FFCP PHASE1:Hg19::chr1:99729999..99730002,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9890 | |EntrezGene=9890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=99bp_to_uc001dse.2,uc010oue.1_5end | |association_with_transcript=99bp_to_uc001dse.2,uc010oue.1_5end | ||
|cluster_id=chr1:99729999..99730002,+ | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_6_at_LPPR4_5end | |description=CAGE_peak_6_at_LPPR4_5end | ||
|id=chr1:99729999..99730002,+ | |id=chr1:99729999..99730002,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.99e-45;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.60e-60!41;UBERON:0001890!2.60e-60!41;UBERON:0006240!2.60e-60!41;UBERON:0001893!2.34e-59!34;UBERON:0003080!1.04e-58!42;UBERON:0002791!1.78e-56!33;UBERON:0002020!1.22e-54!34;UBERON:0003528!1.22e-54!34;UBERON:0001869!1.67e-54!32;UBERON:0000955!6.27e-54!69;UBERON:0006238!6.27e-54!69;UBERON:0001049!1.19e-53!57;UBERON:0005068!1.19e-53!57;UBERON:0006241!1.19e-53!57;UBERON:0007135!1.19e-53!57;UBERON:0001017!2.28e-52!82;UBERON:0002616!1.52e-51!59;UBERON:0005743!1.73e-49!86;UBERON:0000073!1.34e-48!94;UBERON:0001016!1.34e-48!94;UBERON:0003056!7.94e-41!61;UBERON:0002619!3.14e-40!22;UBERON:0003075!4.12e-37!86;UBERON:0007284!4.12e-37!86;UBERON:0002346!4.74e-35!90;UBERON:0000956!5.20e-35!25;UBERON:0000203!5.20e-35!25;UBERON:0001950!1.06e-34!20;UBERON:0000033!2.99e-33!123;UBERON:0000153!3.18e-31!129;UBERON:0007811!3.18e-31!129;UBERON:0007023!7.89e-29!115;UBERON:0002420!3.88e-28!9;UBERON:0007245!3.88e-28!9;UBERON:0010009!3.88e-28!9;UBERON:0010011!3.88e-28!9;UBERON:0000454!3.88e-28!9;UBERON:0004121!1.16e-26!169;UBERON:0000924!8.64e-26!173;UBERON:0006601!8.64e-26!173;UBERON:0009663!4.27e-22!7;UBERON:0002308!1.41e-21!9;UBERON:0000125!1.41e-21!9;UBERON:0000349!1.65e-16!5;UBERON:0002021!6.09e-16!5;UBERON:0000369!5.60e-14!4;UBERON:0002435!5.60e-14!4;UBERON:0000204!5.60e-14!4;UBERON:0010082!5.60e-14!4;UBERON:0001871!1.40e-13!7;UBERON:0000064!2.66e-11!219;UBERON:0005383!4.79e-11!3;UBERON:0005382!4.79e-11!3;UBERON:0000475!7.17e-11!365;UBERON:0000025!1.59e-10!194;UBERON:0000200!2.56e-08!6;UBERON:0004111!4.09e-08!241;UBERON:0000062!6.08e-08!511;UBERON:0001873!6.91e-08!2;UBERON:0010122!6.91e-08!2;UBERON:0000477!8.34e-08!286;UBERON:0001876!9.56e-08!2;UBERON:0001954!1.65e-07!2;UBERON:0003022!1.65e-07!2;UBERON:0002421!1.65e-07!2;UBERON:0002600!1.65e-07!2;UBERON:0001875!1.99e-07!2;UBERON:0006514!1.99e-07!2;UBERON:0000481!8.18e-07!347 | |ontology_enrichment_uberon=UBERON:0002780!2.60e-60!41;UBERON:0001890!2.60e-60!41;UBERON:0006240!2.60e-60!41;UBERON:0001893!2.34e-59!34;UBERON:0003080!1.04e-58!42;UBERON:0002791!1.78e-56!33;UBERON:0002020!1.22e-54!34;UBERON:0003528!1.22e-54!34;UBERON:0001869!1.67e-54!32;UBERON:0000955!6.27e-54!69;UBERON:0006238!6.27e-54!69;UBERON:0001049!1.19e-53!57;UBERON:0005068!1.19e-53!57;UBERON:0006241!1.19e-53!57;UBERON:0007135!1.19e-53!57;UBERON:0001017!2.28e-52!82;UBERON:0002616!1.52e-51!59;UBERON:0005743!1.73e-49!86;UBERON:0000073!1.34e-48!94;UBERON:0001016!1.34e-48!94;UBERON:0003056!7.94e-41!61;UBERON:0002619!3.14e-40!22;UBERON:0003075!4.12e-37!86;UBERON:0007284!4.12e-37!86;UBERON:0002346!4.74e-35!90;UBERON:0000956!5.20e-35!25;UBERON:0000203!5.20e-35!25;UBERON:0001950!1.06e-34!20;UBERON:0000033!2.99e-33!123;UBERON:0000153!3.18e-31!129;UBERON:0007811!3.18e-31!129;UBERON:0007023!7.89e-29!115;UBERON:0002420!3.88e-28!9;UBERON:0007245!3.88e-28!9;UBERON:0010009!3.88e-28!9;UBERON:0010011!3.88e-28!9;UBERON:0000454!3.88e-28!9;UBERON:0004121!1.16e-26!169;UBERON:0000924!8.64e-26!173;UBERON:0006601!8.64e-26!173;UBERON:0009663!4.27e-22!7;UBERON:0002308!1.41e-21!9;UBERON:0000125!1.41e-21!9;UBERON:0000349!1.65e-16!5;UBERON:0002021!6.09e-16!5;UBERON:0000369!5.60e-14!4;UBERON:0002435!5.60e-14!4;UBERON:0000204!5.60e-14!4;UBERON:0010082!5.60e-14!4;UBERON:0001871!1.40e-13!7;UBERON:0000064!2.66e-11!219;UBERON:0005383!4.79e-11!3;UBERON:0005382!4.79e-11!3;UBERON:0000475!7.17e-11!365;UBERON:0000025!1.59e-10!194;UBERON:0000200!2.56e-08!6;UBERON:0004111!4.09e-08!241;UBERON:0000062!6.08e-08!511;UBERON:0001873!6.91e-08!2;UBERON:0010122!6.91e-08!2;UBERON:0000477!8.34e-08!286;UBERON:0001876!9.56e-08!2;UBERON:0001954!1.65e-07!2;UBERON:0003022!1.65e-07!2;UBERON:0002421!1.65e-07!2;UBERON:0002600!1.65e-07!2;UBERON:0001875!1.99e-07!2;UBERON:0006514!1.99e-07!2;UBERON:0000481!8.18e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0005383;1.37e-66;3!UBERON:0005382;1.37e-66;3!UBERON:0002420;3.50e-61;9!UBERON:0007245;3.50e-61;9!UBERON:0010009;3.50e-61;9!UBERON:0010011;3.50e-61;9!UBERON:0000454;3.50e-61;9!UBERON:0009663;8.41e-51;7!UBERON:0000369;3.39e-50;4!UBERON:0002435;3.39e-50;4!UBERON:0000204;3.39e-50;4!UBERON:0001873;6.99e-45;2!UBERON:0000125;1.15e-39;9!UBERON:0002308;1.15e-39;9!UBERON:0002791;6.95e-25;32!UBERON:0001874;1.33e-23;1!UBERON:0001869;1.88e-23;32!UBERON:0003528;4.14e-21;34!UBERON:0002020;4.14e-21;34!UBERON:0001893;4.28e-21;34!UBERON:0002780;2.22e-17;41!UBERON:0001890;2.22e-17;41!UBERON:0000955;1.39e-12;68!UBERON:0001875;1.65e-12;2!UBERON:0006514;1.65e-12;2!UBERON:0001876;2.74e-12;2!UBERON:0001017;4.03e-10;75!UBERON:0002114;1.26e-08;2!UBERON:0000073;2.04e-08;53!UBERON:0002616;2.04e-08;53!UBERON:0001016;3.03e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.23e-66,3;UBERON:0005382,1.23e-66,3;UBERON:0002420,5.09e-61,9;UBERON:0007245,5.09e-61,9;UBERON:0010009,5.09e-61,9;UBERON:0010011,5.09e-61,9;UBERON:0000454,5.09e-61,9;UBERON:0009663,8.98e-51,7;UBERON:0000369,3.12e-50,4;UBERON:0002435,3.12e-50,4;UBERON:0000204,3.12e-50,4;UBERON:0010082,3.12e-50,4;UBERON:0001873,7.83e-45,2;UBERON:0010122,7.83e-45,2;UBERON:0000125,1.21e-39,9;UBERON:0002308,1.21e-39,9;UBERON:0002791,5.04e-24,32;UBERON:0001869,5.04e-24,32;UBERON:0001874,1.07e-23,1;UBERON:0003528,1.16e-22,34;UBERON:0002020,1.16e-22,34;UBERON:0001893,1.16e-22,34;UBERON:0002780,6.62e-19,41;UBERON:0001890,6.62e-19,41;UBERON:0003080,6.62e-19,41;UBERON:0006240,6.62e-19,41;UBERON:0001017,8.70e-17,81;UBERON:0000955,2.47e-15,68;UBERON:0006238,2.47e-15,68;UBERON:0001016,3.95e-15,89;UBERON:0000073,1.01e-14,53;UBERON:0002616,1.01e-14,53;UBERON:0001049,5.98e-14,56;UBERON:0005068,5.98e-14,56;UBERON:0006241,5.98e-14,56;UBERON:0007135,5.98e-14,56;UBERON:0003056,7.93e-13,61;UBERON:0001875,1.85e-12,2;UBERON:0006514,1.85e-12,2;UBERON:0001876,3.62e-12,2;UBERON:0003075,1.41e-09,82;UBERON:0007284,1.41e-09,82;UBERON:0002346,3.90e-09,86;UBERON:0002114,1.12e-08,2;UBERON:0004121,7.05e-08,171;UBERON:0000924,7.05e-08,171;UBERON:0006601,7.05e-08,171;UBERON:0011216,1.33e-07,223;UBERON:0010371,1.48e-07,104;UBERON:0007023,5.98e-07,114 | |||
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|short_description=p6@LPPR4 | |short_description=p6@LPPR4 | ||
}} | }} |
Latest revision as of 02:01, 20 September 2015
Short description: | p6@LPPR4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LPPR4_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 99bp_to_uc001dse.2, uc010oue.1_5end |
EntrezGene: | LPPR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data