FFCP PHASE1:Hg19::chr12:45307764..45307772,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4753 | |EntrezGene=4753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7751 | |HGNC=7751 | ||
|TSSclassifier=strong | |||
|UniProt=Q99435,B7Z2U7,B7Z9U3 | |UniProt=Q99435,B7Z2U7,B7Z9U3 | ||
|association_with_transcript=-53bp_to_ENST00000333837,NM_001145110,uc010sla.1_5end | |association_with_transcript=-53bp_to_ENST00000333837,NM_001145110,uc010sla.1_5end | ||
|cluster_id=chr12:45307764..45307772,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_16_at_NELL2_5end | |description=CAGE_peak_16_at_NELL2_5end | ||
|id=chr12:45307764..45307772,- | |id=chr12:45307764..45307772,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.87e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.02e-90!22;UBERON:0001950!2.09e-88!20;UBERON:0000956!6.63e-80!25;UBERON:0000203!6.63e-80!25;UBERON:0001869!2.36e-78!32;UBERON:0001893!1.10e-73!34;UBERON:0002791!6.85e-68!33;UBERON:0002020!7.36e-66!34;UBERON:0003528!7.36e-66!34;UBERON:0002780!7.57e-61!41;UBERON:0001890!7.57e-61!41;UBERON:0006240!7.57e-61!41;UBERON:0003080!2.36e-59!42;UBERON:0001049!7.46e-53!57;UBERON:0005068!7.46e-53!57;UBERON:0006241!7.46e-53!57;UBERON:0007135!7.46e-53!57;UBERON:0000955!1.49e-51!69;UBERON:0006238!1.49e-51!69;UBERON:0002616!5.70e-51!59;UBERON:0001017!4.37e-47!82;UBERON:0000200!1.90e-45!6;UBERON:0005743!9.10e-45!86;UBERON:0000073!3.00e-40!94;UBERON:0001016!3.00e-40!94;UBERON:0003056!4.03e-40!61;UBERON:0003075!1.35e-37!86;UBERON:0007284!1.35e-37!86;UBERON:0007023!2.17e-36!115;UBERON:0002346!8.91e-36!90;UBERON:0001871!3.23e-33!7;UBERON:0000033!2.81e-30!123;UBERON:0000153!1.05e-28!129;UBERON:0007811!1.05e-28!129;UBERON:0001872!1.62e-24!5;UBERON:0000349!9.70e-24!5;UBERON:0002771!1.45e-23!3;UBERON:0004121!6.12e-21!169;UBERON:0000924!2.27e-20!173;UBERON:0006601!2.27e-20!173;UBERON:0001870!1.01e-16!2;UBERON:0001876!8.50e-16!2;UBERON:0002021!8.51e-14!5;UBERON:0000025!4.63e-13!194;UBERON:0000064!3.91e-11!219;UBERON:0004111!9.13e-10!241;UBERON:0002702!3.06e-09!1;UBERON:0002022!4.52e-09!1;UBERON:0007190!4.89e-09!1;UBERON:0002581!6.65e-09!1;UBERON:0001882!7.75e-09!1;UBERON:0005403!7.75e-09!1;UBERON:0000477!1.33e-08!286;UBERON:0002902!1.42e-08!1;UBERON:0009899!1.42e-08!1;UBERON:0003112!1.53e-08!1;UBERON:0000032!1.53e-08!1;UBERON:0005253!1.53e-08!1;UBERON:0003128!1.53e-08!1;UBERON:0002241!1.53e-08!1;UBERON:0001703!1.53e-08!1;UBERON:0004761!1.53e-08!1;UBERON:0009617!1.53e-08!1;UBERON:0002420!5.53e-08!9;UBERON:0007245!5.53e-08!9;UBERON:0010009!5.53e-08!9;UBERON:0010011!5.53e-08!9;UBERON:0000454!5.53e-08!9;UBERON:0000483!1.10e-07!309;UBERON:0000119!1.43e-07!312;UBERON:0000475!1.57e-07!365 | |ontology_enrichment_uberon=UBERON:0002619!1.02e-90!22;UBERON:0001950!2.09e-88!20;UBERON:0000956!6.63e-80!25;UBERON:0000203!6.63e-80!25;UBERON:0001869!2.36e-78!32;UBERON:0001893!1.10e-73!34;UBERON:0002791!6.85e-68!33;UBERON:0002020!7.36e-66!34;UBERON:0003528!7.36e-66!34;UBERON:0002780!7.57e-61!41;UBERON:0001890!7.57e-61!41;UBERON:0006240!7.57e-61!41;UBERON:0003080!2.36e-59!42;UBERON:0001049!7.46e-53!57;UBERON:0005068!7.46e-53!57;UBERON:0006241!7.46e-53!57;UBERON:0007135!7.46e-53!57;UBERON:0000955!1.49e-51!69;UBERON:0006238!1.49e-51!69;UBERON:0002616!5.70e-51!59;UBERON:0001017!4.37e-47!82;UBERON:0000200!1.90e-45!6;UBERON:0005743!9.10e-45!86;UBERON:0000073!3.00e-40!94;UBERON:0001016!3.00e-40!94;UBERON:0003056!4.03e-40!61;UBERON:0003075!1.35e-37!86;UBERON:0007284!1.35e-37!86;UBERON:0007023!2.17e-36!115;UBERON:0002346!8.91e-36!90;UBERON:0001871!3.23e-33!7;UBERON:0000033!2.81e-30!123;UBERON:0000153!1.05e-28!129;UBERON:0007811!1.05e-28!129;UBERON:0001872!1.62e-24!5;UBERON:0000349!9.70e-24!5;UBERON:0002771!1.45e-23!3;UBERON:0004121!6.12e-21!169;UBERON:0000924!2.27e-20!173;UBERON:0006601!2.27e-20!173;UBERON:0001870!1.01e-16!2;UBERON:0001876!8.50e-16!2;UBERON:0002021!8.51e-14!5;UBERON:0000025!4.63e-13!194;UBERON:0000064!3.91e-11!219;UBERON:0004111!9.13e-10!241;UBERON:0002702!3.06e-09!1;UBERON:0002022!4.52e-09!1;UBERON:0007190!4.89e-09!1;UBERON:0002581!6.65e-09!1;UBERON:0001882!7.75e-09!1;UBERON:0005403!7.75e-09!1;UBERON:0000477!1.33e-08!286;UBERON:0002902!1.42e-08!1;UBERON:0009899!1.42e-08!1;UBERON:0003112!1.53e-08!1;UBERON:0000032!1.53e-08!1;UBERON:0005253!1.53e-08!1;UBERON:0003128!1.53e-08!1;UBERON:0002241!1.53e-08!1;UBERON:0001703!1.53e-08!1;UBERON:0004761!1.53e-08!1;UBERON:0009617!1.53e-08!1;UBERON:0002420!5.53e-08!9;UBERON:0007245!5.53e-08!9;UBERON:0010009!5.53e-08!9;UBERON:0010011!5.53e-08!9;UBERON:0000454!5.53e-08!9;UBERON:0000483!1.10e-07!309;UBERON:0000119!1.43e-07!312;UBERON:0000475!1.57e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000200;2.14e-84;6!UBERON:0001950;2.17e-66;20!UBERON:0002619;1.48e-60;22!UBERON:0000956;1.74e-53;25!UBERON:0000203;1.74e-53;25!UBERON:0001869;2.30e-53;32!UBERON:0001893;2.59e-48;34!UBERON:0002791;1.52e-45;32!UBERON:0001870;5.56e-44;3!UBERON:0003528;4.77e-41;34!UBERON:0002020;4.77e-41;34!UBERON:0002780;1.61e-31;41!UBERON:0001890;1.61e-31;41!UBERON:0002702;6.00e-30;2!UBERON:0002771;4.54e-29;2!UBERON:0001872;3.46e-26;5!UBERON:0000073;1.41e-21;53!UBERON:0002616;1.41e-21;53!UBERON:0001017;1.32e-17;75!UBERON:0002581;1.92e-15;1!UBERON:0001882;1.92e-15;1!UBERON:0002022;1.92e-15;1!UBERON:0007190;1.92e-15;1!UBERON:0005403;1.92e-15;1!UBERON:0000955;3.08e-15;68!UBERON:0001016;1.18e-12;83!UBERON:0001871;5.15e-09;6!UBERON:0002360;2.23e-08;2!UBERON:0000094;2.23e-08;2!UBERON:0010743;2.23e-08;2!UBERON:0007023;1.75e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,1.86e-84,6;UBERON:0001950,1.90e-66,20;UBERON:0002619,1.31e-60,22;UBERON:0001869,1.75e-60,32;UBERON:0001893,5.65e-57,34;UBERON:0000956,1.56e-53,25;UBERON:0000203,1.56e-53,25;UBERON:0002791,9.41e-51,32;UBERON:0003528,8.38e-48,34;UBERON:0002020,8.38e-48,34;UBERON:0002780,2.54e-47,41;UBERON:0001890,2.54e-47,41;UBERON:0003080,2.54e-47,41;UBERON:0006240,2.54e-47,41;UBERON:0001870,5.19e-44,3;UBERON:0000073,1.38e-36,53;UBERON:0002616,1.38e-36,53;UBERON:0001049,1.32e-34,56;UBERON:0005068,1.32e-34,56;UBERON:0006241,1.32e-34,56;UBERON:0007135,1.32e-34,56;UBERON:0000955,5.78e-33,68;UBERON:0006238,5.78e-33,68;UBERON:0001017,3.76e-32,81;UBERON:0003056,9.89e-32,61;UBERON:0002702,6.02e-30,2;UBERON:0002771,4.55e-29,2;UBERON:0001016,6.79e-29,89;UBERON:0001872,2.79e-26,5;UBERON:0003075,1.99e-23,82;UBERON:0007284,1.99e-23,82;UBERON:0002346,2.69e-22,86;UBERON:0007023,9.83e-20,114;UBERON:0010371,2.82e-18,104;UBERON:0002022,1.16e-15,1;UBERON:0007190,1.34e-15,1;UBERON:0002581,2.38e-15,1;UBERON:0001882,3.17e-15,1;UBERON:0005403,3.17e-15,1;UBERON:0004121,1.09e-14,171;UBERON:0000924,1.09e-14,171;UBERON:0006601,1.09e-14,171;UBERON:0010314,3.59e-14,132;UBERON:0011216,6.13e-11,223;UBERON:0000025,2.34e-09,192;UBERON:0001871,5.16e-09,6;UBERON:0002360,2.67e-08,2;UBERON:0000094,2.67e-08,2;UBERON:0010743,2.67e-08,2;UBERON:0004111,3.26e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.39152147242777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34249945036751,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.51873891645062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.34228891392159,2.003054891304,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,0,0.798169295285756,1.02558182120378,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48582686160468,0.781078098613847,1.86018116851066,2.21955335678674,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,1.18390992413128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.39152147242777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34249945036751,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.51873891645062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.34228891392159,2.003054891304,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,0,0.798169295285756,1.02558182120378,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48582686160468,0.781078098613847,1.86018116851066,2.21955335678674,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,1.18390992413128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747906392100062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@NELL2 | |short_description=p16@NELL2 | ||
}} | }} |
Latest revision as of 09:40, 18 September 2015
Short description: | p16@NELL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NELL2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -53bp_to_ENST00000333837, NM_001145110, uc010sla.1_5end |
EntrezGene: | NELL2 |
HGNC: | 7751 |
UniProt: | Q99435B7Z2U7B7Z9U3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data