FFCP PHASE1:Hg19::chr1:16010779..16010860,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:16010779..16010860,+
|short_description=p1@PLEKHM2
|description=CAGE_peak_1_at_PLEKHM2_5end
|association_with_transcript=0bp_to_ENST00000375799,NM_015164,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23207 | |EntrezGene=23207 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29131 | |HGNC=29131 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWE5 | |UniProt=Q8IWE5 | ||
|association_with_transcript=0bp_to_ENST00000375799,NM_015164,uc010obo.1_5end | |||
|cluster_id=chr1:16010779..16010860,+ | |||
|description=CAGE_peak_1_at_PLEKHM2_5end | |||
|id=chr1:16010779..16010860,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.38e-21!65;CL:0000766!2.35e-21!76;CL:0002194!1.08e-20!63;CL:0000576!1.08e-20!63;CL:0000040!1.08e-20!63;CL:0000559!1.08e-20!63;CL:0000557!2.12e-19!71;CL:0002057!2.93e-19!42;CL:0000860!1.91e-17!45;CL:0000839!5.18e-17!70;CL:0000763!2.35e-12!112;CL:0000049!2.35e-12!112;CL:0000738!1.09e-08!140;CL:0002087!1.99e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.81e-18;33!CL:0002057;2.81e-18;33!CL:0000473;5.77e-18;39!CL:0000234;5.77e-18;39!CL:0000576;1.97e-12;48!CL:0000766;1.45e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.28e-23,61;CL:0000766,1.24e-22,72;CL:0000473,1.91e-22,48;CL:0000234,1.91e-22,48;CL:0002194,3.47e-22,59;CL:0000576,3.47e-22,59;CL:0000040,3.47e-22,59;CL:0000559,3.47e-22,59;CL:0000557,1.20e-20,67;CL:0000860,2.93e-19,42;CL:0002057,2.93e-19,42;CL:0000839,3.98e-18,66;CL:0000763,7.05e-13,108;CL:0000049,7.05e-13,108;CL:0000738,5.38e-09,136;CL:0002087,9.83e-08,115;CL:0002031,9.01e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.93e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.32e-19!80;UBERON:0001474!3.69e-19!86;UBERON:0004765!2.13e-15!101;UBERON:0001434!2.13e-15!101;UBERON:0003081!2.98e-14!216;UBERON:0002390!5.25e-14!102;UBERON:0003061!5.25e-14!102;UBERON:0002193!2.22e-13!112;UBERON:0002204!1.31e-12!167;UBERON:0002405!2.24e-12!115;UBERON:0003075!9.87e-09!86;UBERON:0007284!9.87e-09!86;UBERON:0001893!2.02e-08!34;UBERON:0001869!2.16e-08!32;UBERON:0001049!2.44e-08!57;UBERON:0005068!2.44e-08!57;UBERON:0006241!2.44e-08!57;UBERON:0007135!2.44e-08!57;UBERON:0002020!3.10e-08!34;UBERON:0003528!3.10e-08!34;UBERON:0002619!3.85e-08!22;UBERON:0002791!5.87e-08!33;UBERON:0002346!9.22e-08!90;UBERON:0007023!1.08e-07!115;UBERON:0001950!1.39e-07!20;UBERON:0000923!4.51e-07!604;UBERON:0005291!4.51e-07!604;UBERON:0006598!4.51e-07!604;UBERON:0002532!4.51e-07!604;UBERON:0002616!5.40e-07!59;UBERON:0002050!6.62e-07!605;UBERON:0005423!6.62e-07!605;UBERON:0000956!6.73e-07!25;UBERON:0000203!6.73e-07!25;UBERON:0003080!7.39e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.23e-08;22!UBERON:0001950;1.21e-07;20!UBERON:0001869;1.22e-07;32!UBERON:0001893;1.88e-07;34!UBERON:0002791;3.15e-07;32!UBERON:0003528;3.29e-07;34!UBERON:0002020;3.29e-07;34!UBERON:0000956;5.13e-07;25!UBERON:0000203;5.13e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-20,76;UBERON:0001474,3.53e-20,82;UBERON:0002405,5.50e-18,93;UBERON:0004765,1.29e-16,90;UBERON:0001434,1.26e-15,100;UBERON:0002390,1.19e-14,98;UBERON:0003061,1.19e-14,98;UBERON:0002193,6.07e-14,108;UBERON:0003081,5.03e-13,203;UBERON:0002204,8.70e-13,167;UBERON:0000926,1.81e-08,315;UBERON:0004120,1.81e-08,315;UBERON:0006603,1.81e-08,315;UBERON:0001893,2.02e-08,34;UBERON:0001869,2.16e-08,32;UBERON:0003528,3.10e-08,34;UBERON:0002020,3.10e-08,34;UBERON:0000073,3.10e-08,53;UBERON:0002616,3.10e-08,53;UBERON:0001049,3.46e-08,56;UBERON:0005068,3.46e-08,56;UBERON:0006241,3.46e-08,56;UBERON:0007135,3.46e-08,56;UBERON:0002619,3.85e-08,22;UBERON:0002791,7.48e-08,32;UBERON:0001950,1.39e-07,20;UBERON:0003075,2.23e-07,82;UBERON:0007284,2.23e-07,82;UBERON:0007023,2.28e-07,114;UBERON:0005423,2.73e-07,581;UBERON:0010371,3.65e-07,104;UBERON:0000923,4.68e-07,560;UBERON:0010316,4.68e-07,560;UBERON:0005291,4.68e-07,560;UBERON:0006598,4.68e-07,560;UBERON:0010317,4.68e-07,560;UBERON:0002532,4.68e-07,560;UBERON:0000956,6.73e-07,25;UBERON:0000203,6.73e-07,25 | |||
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| ||
|short_description=p1@PLEKHM2 | |||
}} | }} |
Latest revision as of 00:54, 18 September 2015
Short description: | p1@PLEKHM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLEKHM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375799, NM_015164, uc010obo.1_5end |
EntrezGene: | PLEKHM2 |
HGNC: | 29131 |
UniProt: | Q8IWE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.28e-23 | 61 |
myeloid leukocyte | 1.24e-22 | 72 |
defensive cell | 1.91e-22 | 48 |
phagocyte | 1.91e-22 | 48 |
monopoietic cell | 3.47e-22 | 59 |
monocyte | 3.47e-22 | 59 |
monoblast | 3.47e-22 | 59 |
promonocyte | 3.47e-22 | 59 |
granulocyte monocyte progenitor cell | 1.20e-20 | 67 |
classical monocyte | 2.93e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-19 | 42 |
myeloid lineage restricted progenitor cell | 3.98e-18 | 66 |
myeloid cell | 7.05e-13 | 108 |
common myeloid progenitor | 7.05e-13 | 108 |
leukocyte | 5.38e-09 | 136 |
nongranular leukocyte | 9.83e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 9.01e-07 | 120 |