FFCP PHASE1:Hg19::chr20:62284766..62284785,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50861 | |EntrezGene=50861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15926 | |HGNC=15926 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZ72 | |UniProt=Q9NZ72 | ||
|association_with_transcript=0bp_to_ENST00000370053,NM_015894,uc002yfr.1,uc011abb.1_5end | |association_with_transcript=0bp_to_ENST00000370053,NM_015894,uc002yfr.1,uc011abb.1_5end | ||
|cluster_id=chr20:62284766..62284785,- | |||
|coexpression_cluster_id=C4063 | |coexpression_cluster_id=C4063 | ||
|description=CAGE_peak_1_at_STMN3_5end | |description=CAGE_peak_1_at_STMN3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.09e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.09e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.07e-32!94;UBERON:0001016!1.07e-32!94;UBERON:0005743!3.56e-32!86;UBERON:0001017!8.58e-32!82;UBERON:0002346!1.11e-29!90;UBERON:0001049!7.14e-29!57;UBERON:0005068!7.14e-29!57;UBERON:0006241!7.14e-29!57;UBERON:0007135!7.14e-29!57;UBERON:0003075!4.81e-28!86;UBERON:0007284!4.81e-28!86;UBERON:0000955!2.86e-26!69;UBERON:0006238!2.86e-26!69;UBERON:0002616!6.27e-26!59;UBERON:0002780!6.77e-22!41;UBERON:0001890!6.77e-22!41;UBERON:0006240!6.77e-22!41;UBERON:0003056!1.57e-21!61;UBERON:0003080!3.23e-21!42;UBERON:0000924!7.22e-20!173;UBERON:0006601!7.22e-20!173;UBERON:0002020!3.08e-19!34;UBERON:0003528!3.08e-19!34;UBERON:0001893!8.41e-19!34;UBERON:0001869!9.75e-19!32;UBERON:0004121!1.61e-18!169;UBERON:0002791!3.16e-18!33;UBERON:0000153!3.51e-17!129;UBERON:0007811!3.51e-17!129;UBERON:0000033!1.64e-16!123;UBERON:0002619!2.54e-15!22;UBERON:0007023!4.82e-15!115;UBERON:0000956!5.49e-15!25;UBERON:0000203!5.49e-15!25;UBERON:0001950!4.51e-14!20;UBERON:0000119!5.53e-13!312;UBERON:0000475!1.48e-12!365;UBERON:0000025!1.71e-12!194;UBERON:0000483!3.38e-12!309;UBERON:0000481!5.13e-09!347;UBERON:0000064!7.17e-09!219;UBERON:0003076!8.93e-09!15;UBERON:0003057!8.93e-09!15;UBERON:0004111!3.53e-08!241;UBERON:0000477!8.51e-08!286;UBERON:0004732!9.40e-08!13;UBERON:0004733!2.34e-07!12;UBERON:0002028!2.34e-07!12;UBERON:0007277!2.34e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!1.07e-32!94;UBERON:0001016!1.07e-32!94;UBERON:0005743!3.56e-32!86;UBERON:0001017!8.58e-32!82;UBERON:0002346!1.11e-29!90;UBERON:0001049!7.14e-29!57;UBERON:0005068!7.14e-29!57;UBERON:0006241!7.14e-29!57;UBERON:0007135!7.14e-29!57;UBERON:0003075!4.81e-28!86;UBERON:0007284!4.81e-28!86;UBERON:0000955!2.86e-26!69;UBERON:0006238!2.86e-26!69;UBERON:0002616!6.27e-26!59;UBERON:0002780!6.77e-22!41;UBERON:0001890!6.77e-22!41;UBERON:0006240!6.77e-22!41;UBERON:0003056!1.57e-21!61;UBERON:0003080!3.23e-21!42;UBERON:0000924!7.22e-20!173;UBERON:0006601!7.22e-20!173;UBERON:0002020!3.08e-19!34;UBERON:0003528!3.08e-19!34;UBERON:0001893!8.41e-19!34;UBERON:0001869!9.75e-19!32;UBERON:0004121!1.61e-18!169;UBERON:0002791!3.16e-18!33;UBERON:0000153!3.51e-17!129;UBERON:0007811!3.51e-17!129;UBERON:0000033!1.64e-16!123;UBERON:0002619!2.54e-15!22;UBERON:0007023!4.82e-15!115;UBERON:0000956!5.49e-15!25;UBERON:0000203!5.49e-15!25;UBERON:0001950!4.51e-14!20;UBERON:0000119!5.53e-13!312;UBERON:0000475!1.48e-12!365;UBERON:0000025!1.71e-12!194;UBERON:0000483!3.38e-12!309;UBERON:0000481!5.13e-09!347;UBERON:0000064!7.17e-09!219;UBERON:0003076!8.93e-09!15;UBERON:0003057!8.93e-09!15;UBERON:0004111!3.53e-08!241;UBERON:0000477!8.51e-08!286;UBERON:0004732!9.40e-08!13;UBERON:0004733!2.34e-07!12;UBERON:0002028!2.34e-07!12;UBERON:0007277!2.34e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.90e-17;32!UBERON:0003528;8.78e-17;34!UBERON:0002020;8.78e-17;34!UBERON:0002791;1.39e-16;32!UBERON:0001893;1.93e-16;34!UBERON:0002780;5.63e-16;41!UBERON:0001890;5.63e-16;41!UBERON:0000073;1.01e-15;53!UBERON:0002616;1.01e-15;53!UBERON:0002619;2.21e-15;22!UBERON:0000956;4.58e-15;25!UBERON:0000203;4.58e-15;25!UBERON:0001950;3.96e-14;20!UBERON:0000955;4.43e-13;68!UBERON:0001016;3.49e-12;83!UBERON:0001017;6.58e-12;75!UBERON:0004732;9.07e-08;13!UBERON:0004733;2.26e-07;12!UBERON:0002028;2.26e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0001869;3.90e-17;32!UBERON:0003528;8.78e-17;34!UBERON:0002020;8.78e-17;34!UBERON:0002791;1.39e-16;32!UBERON:0001893;1.93e-16;34!UBERON:0002780;5.63e-16;41!UBERON:0001890;5.63e-16;41!UBERON:0000073;1.01e-15;53!UBERON:0002616;1.01e-15;53!UBERON:0002619;2.21e-15;22!UBERON:0000956;4.58e-15;25!UBERON:0000203;4.58e-15;25!UBERON:0001950;3.96e-14;20!UBERON:0000955;4.43e-13;68!UBERON:0001016;3.49e-12;83!UBERON:0001017;6.58e-12;75!UBERON:0004732;9.07e-08;13!UBERON:0004733;2.26e-07;12!UBERON:0002028;2.26e-07;12 | ||
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| ||
|short_description=p1@STMN3 | |short_description=p1@STMN3 | ||
}} | }} |
Latest revision as of 13:45, 17 September 2015
Short description: | p1@STMN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STMN3_5end |
Coexpression cluster: | C4063_alveolar_medial_occipital_brain_olfactory_amygdala_hippocampus |
Association with transcript: | 0bp_to_ENST00000370053, NM_015894, uc002yfr.1, uc011abb.1_5end |
EntrezGene: | STMN3 |
HGNC: | 15926 |
UniProt: | Q9NZ72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data