FFCP PHASE1:Hg19::chr2:196521903..196521986,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57181 | |EntrezGene=57181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20861 | |HGNC=20861 | ||
|TSSclassifier=strong | |||
|UniProt=B4DGU0 | |UniProt=B4DGU0 | ||
|association_with_transcript=0bp_to_ENST00000464301,ENST00000541054_5end | |association_with_transcript=0bp_to_ENST00000464301,ENST00000541054_5end | ||
|cluster_id=chr2:196521903..196521986,+ | |||
|description=CAGE_peak_1_at_SLC39A10_5end | |description=CAGE_peak_1_at_SLC39A10_5end | ||
|id=chr2:196521903..196521986,+ | |id=chr2:196521903..196521986,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.10e-08!235;DOID:0050687!3.89e-08!143;DOID:14566!7.18e-08!239;DOID:305!7.02e-07!106 | |ontology_enrichment_disease=DOID:162!1.10e-08!235;DOID:0050687!3.89e-08!143;DOID:14566!7.18e-08!239;DOID:305!7.02e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.10e-08,235;DOID:0050687,3.89e-08,143;DOID:14566,7.18e-08,239;DOID:305,7.02e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.79e-19!86;UBERON:0001017!5.53e-19!82;UBERON:0000073!1.81e-18!94;UBERON:0001016!1.81e-18!94;UBERON:0001869!3.60e-15!32;UBERON:0002780!7.70e-15!41;UBERON:0001890!7.70e-15!41;UBERON:0006240!7.70e-15!41;UBERON:0000955!1.16e-14!69;UBERON:0006238!1.16e-14!69;UBERON:0002020!1.36e-14!34;UBERON:0003528!1.36e-14!34;UBERON:0003080!1.96e-14!42;UBERON:0001049!4.40e-14!57;UBERON:0005068!4.40e-14!57;UBERON:0006241!4.40e-14!57;UBERON:0007135!4.40e-14!57;UBERON:0001893!5.83e-14!34;UBERON:0002616!1.70e-13!59;UBERON:0002346!2.27e-13!90;UBERON:0002791!2.39e-13!33;UBERON:0003075!2.77e-13!86;UBERON:0007284!2.77e-13!86;UBERON:0003056!1.52e-12!61;UBERON:0000956!2.46e-12!25;UBERON:0000203!2.46e-12!25;UBERON:0000924!4.24e-12!173;UBERON:0006601!4.24e-12!173;UBERON:0000153!6.58e-12!129;UBERON:0007811!6.58e-12!129;UBERON:0004121!6.92e-12!169;UBERON:0002619!1.21e-11!22;UBERON:0000033!1.30e-11!123;UBERON:0001950!1.12e-10!20 | |ontology_enrichment_uberon=UBERON:0005743!1.79e-19!86;UBERON:0001017!5.53e-19!82;UBERON:0000073!1.81e-18!94;UBERON:0001016!1.81e-18!94;UBERON:0001869!3.60e-15!32;UBERON:0002780!7.70e-15!41;UBERON:0001890!7.70e-15!41;UBERON:0006240!7.70e-15!41;UBERON:0000955!1.16e-14!69;UBERON:0006238!1.16e-14!69;UBERON:0002020!1.36e-14!34;UBERON:0003528!1.36e-14!34;UBERON:0003080!1.96e-14!42;UBERON:0001049!4.40e-14!57;UBERON:0005068!4.40e-14!57;UBERON:0006241!4.40e-14!57;UBERON:0007135!4.40e-14!57;UBERON:0001893!5.83e-14!34;UBERON:0002616!1.70e-13!59;UBERON:0002346!2.27e-13!90;UBERON:0002791!2.39e-13!33;UBERON:0003075!2.77e-13!86;UBERON:0007284!2.77e-13!86;UBERON:0003056!1.52e-12!61;UBERON:0000956!2.46e-12!25;UBERON:0000203!2.46e-12!25;UBERON:0000924!4.24e-12!173;UBERON:0006601!4.24e-12!173;UBERON:0000153!6.58e-12!129;UBERON:0007811!6.58e-12!129;UBERON:0004121!6.92e-12!169;UBERON:0002619!1.21e-11!22;UBERON:0000033!1.30e-11!123;UBERON:0001950!1.12e-10!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.67e-14;32!UBERON:0003528;4.09e-13;34!UBERON:0002020;4.09e-13;34!UBERON:0002791;5.08e-13;32!UBERON:0001893;2.02e-12;34!UBERON:0000956;2.22e-12;25!UBERON:0000203;2.22e-12;25!UBERON:0002619;1.08e-11;22!UBERON:0002780;7.56e-11;41!UBERON:0001890;7.56e-11;41!UBERON:0001950;9.82e-11;20!UBERON:0000073;1.93e-08;53!UBERON:0002616;1.93e-08;53!UBERON:0001017;8.51e-08;75!UBERON:0000955;2.76e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0001869;6.67e-14;32!UBERON:0003528;4.09e-13;34!UBERON:0002020;4.09e-13;34!UBERON:0002791;5.08e-13;32!UBERON:0001893;2.02e-12;34!UBERON:0000956;2.22e-12;25!UBERON:0000203;2.22e-12;25!UBERON:0002619;1.08e-11;22!UBERON:0002780;7.56e-11;41!UBERON:0001890;7.56e-11;41!UBERON:0001950;9.82e-11;20!UBERON:0000073;1.93e-08;53!UBERON:0002616;1.93e-08;53!UBERON:0001017;8.51e-08;75!UBERON:0000955;2.76e-07;68 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.86e-19,81;UBERON:0001016,3.38e-18,89;UBERON:0001869,3.60e-15,32;UBERON:0000955,6.33e-15,68;UBERON:0006238,6.33e-15,68;UBERON:0002780,7.70e-15,41;UBERON:0001890,7.70e-15,41;UBERON:0003080,7.70e-15,41;UBERON:0006240,7.70e-15,41;UBERON:0003528,1.36e-14,34;UBERON:0002020,1.36e-14,34;UBERON:0001049,2.19e-14,56;UBERON:0005068,2.19e-14,56;UBERON:0006241,2.19e-14,56;UBERON:0007135,2.19e-14,56;UBERON:0002791,4.81e-14,32;UBERON:0000073,5.47e-14,53;UBERON:0002616,5.47e-14,53;UBERON:0001893,5.83e-14,34;UBERON:0000956,2.46e-12,25;UBERON:0000203,2.46e-12,25;UBERON:0003056,4.70e-12,61;UBERON:0002619,1.21e-11,22;UBERON:0002346,1.44e-11,86;UBERON:0003075,1.83e-11,82;UBERON:0007284,1.83e-11,82;UBERON:0004121,4.57e-11,171;UBERON:0000924,4.57e-11,171;UBERON:0006601,4.57e-11,171;UBERON:0001950,1.12e-10,20;UBERON:0011216,1.03e-09,223;UBERON:0010371,8.52e-09,104;UBERON:0010314,8.56e-08,132 | |||
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| ||
|short_description=p1@SLC39A10 | |short_description=p1@SLC39A10 | ||
}} | }} |
Latest revision as of 06:11, 19 September 2015
Short description: | p1@SLC39A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC39A10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464301, ENST00000541054_5end |
EntrezGene: | SLC39A10 |
HGNC: | 20861 |
UniProt: | B4DGU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.86e-19 | 81 |
nervous system | 3.38e-18 | 89 |
cerebral hemisphere | 3.60e-15 | 32 |
brain | 6.33e-15 | 68 |
future brain | 6.33e-15 | 68 |
regional part of forebrain | 7.70e-15 | 41 |
forebrain | 7.70e-15 | 41 |
anterior neural tube | 7.70e-15 | 41 |
future forebrain | 7.70e-15 | 41 |
brain grey matter | 1.36e-14 | 34 |
gray matter | 1.36e-14 | 34 |
neural tube | 2.19e-14 | 56 |
neural rod | 2.19e-14 | 56 |
future spinal cord | 2.19e-14 | 56 |
neural keel | 2.19e-14 | 56 |
regional part of telencephalon | 4.81e-14 | 32 |
regional part of nervous system | 5.47e-14 | 53 |
regional part of brain | 5.47e-14 | 53 |
telencephalon | 5.83e-14 | 34 |
cerebral cortex | 2.46e-12 | 25 |
pallium | 2.46e-12 | 25 |
pre-chordal neural plate | 4.70e-12 | 61 |
regional part of cerebral cortex | 1.21e-11 | 22 |
neurectoderm | 1.44e-11 | 86 |
neural plate | 1.83e-11 | 82 |
presumptive neural plate | 1.83e-11 | 82 |
ectoderm-derived structure | 4.57e-11 | 171 |
ectoderm | 4.57e-11 | 171 |
presumptive ectoderm | 4.57e-11 | 171 |
neocortex | 1.12e-10 | 20 |
organ system subdivision | 1.03e-09 | 223 |
ecto-epithelium | 8.52e-09 | 104 |
structure with developmental contribution from neural crest | 8.56e-08 | 132 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.10e-08 | 235 |
cell type cancer | 3.89e-08 | 143 |
disease of cellular proliferation | 7.18e-08 | 239 |
carcinoma | 7.02e-07 | 106 |