FFCP PHASE1:Hg19::chr19:13134457..13134462,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4784 | |EntrezGene=4784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7788 | |HGNC=7788 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-323bp_to_uc002mwe.2_5end | |association_with_transcript=-323bp_to_uc002mwe.2_5end | ||
|cluster_id=chr19:13134457..13134462,+ | |||
|coexpression_cluster_id=C3753 | |coexpression_cluster_id=C3753 | ||
|description=CAGE_peak_5_at_NFIX_5end | |description=CAGE_peak_5_at_NFIX_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.42e-27!180;CL:0000057!2.53e-12!75;CL:0000680!2.66e-11!57;CL:0000056!2.66e-11!57;CL:0000355!2.66e-11!57;CL:0000187!8.25e-11!54;CL:0000393!3.39e-10!60;CL:0000211!3.39e-10!60;CL:0000183!1.24e-09!59;CL:0000192!1.96e-08!42;CL:0000514!1.96e-08!42 | |ontology_enrichment_celltype=CL:0000055!3.42e-27!180;CL:0000057!2.53e-12!75;CL:0000680!2.66e-11!57;CL:0000056!2.66e-11!57;CL:0000355!2.66e-11!57;CL:0000187!8.25e-11!54;CL:0000393!3.39e-10!60;CL:0000211!3.39e-10!60;CL:0000183!1.24e-09!59;CL:0000192!1.96e-08!42;CL:0000514!1.96e-08!42 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.21e-12,76;CL:0000680,1.85e-10,58;CL:0000056,1.85e-10,58;CL:0000355,1.85e-10,58;CL:0000187,6.61e-10,55;CL:0000393,9.21e-10,61;CL:0000211,9.21e-10,61;CL:0000192,1.24e-07,43;CL:0000514,1.24e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.06e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.06e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.20e-16;34!UBERON:0003528;2.96e-16;34!UBERON:0002020;2.96e-16;34!UBERON:0001869;4.93e-16;32!UBERON:0002791;5.17e-16;32!UBERON:0000073;3.91e-15;53!UBERON:0002616;3.91e-15;53!UBERON:0000956;1.48e-14;25!UBERON:0000203;1.48e-14;25!UBERON:0002780;4.81e-14;41!UBERON:0001890;4.81e-14;41!UBERON:0002619;2.52e-13;22!UBERON:0001950;3.62e-12;20!UBERON:0000955;7.45e-12;68!UBERON:0001017;2.48e-11;75!UBERON:0001016;4.92e-11;83!UBERON:0004732;3.07e-08;13!UBERON:0004733;1.70e-07;12!UBERON:0002028;1.70e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001893;1.20e-16;34!UBERON:0003528;2.96e-16;34!UBERON:0002020;2.96e-16;34!UBERON:0001869;4.93e-16;32!UBERON:0002791;5.17e-16;32!UBERON:0000073;3.91e-15;53!UBERON:0002616;3.91e-15;53!UBERON:0000956;1.48e-14;25!UBERON:0000203;1.48e-14;25!UBERON:0002780;4.81e-14;41!UBERON:0001890;4.81e-14;41!UBERON:0002619;2.52e-13;22!UBERON:0001950;3.62e-12;20!UBERON:0000955;7.45e-12;68!UBERON:0001017;2.48e-11;75!UBERON:0001016;4.92e-11;83!UBERON:0004732;3.07e-08;13!UBERON:0004733;1.70e-07;12!UBERON:0002028;1.70e-07;12 | ||
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|phase1_expression=2.72517568905835,4.06790995392868,6.20199378022273,3.00219895059391,2.23480547213644,0.872338524100369,0,3.15859936713415,5.48489819219661,0.982935746006035,0,0,0,5.81701858912219,6.2965501388304,7.39557661096953,2.41077811209591,6.57279081348636,3.41552959153355,7.1410213684537,6.12002073732759,7.8363680369522,8.30084362680065,7.25434452886286,2.38531015230125,0,0.0821005894499457,0,0,0,0,0.919421224478927,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,5.36560687762909,3.58015173161885,6.14446559053763,7.01873074890245,5.35932120155048,11.9292892057665,4.86634870302636,3.11964896641424,1.99556457716308,0.43917392846563,2.35762335895883,0,1.11235332835329,0,0.174129737299267,0,0,0,0,2.98143611050058,1.72046919021225,2.08284300964557,1.13061588384802,1.25849830862972,1.6507082516404,0.417989933073621,0,0,0,0,0.760272105718513,1.22031028774085,0,2.43042584364528,1.07159673940896,1.57170560838319,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,1.3082821564276,6.46063537203914,4.05217637326655,3.57504788195691,3.72887606973458,3.54668382198357,1.12135520028461,1.06748995729705,1.48000529050296,5.91300967259556,0.67355336034844,0.653847612453835,2.57307626996383,2.88087962239999,2.81185718200556,3.43376084513353,5.13424639390004,2.24173020827702,0.822041490506354,0.647491777472526,1.12360645361799,9.39109187772509,4.54486974053541,7.12947890112782,4.75201142912821,6.67620709052104,8.19145225744224,12.2165084108761,5.21841953257605,2.00189631795143,6.64953877162039,5.70670907145089,5.51678032438235,2.40380894250555,0.680593098960126,2.51145489964407,6.40672166455702,5.08636562782948,3.60109315301283,4.74041634496819,2.57640540045629,7.258557396932,2.53164498361899,3.70260619612555,0.757301322732344,0.0920498986422993,5.33431987502079,1.06502877754984,4.23158812556089,2.37384829234683,0,0,0,0,0,0,0,0,0,0,9.64861407289328,4.14404764057442,8.8229906326076,10.8281922250438,0,0,0,0,0,0,0,0,0,0,4.20725321410337,5.3504621473082,0,1.26755034821831,0,0.590789906681404,0,0,2.57351715447788,0.658501712451753,1.1240175325762,0.804231779293047,0.833296006426766,0.977424915930974,2.07986957055916,2.88662684050547,3.36198174427723,1.6437217193015,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0.283550194484773,2.7763142037883,1.74380363108377,0,0.492663237895943,0.088048434013226,0.207328115540772,0.288239906833923,0.37872730027914,0.063497894292169,0.763976851116555,0,0,0.102827492703324,1.20137223137567,0.285826432630578,1.23344192779897,0.87192013766656,1.10007428731425,2.32689088364,35.7656445851882,0,2.39344304926383,1.04007436911366,7.45901385360212,0,7.19339883343468,3.14551586047925,4.88359444852299,1.64648067356154,0.325736184293735,1.06617584622764,2.37585561880029,3.01439377059586,1.74306691720059,1.79951384127703,0,0,0,3.83399768786532,4.59447743336456,5.70547620162874,2.75084482668401,3.08214483825575,2.68591444859843,0.112085143993527,0,0,0,5.08189248444927,24.7265722329481,3.86644406388848,17.0866590641036,5.74144876487847,0,0,0,6.01188309423785,0.500170521059677,2.98391526069709,7.48695101510906,7.67244651827796,4.57337003598411,4.33423235473039,8.72743689210385,6.82222512167955,2.0694614258501,8.63493278096067,3.68738337083406,4.34418072340414,2.34961388955289,0.343143423810856,0,0,0,0,0,0,5.45837177201309,3.52962538562544,10.1037633995906,7.30393150757495,7.16390148693385,2.41280881715411,0,0,2.13074070375753,4.18848495670427,5.71179872101983,0.348631135379878,0,2.6065841139427,0.736647911487171,3.3296189967736,1.45672934405374,1.31124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,1.03041011647722,1.09883357782012,1.15513299888823,0.574265537996172,0.650060246036521,1.6068392984416,5.99358453411156,1.69453478826109,1.68854042198743,1.10269257987624,5.6932729780185,7.68588477745411,0.767039646744908,5.78708231703793,0.165284915360978,0.384380134730212,0.127612712494584,0,1.39453664789186,2.83331112147576,4.8792608911242,2.46426864140871,2.66153015158511,5.21959795245044,9.63685939340384,0.715624433709956,1.116475108079,1.58189712359363,1.33441135746677,5.37385361753801,3.85145089230528,17.1829753880006,0.78494864019923,1.2591072030832,1.92175920815238,1.7671860351853,3.63928466831969,4.75530963519025,0.842516912477962,3.90106991271672,3.89941583410055,4.22600587027022,0.682499557039929,5.5148118461948,19.2113798254413,13.232768245107,0.66343897524122,3.06915619677634,12.1542862196004,5.9030527684197,3.85529716229138,1.239293992399,3.3803472303869,1.00387946542836,0.589494246078727,3.21003946333125,5.67617702512956,6.96655196482292,4.93942339439853,3.41525856389144,6.64875968465468,0.962221127255121,0,0,1.41215701165169,0,0,0.443430153536676,0,0,1.52927441428475,0.5696471871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| ||
|short_description=p5@NFIX | |short_description=p5@NFIX | ||
}} | }} |
Latest revision as of 23:06, 15 September 2015
Short description: | p5@NFIX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NFIX_5end |
Coexpression cluster: | C3753_parietal_brain_occipital_Mesenchymal_cerebellum_Neural_temporal |
Association with transcript: | -323bp_to_uc002mwe.2_5end |
EntrezGene: | NFIX |
HGNC: | 7788 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.21e-12 | 76 |
muscle precursor cell | 1.85e-10 | 58 |
myoblast | 1.85e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-10 | 58 |
muscle cell | 6.61e-10 | 55 |
electrically responsive cell | 9.21e-10 | 61 |
electrically active cell | 9.21e-10 | 61 |
smooth muscle cell | 1.24e-07 | 43 |
smooth muscle myoblast | 1.24e-07 | 43 |