FFCP PHASE1:Hg19::chr5:141348598..141348626,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9604 | |EntrezGene=9604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10058 | |HGNC=10058 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBS8 | |UniProt=Q9UBS8 | ||
|association_with_transcript=0bp_to_ENST00000347642,ENST00000394520,uc003lma.2,uc003lmb.2,uc003lmc.2,uc011dbg.1,uc011dbh.1_5end | |association_with_transcript=0bp_to_ENST00000347642,ENST00000394520,uc003lma.2,uc003lmb.2,uc003lmc.2,uc011dbg.1,uc011dbh.1_5end | ||
|cluster_id=chr5:141348598..141348626,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_2_at_RNF14_5end | |description=CAGE_peak_2_at_RNF14_5end | ||
|id=chr5:141348598..141348626,+ | |id=chr5:141348598..141348626,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001950;1.13e-09;20!UBERON:0002619;1.47e-08;22!UBERON:0002780;3.43e-08;41!UBERON:0001890;3.43e-08;41!UBERON:0000956;3.74e-08;25!UBERON:0000203;3.74e-08;25!UBERON:0001869;5.56e-08;32!UBERON:0000073;6.18e-08;53!UBERON:0002616;6.18e-08;53!UBERON:0001893;1.82e-07;34!UBERON:0003528;2.39e-07;34!UBERON:0002020;2.39e-07;34!UBERON:0002791;6.53e-07;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-16!115;UBERON:0000073!4.93e-14!94;UBERON:0001016!4.93e-14!94;UBERON:0001049!8.61e-14!57;UBERON:0005068!8.61e-14!57;UBERON:0006241!8.61e-14!57;UBERON:0007135!8.61e-14!57;UBERON:0002616!7.06e-13!59;UBERON:0005743!9.16e-13!86;UBERON:0003080!3.87e-12!42;UBERON:0001017!4.66e-12!82;UBERON:0002780!6.12e-12!41;UBERON:0001890!6.12e-12!41;UBERON:0006240!6.12e-12!41;UBERON:0003075!6.21e-12!86;UBERON:0007284!6.21e-12!86;UBERON:0002346!1.34e-11!90;UBERON:0000955!3.93e-11!69;UBERON:0006238!3.93e-11!69;UBERON:0004121!6.20e-11!169;UBERON:0000924!8.01e-11!173;UBERON:0006601!8.01e-11!173;UBERON:0003056!1.60e-10!61;UBERON:0000475!2.86e-10!365;UBERON:0000153!3.51e-10!129;UBERON:0007811!3.51e-10!129;UBERON:0000033!5.78e-10!123;UBERON:0001869!1.56e-09!32;UBERON:0001950!1.58e-09!20;UBERON:0001893!2.47e-09!34;UBERON:0002020!3.17e-09!34;UBERON:0003528!3.17e-09!34;UBERON:0002619!6.54e-09!22;UBERON:0002791!8.44e-09!33;UBERON:0000956!1.01e-08!25;UBERON:0000203!1.01e-08!25;UBERON:0000481!1.50e-07!347;UBERON:0000119!7.62e-07!312;UBERON:0000483!8.41e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.13e-09;20!UBERON:0002619;1.47e-08;22!UBERON:0002780;3.43e-08;41!UBERON:0001890;3.43e-08;41!UBERON:0000956;3.74e-08;25!UBERON:0000203;3.74e-08;25!UBERON:0001869;5.56e-08;32!UBERON:0000073;6.18e-08;53!UBERON:0002616;6.18e-08;53!UBERON:0001893;1.82e-07;34!UBERON:0003528;2.39e-07;34!UBERON:0002020;2.39e-07;34!UBERON:0002791;6.53e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.93e-15,114;UBERON:0000073,7.48e-14,53;UBERON:0002616,7.48e-14,53;UBERON:0001049,2.00e-13,56;UBERON:0005068,2.00e-13,56;UBERON:0006241,2.00e-13,56;UBERON:0007135,2.00e-13,56;UBERON:0001016,3.03e-12,89;UBERON:0002780,5.87e-12,41;UBERON:0001890,5.87e-12,41;UBERON:0003080,5.87e-12,41;UBERON:0006240,5.87e-12,41;UBERON:0010371,6.73e-12,104;UBERON:0003075,2.62e-11,82;UBERON:0007284,2.62e-11,82;UBERON:0002346,6.31e-11,86;UBERON:0001017,7.56e-11,81;UBERON:0003056,3.28e-10,61;UBERON:0001950,4.37e-10,20;UBERON:0000955,9.98e-10,68;UBERON:0006238,9.98e-10,68;UBERON:0004121,1.18e-09,171;UBERON:0000924,1.18e-09,171;UBERON:0006601,1.18e-09,171;UBERON:0001869,1.23e-09,32;UBERON:0010314,1.89e-09,132;UBERON:0002619,3.25e-09,22;UBERON:0001893,3.29e-09,34;UBERON:0003528,4.25e-09,34;UBERON:0002020,4.25e-09,34;UBERON:0000956,5.02e-09,25;UBERON:0000203,5.02e-09,25;UBERON:0002791,2.23e-08,32 | |||
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| ||
|short_description=p2@RNF14 | |short_description=p2@RNF14 | ||
}} | }} |
Latest revision as of 05:36, 25 September 2015
Short description: | p2@RNF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF14_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000347642, ENST00000394520, uc003lma.2, uc003lmb.2, uc003lmc.2, uc011dbg.1, uc011dbh.1_5end |
EntrezGene: | RNF14 |
HGNC: | 10058 |
UniProt: | Q9UBS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.93e-15 | 114 |
regional part of nervous system | 7.48e-14 | 53 |
regional part of brain | 7.48e-14 | 53 |
neural tube | 2.00e-13 | 56 |
neural rod | 2.00e-13 | 56 |
future spinal cord | 2.00e-13 | 56 |
neural keel | 2.00e-13 | 56 |
nervous system | 3.03e-12 | 89 |
regional part of forebrain | 5.87e-12 | 41 |
forebrain | 5.87e-12 | 41 |
anterior neural tube | 5.87e-12 | 41 |
future forebrain | 5.87e-12 | 41 |
ecto-epithelium | 6.73e-12 | 104 |
neural plate | 2.62e-11 | 82 |
presumptive neural plate | 2.62e-11 | 82 |
neurectoderm | 6.31e-11 | 86 |
central nervous system | 7.56e-11 | 81 |
pre-chordal neural plate | 3.28e-10 | 61 |
neocortex | 4.37e-10 | 20 |
brain | 9.98e-10 | 68 |
future brain | 9.98e-10 | 68 |
ectoderm-derived structure | 1.18e-09 | 171 |
ectoderm | 1.18e-09 | 171 |
presumptive ectoderm | 1.18e-09 | 171 |
cerebral hemisphere | 1.23e-09 | 32 |
structure with developmental contribution from neural crest | 1.89e-09 | 132 |
regional part of cerebral cortex | 3.25e-09 | 22 |
telencephalon | 3.29e-09 | 34 |
brain grey matter | 4.25e-09 | 34 |
gray matter | 4.25e-09 | 34 |
cerebral cortex | 5.02e-09 | 25 |
pallium | 5.02e-09 | 25 |
regional part of telencephalon | 2.23e-08 | 32 |