FFCP PHASE1:Hg19::chr2:7057536..7057613,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9781 | |EntrezGene=9781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20457 | |HGNC=20457 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKY7 | |UniProt=C9JKY7 | ||
|association_with_transcript=0bp_to_ENST00000427092_5end | |association_with_transcript=0bp_to_ENST00000427092_5end | ||
|cluster_id=chr2:7057536..7057613,+ | |||
|description=CAGE_peak_1_at_RNF144A_5end | |description=CAGE_peak_1_at_RNF144A_5end | ||
|id=chr2:7057536..7057613,+ | |id=chr2:7057536..7057613,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.49e-07!18;CL:0000789!7.49e-07!18;CL:0002420!7.49e-07!18;CL:0002419!7.49e-07!18;CL:0000790!7.49e-07!18 | |ontology_enrichment_celltype=CL:0000791!7.49e-07!18;CL:0000789!7.49e-07!18;CL:0002420!7.49e-07!18;CL:0002419!7.49e-07!18;CL:0000790!7.49e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.24e-07;18!CL:0000789;7.24e-07;18!CL:0002419;7.24e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.96e-07,18;CL:0000789,6.96e-07,18;CL:0002420,6.96e-07,18;CL:0002419,6.96e-07,18;CL:0000790,6.96e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;7.24e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.77e-31!115;UBERON:0000073!1.11e-23!94;UBERON:0001016!1.11e-23!94;UBERON:0001017!2.17e-23!82;UBERON:0005743!4.34e-23!86;UBERON:0001049!3.45e-22!57;UBERON:0005068!3.45e-22!57;UBERON:0006241!3.45e-22!57;UBERON:0007135!3.45e-22!57;UBERON:0000955!6.68e-21!69;UBERON:0006238!6.68e-21!69;UBERON:0002616!1.33e-20!59;UBERON:0003075!9.04e-20!86;UBERON:0007284!9.04e-20!86;UBERON:0002346!2.44e-19!90;UBERON:0003080!1.94e-17!42;UBERON:0002780!6.89e-17!41;UBERON:0001890!6.89e-17!41;UBERON:0006240!6.89e-17!41;UBERON:0003056!2.61e-15!61;UBERON:0001893!1.93e-14!34;UBERON:0002020!3.83e-14!34;UBERON:0003528!3.83e-14!34;UBERON:0002791!4.64e-14!33;UBERON:0001869!1.12e-13!32;UBERON:0000153!9.13e-13!129;UBERON:0007811!9.13e-13!129;UBERON:0004121!5.86e-12!169;UBERON:0000924!6.12e-12!173;UBERON:0006601!6.12e-12!173;UBERON:0000033!1.66e-11!123;UBERON:0002619!1.38e-10!22;UBERON:0000956!2.72e-10!25;UBERON:0000203!2.72e-10!25;UBERON:0001950!2.94e-10!20 | |ontology_enrichment_uberon=UBERON:0007023!2.77e-31!115;UBERON:0000073!1.11e-23!94;UBERON:0001016!1.11e-23!94;UBERON:0001017!2.17e-23!82;UBERON:0005743!4.34e-23!86;UBERON:0001049!3.45e-22!57;UBERON:0005068!3.45e-22!57;UBERON:0006241!3.45e-22!57;UBERON:0007135!3.45e-22!57;UBERON:0000955!6.68e-21!69;UBERON:0006238!6.68e-21!69;UBERON:0002616!1.33e-20!59;UBERON:0003075!9.04e-20!86;UBERON:0007284!9.04e-20!86;UBERON:0002346!2.44e-19!90;UBERON:0003080!1.94e-17!42;UBERON:0002780!6.89e-17!41;UBERON:0001890!6.89e-17!41;UBERON:0006240!6.89e-17!41;UBERON:0003056!2.61e-15!61;UBERON:0001893!1.93e-14!34;UBERON:0002020!3.83e-14!34;UBERON:0003528!3.83e-14!34;UBERON:0002791!4.64e-14!33;UBERON:0001869!1.12e-13!32;UBERON:0000153!9.13e-13!129;UBERON:0007811!9.13e-13!129;UBERON:0004121!5.86e-12!169;UBERON:0000924!6.12e-12!173;UBERON:0006601!6.12e-12!173;UBERON:0000033!1.66e-11!123;UBERON:0002619!1.38e-10!22;UBERON:0000956!2.72e-10!25;UBERON:0000203!2.72e-10!25;UBERON:0001950!2.94e-10!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.36e-12;34!UBERON:0001869;1.61e-12;32!UBERON:0002791;1.66e-12;32!UBERON:0002780;1.73e-12;41!UBERON:0001890;1.73e-12;41!UBERON:0003528;2.41e-12;34!UBERON:0002020;2.41e-12;34!UBERON:0000073;4.70e-12;53!UBERON:0002616;4.70e-12;53!UBERON:0002619;1.23e-10;22!UBERON:0000956;2.55e-10;25!UBERON:0000203;2.55e-10;25!UBERON:0001950;2.66e-10;20!UBERON:0001017;4.45e-10;75!UBERON:0001016;1.14e-09;83!UBERON:0000955;1.17e-09;68!UBERON:0007023;1.98e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.68e-31,114;UBERON:0001016,2.46e-23,89;UBERON:0001017,8.77e-23,81;UBERON:0001049,9.48e-22,56;UBERON:0005068,9.48e-22,56;UBERON:0006241,9.48e-22,56;UBERON:0007135,9.48e-22,56;UBERON:0000073,1.33e-20,53;UBERON:0002616,1.33e-20,53;UBERON:0000955,2.79e-20,68;UBERON:0006238,2.79e-20,68;UBERON:0003075,3.22e-20,82;UBERON:0007284,3.22e-20,82;UBERON:0002346,9.67e-20,86;UBERON:0002780,5.57e-17,41;UBERON:0001890,5.57e-17,41;UBERON:0003080,5.57e-17,41;UBERON:0006240,5.57e-17,41;UBERON:0003056,1.70e-15,61;UBERON:0001893,1.62e-14,34;UBERON:0003528,3.22e-14,34;UBERON:0002020,3.22e-14,34;UBERON:0001869,9.46e-14,32;UBERON:0002791,1.09e-13,32;UBERON:0010371,1.07e-12,104;UBERON:0010314,7.46e-12,132;UBERON:0004121,2.61e-11,171;UBERON:0000924,2.61e-11,171;UBERON:0006601,2.61e-11,171;UBERON:0002619,1.22e-10,22;UBERON:0000956,2.41e-10,25;UBERON:0000203,2.41e-10,25;UBERON:0001950,2.60e-10,20;UBERON:0011216,9.37e-08,223 | |||
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| ||
|short_description=p1@RNF144A | |short_description=p1@RNF144A | ||
}} | }} |
Latest revision as of 06:48, 18 September 2015
Short description: | p1@RNF144A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF144A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427092_5end |
EntrezGene: | RNF144A |
HGNC: | 20457 |
UniProt: | C9JKY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.96e-07 | 18 |
alpha-beta T cell | 6.96e-07 | 18 |
immature T cell | 6.96e-07 | 18 |
mature T cell | 6.96e-07 | 18 |
immature alpha-beta T cell | 6.96e-07 | 18 |