FFCP PHASE1:Hg19::chr1:42800848..42800859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22887 | |EntrezGene=22887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29178 | |HGNC=29178 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPW0 | |UniProt=Q9UPW0 | ||
|association_with_transcript=26bp_to_NM_001198852_5end | |association_with_transcript=26bp_to_NM_001198852_5end | ||
|cluster_id=chr1:42800848..42800859,- | |||
|description=CAGE_peak_2_at_FOXJ3_5end | |description=CAGE_peak_2_at_FOXJ3_5end | ||
|id=chr1:42800848..42800859,- | |id=chr1:42800848..42800859,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.20e-10!235;DOID:14566!4.96e-09!239;DOID:0050686!1.90e-07!137;DOID:1240!9.59e-07!39 | |ontology_enrichment_disease=DOID:162!2.20e-10!235;DOID:14566!4.96e-09!239;DOID:0050686!1.90e-07!137;DOID:1240!9.59e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.84e-10,235;DOID:14566,7.20e-09,239;DOID:0050686,9.84e-08,137;DOID:1240,5.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.08e-15!57;UBERON:0005068!3.08e-15!57;UBERON:0006241!3.08e-15!57;UBERON:0007135!3.08e-15!57;UBERON:0000073!4.53e-15!94;UBERON:0001016!4.53e-15!94;UBERON:0001017!1.26e-14!82;UBERON:0003080!2.72e-14!42;UBERON:0005743!4.34e-14!86;UBERON:0002780!5.86e-14!41;UBERON:0001890!5.86e-14!41;UBERON:0006240!5.86e-14!41;UBERON:0007023!6.75e-14!115;UBERON:0000955!5.19e-13!69;UBERON:0006238!5.19e-13!69;UBERON:0002616!6.89e-13!59;UBERON:0001869!2.65e-12!32;UBERON:0001893!2.67e-12!34;UBERON:0002020!8.69e-12!34;UBERON:0003528!8.69e-12!34;UBERON:0002791!9.13e-12!33;UBERON:0001950!1.30e-10!20;UBERON:0002619!1.70e-10!22;UBERON:0000956!4.72e-10!25;UBERON:0000203!4.72e-10!25;UBERON:0002346!1.53e-09!90;UBERON:0003075!3.36e-09!86;UBERON:0007284!3.36e-09!86;UBERON:0003056!2.51e-08!61;UBERON:0000924!3.10e-07!173;UBERON:0006601!3.10e-07!173;UBERON:0004121!6.48e-07!169 | |ontology_enrichment_uberon=UBERON:0001049!3.08e-15!57;UBERON:0005068!3.08e-15!57;UBERON:0006241!3.08e-15!57;UBERON:0007135!3.08e-15!57;UBERON:0000073!4.53e-15!94;UBERON:0001016!4.53e-15!94;UBERON:0001017!1.26e-14!82;UBERON:0003080!2.72e-14!42;UBERON:0005743!4.34e-14!86;UBERON:0002780!5.86e-14!41;UBERON:0001890!5.86e-14!41;UBERON:0006240!5.86e-14!41;UBERON:0007023!6.75e-14!115;UBERON:0000955!5.19e-13!69;UBERON:0006238!5.19e-13!69;UBERON:0002616!6.89e-13!59;UBERON:0001869!2.65e-12!32;UBERON:0001893!2.67e-12!34;UBERON:0002020!8.69e-12!34;UBERON:0003528!8.69e-12!34;UBERON:0002791!9.13e-12!33;UBERON:0001950!1.30e-10!20;UBERON:0002619!1.70e-10!22;UBERON:0000956!4.72e-10!25;UBERON:0000203!4.72e-10!25;UBERON:0002346!1.53e-09!90;UBERON:0003075!3.36e-09!86;UBERON:0007284!3.36e-09!86;UBERON:0003056!2.51e-08!61;UBERON:0000924!3.10e-07!173;UBERON:0006601!3.10e-07!173;UBERON:0004121!6.48e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.16e-11;32!UBERON:0001950;8.75e-11;20!UBERON:0001893;1.19e-10;34!UBERON:0002619;1.62e-10;22!UBERON:0002791;2.54e-10;32!UBERON:0003528;3.35e-10;34!UBERON:0002020;3.35e-10;34!UBERON:0002780;4.43e-10;41!UBERON:0001890;4.43e-10;41!UBERON:0000956;4.77e-10;25!UBERON:0000203;4.77e-10;25!UBERON:0000073;4.39e-09;53!UBERON:0002616;4.39e-09;53 | |ontology_enrichment_uberon_v019=UBERON:0001869;4.16e-11;32!UBERON:0001950;8.75e-11;20!UBERON:0001893;1.19e-10;34!UBERON:0002619;1.62e-10;22!UBERON:0002791;2.54e-10;32!UBERON:0003528;3.35e-10;34!UBERON:0002020;3.35e-10;34!UBERON:0002780;4.43e-10;41!UBERON:0001890;4.43e-10;41!UBERON:0000956;4.77e-10;25!UBERON:0000203;4.77e-10;25!UBERON:0000073;4.39e-09;53!UBERON:0002616;4.39e-09;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.53e-15,53;UBERON:0002616,2.53e-15,53;UBERON:0001049,3.26e-15,56;UBERON:0005068,3.26e-15,56;UBERON:0006241,3.26e-15,56;UBERON:0007135,3.26e-15,56;UBERON:0001016,3.91e-15,89;UBERON:0001017,2.26e-14,81;UBERON:0002780,3.64e-14,41;UBERON:0001890,3.64e-14,41;UBERON:0003080,3.64e-14,41;UBERON:0006240,3.64e-14,41;UBERON:0007023,1.17e-13,114;UBERON:0000955,1.13e-12,68;UBERON:0006238,1.13e-12,68;UBERON:0001869,1.76e-12,32;UBERON:0001893,1.76e-12,34;UBERON:0003528,5.86e-12,34;UBERON:0002020,5.86e-12,34;UBERON:0002791,1.02e-11,32;UBERON:0001950,9.20e-11,20;UBERON:0002619,1.21e-10,22;UBERON:0000956,3.41e-10,25;UBERON:0000203,3.41e-10,25;UBERON:0002346,7.10e-10,86;UBERON:0003075,1.57e-09,82;UBERON:0007284,1.57e-09,82;UBERON:0003056,1.02e-08,61;UBERON:0010371,1.09e-08,104;UBERON:0004121,6.38e-07,171;UBERON:0000924,6.38e-07,171;UBERON:0006601,6.38e-07,171 | |||
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| ||
|short_description=p2@FOXJ3 | |short_description=p2@FOXJ3 | ||
}} | }} |
Latest revision as of 03:07, 18 September 2015
Short description: | p2@FOXJ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXJ3_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_NM_001198852_5end |
EntrezGene: | FOXJ3 |
HGNC: | 29178 |
UniProt: | Q9UPW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.53e-15 | 53 |
regional part of brain | 2.53e-15 | 53 |
neural tube | 3.26e-15 | 56 |
neural rod | 3.26e-15 | 56 |
future spinal cord | 3.26e-15 | 56 |
neural keel | 3.26e-15 | 56 |
nervous system | 3.91e-15 | 89 |
central nervous system | 2.26e-14 | 81 |
regional part of forebrain | 3.64e-14 | 41 |
forebrain | 3.64e-14 | 41 |
anterior neural tube | 3.64e-14 | 41 |
future forebrain | 3.64e-14 | 41 |
adult organism | 1.17e-13 | 114 |
brain | 1.13e-12 | 68 |
future brain | 1.13e-12 | 68 |
cerebral hemisphere | 1.76e-12 | 32 |
telencephalon | 1.76e-12 | 34 |
brain grey matter | 5.86e-12 | 34 |
gray matter | 5.86e-12 | 34 |
regional part of telencephalon | 1.02e-11 | 32 |
neocortex | 9.20e-11 | 20 |
regional part of cerebral cortex | 1.21e-10 | 22 |
cerebral cortex | 3.41e-10 | 25 |
pallium | 3.41e-10 | 25 |
neurectoderm | 7.10e-10 | 86 |
neural plate | 1.57e-09 | 82 |
presumptive neural plate | 1.57e-09 | 82 |
pre-chordal neural plate | 1.02e-08 | 61 |
ecto-epithelium | 1.09e-08 | 104 |
ectoderm-derived structure | 6.38e-07 | 171 |
ectoderm | 6.38e-07 | 171 |
presumptive ectoderm | 6.38e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.84e-10 | 235 |
disease of cellular proliferation | 7.20e-09 | 239 |
organ system cancer | 9.84e-08 | 137 |
leukemia | 5.85e-07 | 39 |