FFCP PHASE1:Hg19::chr8:53853672..53853682,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC033145_5end | |association_with_transcript=0bp_to_BC033145_5end | ||
|cluster_id=chr8:53853672..53853682,- | |||
|coexpression_cluster_id=C1408 | |coexpression_cluster_id=C1408 | ||
|description=CAGE_peak_1_at_BC033145_5end | |description=CAGE_peak_1_at_BC033145_5end | ||
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|ontology_enrichment_celltype=CL:0000064!4.77e-20!3;CL:0005012!4.77e-20!3;CL:0000067!4.77e-20!3;CL:0002304!4.77e-20!3;CL:0002586!1.02e-19!3;CL:0000147!1.46e-15!14;CL:0000149!6.28e-15!4;CL:0000306!6.89e-15!4;CL:0002222!6.89e-15!4;CL:0002224!6.89e-15!4;CL:0000075!1.04e-13!27;CL:0000325!1.56e-11!39;CL:0000066!3.56e-08!254;CL:0000342!6.59e-08!1;CL:0002565!6.59e-08!1;CL:0000710!1.27e-07!20;CL:1001319!1.61e-07!1;CL:1000600!1.61e-07!1 | |ontology_enrichment_celltype=CL:0000064!4.77e-20!3;CL:0005012!4.77e-20!3;CL:0000067!4.77e-20!3;CL:0002304!4.77e-20!3;CL:0002586!1.02e-19!3;CL:0000147!1.46e-15!14;CL:0000149!6.28e-15!4;CL:0000306!6.89e-15!4;CL:0002222!6.89e-15!4;CL:0002224!6.89e-15!4;CL:0000075!1.04e-13!27;CL:0000325!1.56e-11!39;CL:0000066!3.56e-08!254;CL:0000342!6.59e-08!1;CL:0002565!6.59e-08!1;CL:0000710!1.27e-07!20;CL:1001319!1.61e-07!1;CL:1000600!1.61e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.28e-84;3!CL:0000067;1.28e-84;3!CL:0005012;1.28e-84;3!CL:0002304;1.28e-84;3!CL:0002586;1.98e-38;3!CL:0000342;7.48e-30;1!CL:0002565;7.48e-30;1!CL:0000149;3.92e-29;4!CL:0000147;5.91e-19;14!CL:0000075;3.27e-17;27!CL:0000710;1.84e-13;20!CL:0000306;2.52e-08;4!CL:0002222;2.52e-08;4!CL:0002224;2.52e-08;4!CL:0002077;2.62e-08;34 | |ontology_enrichment_celltype_v019=CL:0000064;1.28e-84;3!CL:0000067;1.28e-84;3!CL:0005012;1.28e-84;3!CL:0002304;1.28e-84;3!CL:0002586;1.98e-38;3!CL:0000342;7.48e-30;1!CL:0002565;7.48e-30;1!CL:0000149;3.92e-29;4!CL:0000147;5.91e-19;14!CL:0000075;3.27e-17;27!CL:0000710;1.84e-13;20!CL:0000306;2.52e-08;4!CL:0002222;2.52e-08;4!CL:0002224;2.52e-08;4!CL:0002077;2.62e-08;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.28e-84,3;CL:0000067,1.28e-84,3;CL:0005012,1.28e-84,3;CL:0002304,1.28e-84,3;CL:0002586,1.80e-38,3;CL:0000342,7.48e-30,1;CL:0002565,7.48e-30,1;CL:0000149,3.65e-29,4;CL:0000147,5.73e-19,14;CL:0000075,3.34e-17,27;CL:0000710,1.84e-13,20;CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4;CL:0002077,3.32e-08,34 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!4.51e-07!14 | |ontology_enrichment_disease=DOID:1749!4.51e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!2.74e-56!11;UBERON:0000019!7.52e-32!19;UBERON:0000047!7.52e-32!19;UBERON:0004088!7.52e-32!19;UBERON:0003072!7.52e-32!19;UBERON:0003071!7.52e-32!19;UBERON:0004128!7.52e-32!19;UBERON:0000020!1.96e-31!23;UBERON:0000970!3.61e-30!20;UBERON:0001032!4.89e-30!24;UBERON:0004456!4.89e-30!24;UBERON:0002104!1.20e-28!21;UBERON:0001456!1.20e-28!21;UBERON:0000488!3.29e-26!4;UBERON:0005085!1.62e-24!29;UBERON:0001801!1.26e-21!14;UBERON:0001778!4.77e-20!3;UBERON:0001775!4.77e-20!3;UBERON:0001781!1.02e-19!3;UBERON:0001782!1.02e-19!3;UBERON:0005424!1.02e-19!3;UBERON:0001444!1.40e-19!48;UBERON:0002203!1.54e-17!6;UBERON:0001768!1.54e-17!6;UBERON:0010077!6.89e-15!4;UBERON:0005389!6.89e-15!4;UBERON:0000484!6.89e-15!4;UBERON:0002546!6.89e-15!4;UBERON:0000965!6.89e-15!4;UBERON:0001803!6.89e-15!4;UBERON:0003073!6.89e-15!4;UBERON:0005426!6.89e-15!4;UBERON:0000076!7.45e-13!8;UBERON:0000966!4.81e-12!5;UBERON:0005388!4.81e-12!5;UBERON:0001802!4.81e-12!5;UBERON:0000063!2.05e-11!97;UBERON:0003056!2.66e-10!61;UBERON:0000064!3.72e-10!219;UBERON:0002200!1.29e-09!11;UBERON:0006876!1.29e-09!11;UBERON:0002506!6.59e-08!1;UBERON:0001769!6.59e-08!1;UBERON:0007029!1.03e-07!1;UBERON:0002346!1.12e-07!90;UBERON:0004645!1.61e-07!1;UBERON:0001256!1.61e-07!1;UBERON:0001259!1.61e-07!1;UBERON:0000997!4.09e-07!1;UBERON:0005056!4.09e-07!1;UBERON:0003343!4.77e-07!4;UBERON:0004785!4.77e-07!4;UBERON:0000033!5.30e-07!123;UBERON:0003075!9.25e-07!86;UBERON:0007284!9.25e-07!86;UBERON:0000924!9.32e-07!173;UBERON:0006601!9.32e-07!173 | |ontology_enrichment_uberon=UBERON:0007625!2.74e-56!11;UBERON:0000019!7.52e-32!19;UBERON:0000047!7.52e-32!19;UBERON:0004088!7.52e-32!19;UBERON:0003072!7.52e-32!19;UBERON:0003071!7.52e-32!19;UBERON:0004128!7.52e-32!19;UBERON:0000020!1.96e-31!23;UBERON:0000970!3.61e-30!20;UBERON:0001032!4.89e-30!24;UBERON:0004456!4.89e-30!24;UBERON:0002104!1.20e-28!21;UBERON:0001456!1.20e-28!21;UBERON:0000488!3.29e-26!4;UBERON:0005085!1.62e-24!29;UBERON:0001801!1.26e-21!14;UBERON:0001778!4.77e-20!3;UBERON:0001775!4.77e-20!3;UBERON:0001781!1.02e-19!3;UBERON:0001782!1.02e-19!3;UBERON:0005424!1.02e-19!3;UBERON:0001444!1.40e-19!48;UBERON:0002203!1.54e-17!6;UBERON:0001768!1.54e-17!6;UBERON:0010077!6.89e-15!4;UBERON:0005389!6.89e-15!4;UBERON:0000484!6.89e-15!4;UBERON:0002546!6.89e-15!4;UBERON:0000965!6.89e-15!4;UBERON:0001803!6.89e-15!4;UBERON:0003073!6.89e-15!4;UBERON:0005426!6.89e-15!4;UBERON:0000076!7.45e-13!8;UBERON:0000966!4.81e-12!5;UBERON:0005388!4.81e-12!5;UBERON:0001802!4.81e-12!5;UBERON:0000063!2.05e-11!97;UBERON:0003056!2.66e-10!61;UBERON:0000064!3.72e-10!219;UBERON:0002200!1.29e-09!11;UBERON:0006876!1.29e-09!11;UBERON:0002506!6.59e-08!1;UBERON:0001769!6.59e-08!1;UBERON:0007029!1.03e-07!1;UBERON:0002346!1.12e-07!90;UBERON:0004645!1.61e-07!1;UBERON:0001256!1.61e-07!1;UBERON:0001259!1.61e-07!1;UBERON:0000997!4.09e-07!1;UBERON:0005056!4.09e-07!1;UBERON:0003343!4.77e-07!4;UBERON:0004785!4.77e-07!4;UBERON:0000033!5.30e-07!123;UBERON:0003075!9.25e-07!86;UBERON:0007284!9.25e-07!86;UBERON:0000924!9.32e-07!173;UBERON:0006601!9.32e-07!173 | ||
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|short_description=p1@BC033145 | |short_description=p1@BC033145 | ||
}} | }} |
Latest revision as of 18:51, 31 July 2015
Short description: | p1@BC033145 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC033145_5end |
Coexpression cluster: | C1408_Iris_Ciliary_Lens_Retinal_Astrocyte_Smooth_testicular |
Association with transcript: | 0bp_to_BC033145_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.28e-84 | 3 |
ciliated epithelial cell | 1.28e-84 | 3 |
multi-ciliated epithelial cell | 1.28e-84 | 3 |
non-pigmented ciliary epithelial cell | 1.28e-84 | 3 |
retinal pigment epithelial cell | 1.80e-38 | 3 |
pigment cell (sensu Vertebrata) | 7.48e-30 | 1 |
iris pigment epithelial cell | 7.48e-30 | 1 |
visual pigment cell | 3.65e-29 | 4 |
pigment cell | 5.73e-19 | 14 |
columnar/cuboidal epithelial cell | 3.34e-17 | 27 |
neurecto-epithelial cell | 1.84e-13 | 20 |
crystallin accumulating cell | 2.61e-08 | 4 |
vertebrate lens cell | 2.61e-08 | 4 |
lens epithelial cell | 2.61e-08 | 4 |
ecto-epithelial cell | 3.32e-08 | 34 |