049!6.57e-26!57;UBERON:0005068!6.57e-26!57;UBERON:0006241!6.57e-26!57;UBERON:0007135!6.57e-26!57;UBERON:0000073!4.59e-25!94;UBERON:0001016!4.59e-25!94;UBERON:0000955!2.92e-24!69;UBERON:0006238!2.92e-24!69;UBERON:0002616!9.44e-24!59;UBERON:0003075!1.17e-22!86;UBERON:0007284!1.17e-22!86;UBERON:0002346!2.56e-20!90;UBERON:0003080!1.33e-19!42;UBERON:0002780!4.87e-19!41;UBERON:0001890!4.87e-19!41;UBERON:0006240!4.87e-19!41;UBERON:0000153!5.35e-18!129;UBERON:0007811!5.35e-18!129;UBERON:0000033!7.11e-18!123;UBERON:0004121!7.25e-18!169;UBERON:0000924!1.49e-16!173;UBERON:0006601!1.49e-16!173;UBERON:0000477!3.63e-16!286;UBERON:0002020!1.45e-15!34;UBERON:0003528!1.45e-15!34;UBERON:0001893!1.54e-15!34;UBERON:0003056!1.88e-15!61;UBERON:0002791!4.97e-15!33;UBERON:0001869!2.31e-14!32;UBERON:0004111!1.87e-12!241;UBERON:0000475!4.29e-12!365;UBERON:0000468!1.18e-11!659;UBERON:0000481!1.19e-11!347;UBERON:0000956!3.69e-11!25;UBERON:0000203!3.69e-11!25;UBERON:0000025!1.04e-10!194;UBERON:0002619!4.77e-10!22;UBERON:0000467!7.53e-10!625;UBERON:0000480!1.26e-09!626;UBERON:0000062!1.89e-09!511;UBERON:0001950!2.95e-09!20;UBERON:0000064!3.46e-08!219;UBERON:0000922!9.64e-08!612;UBERON:0002050!1.58e-07!605;UBERON:0005423!1.58e-07!605;UBERON:0003076!1.75e-07!15;UBERON:0003057!1.75e-07!15;UBERON:0000923!1.83e-07!604;UBERON:0005291!1.83e-07!604;UBERON:0006598!1.83e-07!604;UBERON:0002532!1.83e-07!604;UBERON:0000119!2.57e-07!312;UBERON:0000483!5.40e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.86e-15;41!UBERON:0001890;3.86e-15;41!UBERON:0000073;4.23e-15;53!UBERON:0002616;4.23e-15;53!UBERON:0003528;9.52e-15;34!UBERON:0002020;9.52e-15;34!UBERON:0001893;9.68e-15;34!UBERON:0002791;2.41e-14;32!UBERON:0001869;2.78e-14;32!UBERON:0007023;7.65e-14;114!UBERON:0000956;5.65e-12;25!UBERON:0000203;5.65e-12;25!UBERON:0001017;1.38e-11;75!UBERON:0000955;4.67e-11;68!UBERON:0002619;1.13e-10;22!UBERON:0001016;2.31e-10;83!UBERON:0001950;9.60e-10;20!UBERON:0004732;6.63e-07;13 | |||
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|phase1_expression=1.09007027562334,3.21150785836475,2.25527046553554,1.0007329835313,7.59833860526389,0.872338524100369,7.59899634504932,0,4.44015567939725,0.245733936501509,0,0.436882744260345,0,3.83675694176145,1.98838425436749,0,1.20538905604795,2.19093027116212,0.975865597581014,2.21617904538218,0.612002073732759,2.5076377718247,8.5870796139317,6.98059567871709,11.0477522843426,0,0,0,0,0.383829398097213,0.77408061658038,0,0,0,0,0,0,1.10799081706375,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0.619412741790207,0.28769239232215,0,0.236482229888585,1.03423704220986,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0.205601498999509,0,0.651844533267181,1.89379122293893,3.89653456815823,0.111410456885174,0,0,0,0.128091319725675,0,0,0.276350017785848,0,1.18629250529648,2.67540828089713,1.04535523804977,0,0,2.74901956386104,2.27717722817553,0.637130828648193,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,4.03213486449465,0,1.59306844271079,0,0.670700859703636,0.383587685530591,3.61439152384566,4.51204119572301,5.06962816362883,2.3858578411533,4.86634870302636,8.60266836193017,4.43458794925128,4.3917392846563,8.71010852059789,0,0,0,0,0,0.238490624305342,0,0,0.596287222100115,0,1.38856200643038,1.69592382577203,0.838998872419812,0.825354125820202,1.46296476575767,7.23566925674121,3.20189636418039,4.01664735317604,3.62546385398232,3.80136052859256,4.39311703586705,0,0.81014194788176,1.96459402224975,1.12264686313085,1.91439516821648,0,0,0.916008719652036,0,0,0,2.48485975847659,1.8994576749687,0.529636723252875,0.573673241497627,0.354668382198357,0.560677600142307,0,1.48000529050296,0.311211035399766,0.269421344139376,0.163461903113459,2.4217188423189,1.72852777344,0,0,0,0,0.352303495931295,0.485618833104395,0,1.22492502752936,0.859840221182376,2.06651562351531,2.37600571456411,1.48360157567134,0.910161361938026,0,2.18836948140286,1.7516592782075,1.10825646193673,2.19488810440419,3.67785354958824,3.00476117813194,0.567160915800105,5.02290979928813,0.427114777637135,0.211931901159562,1.20036438433761,0,1.28820270022815,0,4.55696097051419,0.389748020644795,2.01947019395292,0.368199594569197,0.646584227275248,1.06502877754984,0.806016785821122,1.01736355386293,0,0,0,0.731842236777572,0.265059536642971,0.69716365721711,0.414644220061482,0,1.45990943630332,0,1.28648187638577,1.38134921352481,0.464367928031979,0,1.53798840051797,3.03452442140583,2.41011029883482,2.86764329104224,2.17879444092406,1.66089433377768,2.69662616320329,1.96221465125346,1.15424147083917,0,1.40241773803446,0,0,2.53510069643662,1.96565443335525,2.36315962672562,0,0.860919069801795,1.02940686179115,3.18275827685014,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,17.0417695313363,0.587043471179108,1.87676382089396,2.31492756288305,1.90254152234598,0,3.43394464837949,0,0,0,0,0.335964256397719,0,0.179117045405697,0,0.766765358330422,0,0,0.207328115540772,0,0.25248486685276,0.444485260045183,0.381988425558278,0,0,1.43958489784653,0.600686115687835,0.857479297891735,1.90622843387113,4.3596006883328,1.54010400223995,3.74887975697556,0,0,0,0,0,2.83698264046557,0,2.43062589218851,9.76718889704597,0.823240336780769,0,1.77695974371273,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,4.79249710983165,2.29723871668228,0,0.289562613335158,0.410952645100767,0.179060963239896,0,2.56139988262505,0,0.898401253958239,60.2204259407238,11.712586847186,0.773288812777695,4.18790663335872,0.637938751653163,0,2.99161459204025,0,2.57652132610194,1.50051156317903,0.271265023699736,1.03985430765404,1.07057393278297,1.10391690523754,0.585707074963566,1.50473049863859,0,2.0694614258501,0.664225598535437,1.84369168541703,0.695068915744663,1.37060810223918,2.05886054286514,1.03384013061444,0.647142602455851,2.45473382947922,0,0,0.30239029332968,0.248107807818777,8.13348458426731,2.52594084989766,0.768834895534206,1.02341449813341,4.50390979202101,1.48418066444991,1.07946785661859,0,0.328508624055237,0,0.232420756919918,0.725156697549733,0,0.184161977871793,1.26295892981067,0.728364672026868,0.786746489756545,0.451199612907412,0.462092022626489,1.56869953835371,0,0.73886140225013,2.27466768141793,0.680374821106063,1.51141141271498,0,0.541892875087706,0,1.01950509218015,0.831076008928724,0.223874754722178,0.219259876645935,0,6.66770325302612,0.328014645699706,0,10.2010601531245,4.94475110019054,4.95056999523528,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.429680979473094,0.145016693914229,0.340906509664404,0.356128142586949,0,0.384380134730212,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0.74129687641568,0.429374660225974,11.9090678195094,0.316379424718726,0.571890581771475,0,0,0,0.78494864019923,0,0.274537029736055,1.06031162111118,0.404364963146632,0,0,0.975267478179181,0,0,0.818999468447914,0.282810863907425,0,1.10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| ||
|short_description=p1@SYNM | |short_description=p1@SYNM | ||
}} | }} |
Latest revision as of 03:12, 20 September 2015
Short description: | p1@SYNM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYNM_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000328642, ENST00000336292, ENST00000558420, ENST00000561306, NM_015286, NM_145728, uc002buo.2, uc002bup.2, uc002buq.2_5end |
EntrezGene: | SYNM |
HGNC: | 24466 |
UniProt: | C9JIE4O15061 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data