FFCP PHASE1:Hg19::chr1:31345872..31345883,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:31345872..31345883,-
|short_description=p6@SDC3
|description=CAGE_peak_6_at_SDC3_5end
|association_with_transcript=-436bp_to_AL049426_5end
|EntrezGene=967...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9672 | |EntrezGene=9672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10660 | |HGNC=10660 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-436bp_to_AL049426_5end | |||
|cluster_id=chr1:31345872..31345883,- | |||
|description=CAGE_peak_6_at_SDC3_5end | |||
|id=chr1:31345872..31345883,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002536;1.25e-07;2!CL:0002561;3.45e-07;2!CL:0002262;9.17e-07;2!CL:1000398;9.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,1.12e-07,2;CL:0002561,3.23e-07,2;CL:0002262,5.59e-07,2;CL:1000398,5.59e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;9.17e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002791;1.55e-09;32!UBERON:0003528;2.99e-09;34!UBERON:0002020;2.99e-09;34!UBERON:0002619;6.48e-09;22!UBERON:0000073;2.43e-08;53!UBERON:0002616;2.43e-08;53!UBERON:0001893;3.21e-08;34!UBERON:0001950;7.06e-08;20!UBERON:0001869;7.34e-08;32!UBERON:0000956;1.08e-07;25!UBERON:0000203;1.08e-07;25!UBERON:0005933;3.45e-07;2!UBERON:0005942;3.45e-07;2!UBERON:0005932;3.45e-07;2!UBERON:0001281;9.17e-07;2!UBERON:0003497;9.17e-07;2!UBERON:0003909;9.17e-07;2!UBERON:0003835;9.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.63e-12,56;UBERON:0005068,1.63e-12,56;UBERON:0006241,1.63e-12,56;UBERON:0007135,1.63e-12,56;UBERON:0000073,7.50e-12,53;UBERON:0002616,7.50e-12,53;UBERON:0003528,8.77e-12,34;UBERON:0002020,8.77e-12,34;UBERON:0010371,3.07e-11,104;UBERON:0002791,1.14e-10,32;UBERON:0001893,6.63e-10,34;UBERON:0003075,2.42e-09,82;UBERON:0007284,2.42e-09,82;UBERON:0002619,3.32e-09,22;UBERON:0001869,6.00e-09,32;UBERON:0002346,1.07e-08,86;UBERON:0000955,3.20e-08,68;UBERON:0006238,3.20e-08,68;UBERON:0001017,3.40e-08,81;UBERON:0001950,4.35e-08,20;UBERON:0000956,6.06e-08,25;UBERON:0000203,6.06e-08,25;UBERON:0002780,8.10e-08,41;UBERON:0001890,8.10e-08,41;UBERON:0003080,8.10e-08,41;UBERON:0006240,8.10e-08,41;UBERON:0004121,9.29e-08,171;UBERON:0000924,9.29e-08,171;UBERON:0006601,9.29e-08,171;UBERON:0005933,3.23e-07,2;UBERON:0005942,3.23e-07,2;UBERON:0005932,3.23e-07,2;UBERON:0001281,5.59e-07,2;UBERON:0003497,5.59e-07,2;UBERON:0003909,5.59e-07,2;UBERON:0003835,5.59e-07,2;UBERON:0001016,5.66e-07,89 | |||
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| ||
|short_description=p6@SDC3 | |||
}} | }} |
Latest revision as of 12:42, 17 September 2015
Short description: | p6@SDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SDC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -436bp_to_AL049426_5end |
EntrezGene: | SDC3 |
HGNC: | 10660 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 1.12e-07 | 2 |
outer root sheath cell | 3.23e-07 | 2 |
endothelial cell of sinusoid | 5.59e-07 | 2 |
endothelial cell of hepatic sinusoid | 5.59e-07 | 2 |