FFCP PHASE1:Hg19::chr1:26869597..26869637,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:26869597..26869637,+
|short_description=p3@RPS6KA1
|description=CAGE_peak_3_at_RPS6KA1_5end
|association_with_transcript=0bp_to_ENST00000366866,ENST0000053...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6195 | |EntrezGene=6195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10430 | |HGNC=10430 | ||
|TSSclassifier=strong | |||
|UniProt=A6NND1,E9PRI4 | |UniProt=A6NND1,E9PRI4 | ||
|association_with_transcript=0bp_to_ENST00000366866,ENST00000530003_5end | |||
|cluster_id=chr1:26869597..26869637,+ | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_3_at_RPS6KA1_5end | |||
|id=chr1:26869597..26869637,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.73e-54!172;CL:0000566!4.73e-54!172;CL:0000763!8.03e-54!112;CL:0000049!8.03e-54!112;CL:0002032!8.70e-50!165;CL:0000837!8.70e-50!165;CL:0000988!2.05e-49!182;CL:0000766!1.67e-45!76;CL:0000738!4.43e-43!140;CL:0000557!1.13e-39!71;CL:0000839!5.03e-39!70;CL:0002009!2.52e-38!65;CL:0002194!9.93e-38!63;CL:0000576!9.93e-38!63;CL:0000040!9.93e-38!63;CL:0000559!9.93e-38!63;CL:0002087!9.22e-34!119;CL:0002031!1.08e-33!124;CL:0002057!3.27e-30!42;CL:0000860!4.62e-27!45;CL:0002393!4.79e-09!9;CL:0002397!4.79e-09!9;CL:0000094!1.15e-08!8;CL:0000134!1.58e-07!358;CL:0000945!6.50e-07!24;CL:0000826!6.50e-07!24;CL:0002320!7.89e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;7.08e-25;48!CL:0000473;5.16e-22;39!CL:0000234;5.16e-22;39!CL:0000860;2.81e-20;33!CL:0002057;2.81e-20;33!CL:0000766;3.67e-20;69!CL:0000763;2.41e-15;100!CL:0000094;1.86e-11;8!CL:0000738;9.53e-10;136!CL:0000235;3.63e-08;6!CL:0002393;3.98e-08;6!CL:0002397;3.98e-08;6!CL:0000081;9.14e-08;11!CL:0002087;9.61e-08;104!CL:0000988;7.02e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.34e-55,72;CL:0000763,8.74e-53,108;CL:0000049,8.74e-53,108;CL:0002194,7.17e-49,59;CL:0000576,7.17e-49,59;CL:0000040,7.17e-49,59;CL:0000559,7.17e-49,59;CL:0002009,1.10e-46,61;CL:0000839,3.96e-45,66;CL:0000557,1.34e-44,67;CL:0000037,6.12e-43,168;CL:0000473,2.21e-39,48;CL:0000234,2.21e-39,48;CL:0000988,2.78e-39,177;CL:0002032,5.40e-38,161;CL:0000837,5.40e-38,161;CL:0000738,5.92e-36,136;CL:0000860,1.36e-32,42;CL:0002057,1.36e-32,42;CL:0002087,2.06e-30,115;CL:0002031,1.08e-25,120;CL:0002393,8.40e-12,9;CL:0002397,8.40e-12,9;CL:0000094,2.78e-11,8;CL:0000235,2.63e-08,6;CL:0000081,1.20e-07,11;CL:0000134,2.40e-07,354;CL:0002320,8.34e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-22;42!CL:0000049;1.92e-15;108 | |||
|ontology_enrichment_disease=DOID:8692!2.83e-09!31;DOID:1240!2.42e-07!39;DOID:2531!5.02e-07!51;DOID:0060083!5.02e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.07e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-46!102;UBERON:0003061!1.90e-46!102;UBERON:0002193!6.08e-42!112;UBERON:0007023!7.21e-39!115;UBERON:0002371!5.91e-35!80;UBERON:0001474!9.40e-31!86;UBERON:0002405!6.82e-25!115;UBERON:0004765!2.78e-24!101;UBERON:0001434!2.78e-24!101;UBERON:0001049!7.90e-19!57;UBERON:0005068!7.90e-19!57;UBERON:0006241!7.90e-19!57;UBERON:0007135!7.90e-19!57;UBERON:0003080!1.38e-14!42;UBERON:0002616!1.92e-14!59;UBERON:0002780!3.13e-14!41;UBERON:0001890!3.13e-14!41;UBERON:0006240!3.13e-14!41;UBERON:0001893!9.77e-12!34;UBERON:0001017!1.02e-11!82;UBERON:0000955!1.16e-11!69;UBERON:0006238!1.16e-11!69;UBERON:0002020!1.16e-11!34;UBERON:0003528!1.16e-11!34;UBERON:0002791!2.84e-11!33;UBERON:0005743!3.49e-11!86;UBERON:0003081!7.74e-11!216;UBERON:0000178!1.91e-10!15;UBERON:0000179!1.91e-10!15;UBERON:0000463!1.91e-10!15;UBERON:0001869!3.03e-10!32;UBERON:0003075!3.78e-10!86;UBERON:0007284!3.78e-10!86;UBERON:0002346!4.30e-09!90;UBERON:0002619!4.36e-09!22;UBERON:0000073!8.38e-09!94;UBERON:0001016!8.38e-09!94;UBERON:0000479!1.34e-08!787;UBERON:0001950!5.29e-08!20;UBERON:0003056!1.48e-07!61;UBERON:0000956!2.22e-07!25;UBERON:0000203!2.22e-07!25;UBERON:0002204!2.75e-07!167;UBERON:0002298!4.07e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.41e-13;15!UBERON:0000179;8.41e-13;15!UBERON:0000463;8.41e-13;15!UBERON:0002780;1.62e-10;41!UBERON:0001890;1.62e-10;41!UBERON:0000073;2.81e-10;53!UBERON:0002616;2.81e-10;53!UBERON:0001893;4.19e-10;34!UBERON:0002390;1.09e-09;32!UBERON:0002791;2.18e-09;32!UBERON:0001869;4.13e-09;32!UBERON:0003528;4.57e-09;34!UBERON:0002020;4.57e-09;34!UBERON:0002619;4.66e-08;22!UBERON:0001950;1.03e-07;20!UBERON:0007023;2.60e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.11e-52,98;UBERON:0003061,2.11e-52,98;UBERON:0002193,2.71e-48,108;UBERON:0002371,6.04e-39,76;UBERON:0002405,1.51e-36,93;UBERON:0001474,9.66e-35,82;UBERON:0004765,4.97e-30,90;UBERON:0001434,2.61e-26,100;UBERON:0007023,3.26e-25,114;UBERON:0001049,4.17e-17,56;UBERON:0005068,4.17e-17,56;UBERON:0006241,4.17e-17,56;UBERON:0007135,4.17e-17,56;UBERON:0000073,6.25e-16,53;UBERON:0002616,6.25e-16,53;UBERON:0003081,1.21e-15,203;UBERON:0002780,5.20e-14,41;UBERON:0001890,5.20e-14,41;UBERON:0003080,5.20e-14,41;UBERON:0006240,5.20e-14,41;UBERON:0000178,8.95e-13,15;UBERON:0000179,8.95e-13,15;UBERON:0000463,8.95e-13,15;UBERON:0001893,1.43e-12,34;UBERON:0003528,1.96e-11,34;UBERON:0002020,1.96e-11,34;UBERON:0002791,4.76e-11,32;UBERON:0000955,5.52e-11,68;UBERON:0006238,5.52e-11,68;UBERON:0001017,9.84e-11,81;UBERON:0001869,1.09e-10,32;UBERON:0002204,1.01e-09,167;UBERON:0003075,2.68e-09,82;UBERON:0007284,2.68e-09,82;UBERON:0001016,1.04e-08,89;UBERON:0002346,1.92e-08,86;UBERON:0002619,2.52e-08,22;UBERON:0001950,5.48e-08,20;UBERON:0003056,8.55e-08,61;UBERON:0000956,6.18e-07,25;UBERON:0000203,6.18e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.57470412614962,0.944529375764151,2.36018566109342,1.15148819429164,4.02521920621798,0,0,0,0.92960640696362,0,4.11040615068786,2.76997704265939,2.20598892217156,1.95309783644267,6.49354875295781,1.94336199611388,6.69696475848885,4.65274364094607,2.26725566213286,2.42584061187816,1.16214518452842,0.822335776043652,3.09706370895104,3.16461631554365,2.0492856522328,3.31075121844019,0.689491361473237,2.5819387343353,1.35426486594342,2.82363509313907,2.18324920046277,1.57306439111559,1.83650335422542,1.60464513538047,2.55734850319616,4.61791820261403,6.98122801675712,1.27867425159808,0.870627715885752,0.56738522469114,1.24564449799115,3.26623264833766,4.17186334736161,2.82345498116652,0.605399502633369,1.47311054395026,1.26584954976354,12.4640618924046,10.4176106982871,10.9022495664355,18.5342241391717,15.9187506411997,11.8936934155839,5.98526761856622,4.97291692997725,6.02791707423292,3.51992488922645,1.09227722252426,5.33705552318133,2.13365111283254,2.80277190925209,1.72425731986345,3.30522436392431,0,1.1384259382189,1.17447437874188,0,0,0,6.847986204152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,9.7364218096405,6.61693001737215,9.04114131528283,4.76981248610684,5.71994910780128,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1314542666882,23.2668158488995,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93947209739836,1.40402559083543,2.82399208348584,0,0,0,0,0,0,0,1.14462964217194,0.414656231081544,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,12.5564272858032,8.43335757932127,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,20.2231896465739,23.932916736322,33.1532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54889657470352,3.66714141391649,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.522870902049801,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.941438007767792,0,0,0,0,13.7010854492686,9.94028369285088,15.9501212408766,12.6262840992628,17.2772154696202,16.2118327798179,11.8806916192385,17.4487538784739,0,0,0,1.30062222588003,0,0,0,0.798317485731266,13.596881279398,5.50351315082095,0.649243880549111,10.9510899464249,1.14117339516596,1.56679895773023,5.01268954180134,1.52362600021443,4.01470187759249,8.67738740921505,0.851692475380653,2.40453741329035,3.07240764308458,3.57881772627865,3.17013369252626,2.54004524022652,0,0,1.08182271390393,0,0,0,1.46508179271894,0,0,0,0,0.296964680832639,0,0,6.6114625712941,0,0,0,0.398495976502139,1.10513566212459,0,0,0.738508832766417,0,0,0,6.65044081294933,0.394573622547734,7.18449277040819,0,0.969332746095218,2.41197055220813,0,0,0,0.724999575434793,0,0,0,0,0,0,0,3.49729672013683,0,0.884634079449797,1.77328571372128,1.31631238292384,0,0,1.23120413606075,0,0,0,0,0.31900115973192,0,0,0,0.784901281975124,0.831058409500782,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,1.14994833854341,1.83309043480088,0,0.247127877893006,0,6.60531103210635,0,1.87411556580271,0.364909578431332,0,0,0.394584402849391,2.41981432097328,0.30607276163049,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,1.89932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,5.20240439789574,6.38732940334862,0,0.525774708558629,0,0.458320848023367,0,0,0,0.669514372325618,0.671834724867263,0,0,0,0,0,0,0,0.795229689809303,4.494712401682,0,0,0,0.2249738915515,0.77380195455795,1.39723980313457,0,0.86686278029118,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,0,0.904980694530854,5.95046707842105,0,0,1.81538601365081,0.78602152549833,3.72815149812476,2.97699613087171,0.592834895693833,0.365377795142688,0,0,0,0,0,0,0,0.488105059607853,2.6290095448365,2.29363678276028,6.65574309221114,4.47094101177961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0.132864840313363,0.490696182767533,0,0,0,0.19998739585493,2.3472180532711,0.344429959321631,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99110597799025,0,3.19267718114303,1.43581454968528,0,1.31398779682014,1.29180516505481,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,1.2156765231311,1.56215619722769,2.89361515101658,1.45856363445986,0.546974809018219,1.09651553371436,0,0,0,0,0.672567444437648,1.21393120847326,0.682986574053893,1.1531308121143,0.576169937778896,0,3.05863798395743,1.71009211263408,0,0,1.25588948560822,2.35673384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| ||
|short_description=p3@RPS6KA1 | |||
}} | }} |
Latest revision as of 06:03, 17 September 2015
Short description: | p3@RPS6KA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS6KA1_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_ENST00000366866, ENST00000530003_5end |
EntrezGene: | RPS6KA1 |
HGNC: | 10430 |
UniProt: | A6NND1E9PRI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.34e-55 | 72 |
myeloid cell | 8.74e-53 | 108 |
common myeloid progenitor | 8.74e-53 | 108 |
monopoietic cell | 7.17e-49 | 59 |
monocyte | 7.17e-49 | 59 |
monoblast | 7.17e-49 | 59 |
promonocyte | 7.17e-49 | 59 |
macrophage dendritic cell progenitor | 1.10e-46 | 61 |
myeloid lineage restricted progenitor cell | 3.96e-45 | 66 |
granulocyte monocyte progenitor cell | 1.34e-44 | 67 |
hematopoietic stem cell | 6.12e-43 | 168 |
defensive cell | 2.21e-39 | 48 |
phagocyte | 2.21e-39 | 48 |
hematopoietic cell | 2.78e-39 | 177 |
hematopoietic oligopotent progenitor cell | 5.40e-38 | 161 |
hematopoietic multipotent progenitor cell | 5.40e-38 | 161 |
leukocyte | 5.92e-36 | 136 |
classical monocyte | 1.36e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.36e-32 | 42 |
nongranular leukocyte | 2.06e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.08e-25 | 120 |
intermediate monocyte | 8.40e-12 | 9 |
CD14-positive, CD16-positive monocyte | 8.40e-12 | 9 |
granulocyte | 2.78e-11 | 8 |
macrophage | 2.63e-08 | 6 |
blood cell | 1.20e-07 | 11 |
mesenchymal cell | 2.40e-07 | 354 |
connective tissue cell | 8.34e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.07e-07 | 31 |