FFCP PHASE1:Hg19::chr12:49932805..49932858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23416 | |EntrezGene=23416 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6252 | |HGNC=6252 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULD8 | |UniProt=Q9ULD8 | ||
|association_with_transcript=-81bp_to_ENST00000257981,NM_012284,uc001ruh.1,uc010smj.1_5end | |association_with_transcript=-81bp_to_ENST00000257981,NM_012284,uc001ruh.1,uc010smj.1_5end | ||
|cluster_id=chr12:49932805..49932858,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_KCNH3_5end | |description=CAGE_peak_1_at_KCNH3_5end | ||
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|ontology_enrichment_celltype=CL:0002057!4.27e-18!42;CL:0000860!3.57e-16!45;CL:0000766!1.90e-08!76;CL:0002194!3.94e-08!63;CL:0000576!3.94e-08!63;CL:0000040!3.94e-08!63;CL:0000559!3.94e-08!63;CL:0002009!6.09e-08!65;CL:0000738!7.23e-08!140;CL:0002087!1.57e-07!119;CL:0000557!2.81e-07!71 | |ontology_enrichment_celltype=CL:0002057!4.27e-18!42;CL:0000860!3.57e-16!45;CL:0000766!1.90e-08!76;CL:0002194!3.94e-08!63;CL:0000576!3.94e-08!63;CL:0000040!3.94e-08!63;CL:0000559!3.94e-08!63;CL:0002009!6.09e-08!65;CL:0000738!7.23e-08!140;CL:0002087!1.57e-07!119;CL:0000557!2.81e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.54e-13;33!CL:0002057;7.54e-13;33!CL:0000576;7.36e-11;48!CL:0000473;4.80e-08;39!CL:0000234;4.80e-08;39!CL:0000791;6.71e-07;18!CL:0000789;6.71e-07;18!CL:0002419;6.71e-07;18 | |ontology_enrichment_celltype_v019=CL:0000860;7.54e-13;33!CL:0002057;7.54e-13;33!CL:0000576;7.36e-11;48!CL:0000473;4.80e-08;39!CL:0000234;4.80e-08;39!CL:0000791;6.71e-07;18!CL:0000789;6.71e-07;18!CL:0002419;6.71e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.48e-21,42;CL:0002057,5.48e-21,42;CL:0000473,7.45e-17,48;CL:0000234,7.45e-17,48;CL:0002194,3.03e-11,59;CL:0000576,3.03e-11,59;CL:0000040,3.03e-11,59;CL:0000559,3.03e-11,59;CL:0000766,3.07e-11,72;CL:0002009,1.52e-10,61;CL:0000557,2.45e-09,67;CL:0002087,2.98e-09,115;CL:0000839,5.32e-09,66;CL:0000738,8.58e-09,136;CL:0002393,7.90e-08,9;CL:0002397,7.90e-08,9;CL:0000791,6.59e-07,18;CL:0000789,6.59e-07,18;CL:0002420,6.59e-07,18;CL:0002419,6.59e-07,18;CL:0000790,6.59e-07,18;CL:0002031,8.41e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-14;42!CL:0000790;6.71e-07;18 | |ontology_enrichment_development_v019=CL:0002057;1.62e-14;42!CL:0000790;6.71e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.33e-23!41;UBERON:0001890!4.33e-23!41;UBERON:0006240!4.33e-23!41;UBERON:0001017!1.57e-22!82;UBERON:0000955!3.14e-22!69;UBERON:0006238!3.14e-22!69;UBERON:0003080!4.87e-22!42;UBERON:0005743!1.86e-21!86;UBERON:0001049!3.60e-21!57;UBERON:0005068!3.60e-21!57;UBERON:0006241!3.60e-21!57;UBERON:0007135!3.60e-21!57;UBERON:0000073!1.42e-20!94;UBERON:0001016!1.42e-20!94;UBERON:0001893!4.33e-20!34;UBERON:0001869!1.22e-19!32;UBERON:0007023!1.74e-19!115;UBERON:0002791!2.56e-19!33;UBERON:0002020!3.53e-19!34;UBERON:0003528!3.53e-19!34;UBERON:0002616!1.09e-18!59;UBERON:0002619!1.73e-16!22;UBERON:0001950!5.46e-15!20;UBERON:0000956!1.06e-14!25;UBERON:0000203!1.06e-14!25;UBERON:0002346!6.76e-14!90;UBERON:0003075!2.02e-13!86;UBERON:0007284!2.02e-13!86;UBERON:0003056!2.82e-13!61;UBERON:0000153!2.13e-11!129;UBERON:0007811!2.13e-11!129;UBERON:0000033!8.22e-11!123;UBERON:0000924!5.33e-09!173;UBERON:0006601!5.33e-09!173;UBERON:0004121!1.45e-08!169;UBERON:0002390!8.88e-08!102;UBERON:0003061!8.88e-08!102;UBERON:0002420!3.42e-07!9;UBERON:0007245!3.42e-07!9;UBERON:0010009!3.42e-07!9;UBERON:0010011!3.42e-07!9;UBERON:0000454!3.42e-07!9;UBERON:0001474!8.40e-07!86 | |ontology_enrichment_uberon=UBERON:0002780!4.33e-23!41;UBERON:0001890!4.33e-23!41;UBERON:0006240!4.33e-23!41;UBERON:0001017!1.57e-22!82;UBERON:0000955!3.14e-22!69;UBERON:0006238!3.14e-22!69;UBERON:0003080!4.87e-22!42;UBERON:0005743!1.86e-21!86;UBERON:0001049!3.60e-21!57;UBERON:0005068!3.60e-21!57;UBERON:0006241!3.60e-21!57;UBERON:0007135!3.60e-21!57;UBERON:0000073!1.42e-20!94;UBERON:0001016!1.42e-20!94;UBERON:0001893!4.33e-20!34;UBERON:0001869!1.22e-19!32;UBERON:0007023!1.74e-19!115;UBERON:0002791!2.56e-19!33;UBERON:0002020!3.53e-19!34;UBERON:0003528!3.53e-19!34;UBERON:0002616!1.09e-18!59;UBERON:0002619!1.73e-16!22;UBERON:0001950!5.46e-15!20;UBERON:0000956!1.06e-14!25;UBERON:0000203!1.06e-14!25;UBERON:0002346!6.76e-14!90;UBERON:0003075!2.02e-13!86;UBERON:0007284!2.02e-13!86;UBERON:0003056!2.82e-13!61;UBERON:0000153!2.13e-11!129;UBERON:0007811!2.13e-11!129;UBERON:0000033!8.22e-11!123;UBERON:0000924!5.33e-09!173;UBERON:0006601!5.33e-09!173;UBERON:0004121!1.45e-08!169;UBERON:0002390!8.88e-08!102;UBERON:0003061!8.88e-08!102;UBERON:0002420!3.42e-07!9;UBERON:0007245!3.42e-07!9;UBERON:0010009!3.42e-07!9;UBERON:0010011!3.42e-07!9;UBERON:0000454!3.42e-07!9;UBERON:0001474!8.40e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.82e-25;32!UBERON:0002619;2.84e-24;22!UBERON:0001893;6.95e-24;34!UBERON:0002791;6.85e-23;32!UBERON:0001950;4.97e-22;20!UBERON:0003528;8.78e-22;34!UBERON:0002020;8.78e-22;34!UBERON:0002780;9.25e-22;41!UBERON:0001890;9.25e-22;41!UBERON:0000956;2.17e-20;25!UBERON:0000203;2.17e-20;25!UBERON:0000073;1.16e-14;53!UBERON:0002616;1.16e-14;53!UBERON:0000955;2.77e-12;68!UBERON:0001017;3.37e-11;75!UBERON:0001016;4.29e-10;83!UBERON:0002420;1.02e-08;9!UBERON:0007245;1.02e-08;9!UBERON:0010009;1.02e-08;9!UBERON:0010011;1.02e-08;9!UBERON:0000454;1.02e-08;9!UBERON:0000200;1.92e-08;6!UBERON:0000349;2.80e-07;5!UBERON:0001872;4.29e-07;5!UBERON:0001871;6.97e-07;6!UBERON:0002021;8.18e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001869;9.82e-25;32!UBERON:0002619;2.84e-24;22!UBERON:0001893;6.95e-24;34!UBERON:0002791;6.85e-23;32!UBERON:0001950;4.97e-22;20!UBERON:0003528;8.78e-22;34!UBERON:0002020;8.78e-22;34!UBERON:0002780;9.25e-22;41!UBERON:0001890;9.25e-22;41!UBERON:0000956;2.17e-20;25!UBERON:0000203;2.17e-20;25!UBERON:0000073;1.16e-14;53!UBERON:0002616;1.16e-14;53!UBERON:0000955;2.77e-12;68!UBERON:0001017;3.37e-11;75!UBERON:0001016;4.29e-10;83!UBERON:0002420;1.02e-08;9!UBERON:0007245;1.02e-08;9!UBERON:0010009;1.02e-08;9!UBERON:0010011;1.02e-08;9!UBERON:0000454;1.02e-08;9!UBERON:0000200;1.92e-08;6!UBERON:0000349;2.80e-07;5!UBERON:0001872;4.29e-07;5!UBERON:0001871;6.97e-07;6!UBERON:0002021;8.18e-07;5 | ||
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| ||
|short_description=p1@KCNH3 | |short_description=p1@KCNH3 | ||
}} | }} |
Latest revision as of 16:33, 18 September 2015
Short description: | p1@KCNH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNH3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -81bp_to_ENST00000257981, NM_012284, uc001ruh.1, uc010smj.1_5end |
EntrezGene: | KCNH3 |
HGNC: | 6252 |
UniProt: | Q9ULD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.48e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.48e-21 | 42 |
defensive cell | 7.45e-17 | 48 |
phagocyte | 7.45e-17 | 48 |
monopoietic cell | 3.03e-11 | 59 |
monocyte | 3.03e-11 | 59 |
monoblast | 3.03e-11 | 59 |
promonocyte | 3.03e-11 | 59 |
myeloid leukocyte | 3.07e-11 | 72 |
macrophage dendritic cell progenitor | 1.52e-10 | 61 |
granulocyte monocyte progenitor cell | 2.45e-09 | 67 |
nongranular leukocyte | 2.98e-09 | 115 |
myeloid lineage restricted progenitor cell | 5.32e-09 | 66 |
leukocyte | 8.58e-09 | 136 |
intermediate monocyte | 7.90e-08 | 9 |
CD14-positive, CD16-positive monocyte | 7.90e-08 | 9 |
mature alpha-beta T cell | 6.59e-07 | 18 |
alpha-beta T cell | 6.59e-07 | 18 |
immature T cell | 6.59e-07 | 18 |
mature T cell | 6.59e-07 | 18 |
immature alpha-beta T cell | 6.59e-07 | 18 |
hematopoietic lineage restricted progenitor cell | 8.41e-07 | 120 |