FFCP PHASE1:Hg19::chr2:162273241..162273253,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10716 | |EntrezGene=10716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11590 | |HGNC=11590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=399bp_to_ENST00000463544_5end | |association_with_transcript=399bp_to_ENST00000463544_5end | ||
|cluster_id=chr2:162273241..162273253,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_4_at_TBR1_5end | |description=CAGE_peak_4_at_TBR1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!4.76e-13!8;CL:0000540!7.89e-07!6;CL:0000031!7.89e-07!6;CL:0000404!7.89e-07!6 | |ontology_enrichment_celltype=CL:0000047!4.76e-13!8;CL:0000540!7.89e-07!6;CL:0000031!7.89e-07!6;CL:0000404!7.89e-07!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.28e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.98e-10;82!UBERON:0006238;6.17e-09;10 | |ontology_enrichment_development_v019=UBERON:0006601;2.98e-10;82!UBERON:0006238;6.17e-09;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!5.47e-89!22;UBERON:0001950!3.30e-81!20;UBERON:0000956!4.32e-78!25;UBERON:0000203!4.32e-78!25;UBERON:0001869!2.72e-72!32;UBERON:0001893!8.02e-68!34;UBERON:0002020!2.17e-67!34;UBERON:0003528!2.17e-67!34;UBERON:0002791!5.58e-64!33;UBERON:0005743!2.23e-60!86;UBERON:0001017!4.20e-60!82;UBERON:0000073!3.59e-57!94;UBERON:0001016!3.59e-57!94;UBERON:0002780!1.58e-55!41;UBERON:0001890!1.58e-55!41;UBERON:0006240!1.58e-55!41;UBERON:0003080!4.24e-54!42;UBERON:0000955!2.81e-49!69;UBERON:0006238!2.81e-49!69;UBERON:0001049!2.30e-45!57;UBERON:0005068!2.30e-45!57;UBERON:0006241!2.30e-45!57;UBERON:0007135!2.30e-45!57;UBERON:0002616!1.22e-43!59;UBERON:0003056!7.99e-39!61;UBERON:0003075!4.78e-33!86;UBERON:0007284!4.78e-33!86;UBERON:0002346!2.67e-31!90;UBERON:0000033!7.57e-29!123;UBERON:0004121!1.22e-28!169;UBERON:0000924!8.44e-28!173;UBERON:0006601!8.44e-28!173;UBERON:0000153!3.48e-27!129;UBERON:0007811!3.48e-27!129;UBERON:0007023!3.91e-27!115;UBERON:0000200!8.06e-27!6;UBERON:0001871!7.83e-26!7;UBERON:0002021!2.33e-23!5;UBERON:0001872!5.97e-23!5;UBERON:0000349!1.08e-20!5;UBERON:0002771!4.12e-14!3;UBERON:0000025!4.29e-10!194;UBERON:0001870!4.75e-10!2;UBERON:0001954!2.72e-09!2;UBERON:0003022!2.72e-09!2;UBERON:0002421!2.72e-09!2;UBERON:0002600!2.72e-09!2;UBERON:0001876!3.22e-09!2;UBERON:0000064!4.30e-09!219;UBERON:0004111!5.67e-07!241 | |ontology_enrichment_uberon=UBERON:0002619!5.47e-89!22;UBERON:0001950!3.30e-81!20;UBERON:0000956!4.32e-78!25;UBERON:0000203!4.32e-78!25;UBERON:0001869!2.72e-72!32;UBERON:0001893!8.02e-68!34;UBERON:0002020!2.17e-67!34;UBERON:0003528!2.17e-67!34;UBERON:0002791!5.58e-64!33;UBERON:0005743!2.23e-60!86;UBERON:0001017!4.20e-60!82;UBERON:0000073!3.59e-57!94;UBERON:0001016!3.59e-57!94;UBERON:0002780!1.58e-55!41;UBERON:0001890!1.58e-55!41;UBERON:0006240!1.58e-55!41;UBERON:0003080!4.24e-54!42;UBERON:0000955!2.81e-49!69;UBERON:0006238!2.81e-49!69;UBERON:0001049!2.30e-45!57;UBERON:0005068!2.30e-45!57;UBERON:0006241!2.30e-45!57;UBERON:0007135!2.30e-45!57;UBERON:0002616!1.22e-43!59;UBERON:0003056!7.99e-39!61;UBERON:0003075!4.78e-33!86;UBERON:0007284!4.78e-33!86;UBERON:0002346!2.67e-31!90;UBERON:0000033!7.57e-29!123;UBERON:0004121!1.22e-28!169;UBERON:0000924!8.44e-28!173;UBERON:0006601!8.44e-28!173;UBERON:0000153!3.48e-27!129;UBERON:0007811!3.48e-27!129;UBERON:0007023!3.91e-27!115;UBERON:0000200!8.06e-27!6;UBERON:0001871!7.83e-26!7;UBERON:0002021!2.33e-23!5;UBERON:0001872!5.97e-23!5;UBERON:0000349!1.08e-20!5;UBERON:0002771!4.12e-14!3;UBERON:0000025!4.29e-10!194;UBERON:0001870!4.75e-10!2;UBERON:0001954!2.72e-09!2;UBERON:0003022!2.72e-09!2;UBERON:0002421!2.72e-09!2;UBERON:0002600!2.72e-09!2;UBERON:0001876!3.22e-09!2;UBERON:0000064!4.30e-09!219;UBERON:0004111!5.67e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.28e-90;22!UBERON:0001950;1.15e-89;20!UBERON:0000956;1.04e-79;25!UBERON:0000203;1.04e-79;25!UBERON:0001869;5.41e-67;32!UBERON:0001893;2.45e-61;34!UBERON:0002791;7.98e-60;32!UBERON:0003528;1.04e-55;34!UBERON:0002020;1.04e-55;34!UBERON:0002780;4.28e-41;41!UBERON:0001890;4.28e-41;41!UBERON:0000200;1.07e-35;6!UBERON:0002021;3.64e-31;5!UBERON:0001872;1.88e-30;5!UBERON:0000073;1.78e-25;53!UBERON:0002616;1.78e-25;53!UBERON:0001017;9.56e-24;75!UBERON:0000955;4.52e-23;68!UBERON:0001870;1.19e-18;3!UBERON:0001016;2.72e-17;83!UBERON:0001871;9.78e-14;6!UBERON:0002702;3.90e-13;2!UBERON:0002771;7.34e-13;2!UBERON:0011216;4.50e-09;132!UBERON:0002114;1.59e-08;2!UBERON:0002902;1.02e-07;1!UBERON:0009899;1.02e-07;1!UBERON:0002581;1.54e-07;1!UBERON:0002022;2.09e-07;1!UBERON:0007190;2.09e-07;1!UBERON:0003112;3.96e-07;1!UBERON:0011158;3.96e-07;1!UBERON:0003128;3.96e-07;1!UBERON:0001703;3.96e-07;1!UBERON:0002241;3.96e-07;1!UBERON:0001882;5.34e-07;1!UBERON:0005403;5.34e-07;1!UBERON:0007023;9.19e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.28e-90;22!UBERON:0001950;1.15e-89;20!UBERON:0000956;1.04e-79;25!UBERON:0000203;1.04e-79;25!UBERON:0001869;5.41e-67;32!UBERON:0001893;2.45e-61;34!UBERON:0002791;7.98e-60;32!UBERON:0003528;1.04e-55;34!UBERON:0002020;1.04e-55;34!UBERON:0002780;4.28e-41;41!UBERON:0001890;4.28e-41;41!UBERON:0000200;1.07e-35;6!UBERON:0002021;3.64e-31;5!UBERON:0001872;1.88e-30;5!UBERON:0000073;1.78e-25;53!UBERON:0002616;1.78e-25;53!UBERON:0001017;9.56e-24;75!UBERON:0000955;4.52e-23;68!UBERON:0001870;1.19e-18;3!UBERON:0001016;2.72e-17;83!UBERON:0001871;9.78e-14;6!UBERON:0002702;3.90e-13;2!UBERON:0002771;7.34e-13;2!UBERON:0011216;4.50e-09;132!UBERON:0002114;1.59e-08;2!UBERON:0002902;1.02e-07;1!UBERON:0009899;1.02e-07;1!UBERON:0002581;1.54e-07;1!UBERON:0002022;2.09e-07;1!UBERON:0007190;2.09e-07;1!UBERON:0003112;3.96e-07;1!UBERON:0011158;3.96e-07;1!UBERON:0003128;3.96e-07;1!UBERON:0001703;3.96e-07;1!UBERON:0002241;3.96e-07;1!UBERON:0001882;5.34e-07;1!UBERON:0005403;5.34e-07;1!UBERON:0007023;9.19e-07;114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.22e-90,22;UBERON:0001950,1.09e-89,20;UBERON:0000956,1.00e-79,25;UBERON:0000203,1.00e-79,25;UBERON:0001869,5.80e-76,32;UBERON:0001893,2.25e-71,34;UBERON:0002791,1.15e-68,32;UBERON:0003528,1.67e-64,34;UBERON:0002020,1.67e-64,34;UBERON:0002780,9.42e-59,41;UBERON:0001890,9.42e-59,41;UBERON:0003080,9.42e-59,41;UBERON:0006240,9.42e-59,41;UBERON:0001017,4.44e-55,81;UBERON:0001016,3.67e-49,89;UBERON:0000955,1.13e-48,68;UBERON:0006238,1.13e-48,68;UBERON:0000073,1.01e-44,53;UBERON:0002616,1.01e-44,53;UBERON:0001049,3.90e-42,56;UBERON:0005068,3.90e-42,56;UBERON:0006241,3.90e-42,56;UBERON:0007135,3.90e-42,56;UBERON:0003056,2.21e-38,61;UBERON:0000200,8.18e-36,6;UBERON:0002021,4.12e-31,5;UBERON:0001872,1.48e-30,5;UBERON:0003075,1.50e-27,82;UBERON:0007284,1.50e-27,82;UBERON:0002346,4.45e-26,86;UBERON:0004121,2.14e-23,171;UBERON:0000924,2.14e-23,171;UBERON:0006601,2.14e-23,171;UBERON:0011216,3.70e-21,223;UBERON:0010371,7.60e-21,104;UBERON:0007023,1.08e-18,114;UBERON:0001870,1.09e-18,3;UBERON:0010314,3.02e-17,132;UBERON:0001871,9.62e-14,6;UBERON:0002702,3.67e-13,2;UBERON:0002771,6.32e-13,2;UBERON:0000025,2.50e-09,192;UBERON:0002114,1.69e-08,2;UBERON:0002902,9.91e-08,1;UBERON:0009899,9.91e-08,1;UBERON:0002581,1.44e-07,1;UBERON:0007190,2.09e-07,1;UBERON:0002022,2.52e-07,1;UBERON:0003112,4.34e-07,1;UBERON:0011158,4.34e-07,1;UBERON:0003128,4.34e-07,1;UBERON:0001703,4.34e-07,1;UBERON:0002241,4.34e-07,1;UBERON:0004761,4.34e-07,1;UBERON:0009617,4.34e-07,1;UBERON:0001882,5.19e-07,1;UBERON:0005403,5.19e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,7.8083912314573,0.773288812777695,2.68026024534958,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,5.81599647657131,10.575563190451,11.9768278800717,0,0,0,0,0,0,0,0,3.12524990879926,0,0,0,0,0,3.72955175161753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42752799424029,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,6.45770118749963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0,0,0,0,0,8.07969103551728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,8.41981227823546,8.13741049592249,0,0,0,4.98055085770431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94511275452442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,3.3399197050159,18.420554922326,9.09912996625762,8.2046545696302,14.8722300770814,18.6724581653388,5.32869630585109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.23958532344415,8.59185908475232,10.3343398250592,6.78549169074803,9.84554656232795,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,9.93168880799021,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.25521709756415,5.67255897442491,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,7.8083912314573,0.773288812777695,2.68026024534958,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,5.81599647657131,10.575563190451,11.9768278800717,0,0,0,0,0,0,0,0,3.12524990879926,0,0,0,0,0,3.72955175161753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42752799424029,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,6.45770118749963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.0896272488926,0,0,0,0,0,8.07969103551728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,8.41981227823546,8.13741049592249,0,0,0,4.98055085770431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94511275452442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,3.3399197050159,18.420554922326,9.09912996625762,8.2046545696302,14.8722300770814,18.6724581653388,5.32869630585109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.23958532344415,8.59185908475232,10.3343398250592,6.78549169074803,9.84554656232795,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,9.93168880799021,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.25521709756415,5.67255897442491,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@TBR1 | |short_description=p4@TBR1 | ||
}} | }} |
Latest revision as of 20:39, 17 September 2015
Short description: | p4@TBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TBR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 399bp_to_ENST00000463544_5end |
EntrezGene: | TBR1 |
HGNC: | 11590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.28e-07 | 8 |