Personal tools

FFCP PHASE1:Mm9::chr6:107479790..107479801,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16979
|EntrezGene=16979
|HGNC=
|HGNC=
|MCL_coexpression_id=237
|MCL_coexpression_id=237
|TSSclassifier=NA
|UniProt=Q61809
|UniProt=Q61809
|association_with_transcript=11bp_to_ENSMUST00000049285,uc009ddd.1_5end
|association_with_transcript=11bp_to_ENSMUST00000049285,uc009ddd.1_5end
|cluster_id=chr6:107479790..107479801,+
|description=CAGE_peak_2_at_Lrrn1_5end
|description=CAGE_peak_2_at_Lrrn1_5end
|id=chr6:107479790..107479801,+
|id=chr6:107479790..107479801,+
|ontology_enrichment_celltype=CL:0000540!1.81e-13!33;CL:0000047!1.81e-13!33;CL:0000031!1.81e-13!33;CL:0000404!1.81e-13!33;CL:0000117!3.47e-13!23;CL:0000337!3.47e-13!23;CL:0000221!4.08e-10!44;CL:0000133!4.08e-10!44;CL:0002319!5.99e-10!43;CL:0000393!2.94e-09!39;CL:0000211!2.94e-09!39
|ontology_enrichment_celltype=CL:0000540!1.81e-13!33;CL:0000047!1.81e-13!33;CL:0000031!1.81e-13!33;CL:0000404!1.81e-13!33;CL:0000117!3.47e-13!23;CL:0000337!3.47e-13!23;CL:0000221!4.08e-10!44;CL:0000133!4.08e-10!44;CL:0002319!5.99e-10!43;CL:0000393!2.94e-09!39;CL:0000211!2.94e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.40e-15,23;CL:0000337,5.40e-15,23;CL:0000540,2.79e-13,33;CL:0000047,2.79e-13,33;CL:0000031,2.79e-13,33;CL:0000404,2.79e-13,33;CL:0000393,5.46e-10,39;CL:0000211,5.46e-10,39;CL:0002319,2.39e-08,43;CL:0000221,5.46e-08,44;CL:0000133,5.46e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.46e-22!102;UBERON:0000924!2.46e-22!102;UBERON:0006601!2.46e-22!102;UBERON:0001017!9.73e-22!73;UBERON:0005743!9.73e-22!73;UBERON:0000073!3.66e-21!75;UBERON:0001016!3.66e-21!75;UBERON:0002346!1.82e-19!71;UBERON:0003075!1.82e-19!71;UBERON:0007284!1.82e-19!71;UBERON:0001049!5.92e-17!52;UBERON:0005068!5.92e-17!52;UBERON:0006241!5.92e-17!52;UBERON:0007135!5.92e-17!52;UBERON:0000033!1.81e-16!63;UBERON:0000955!1.63e-15!50;UBERON:0006238!1.63e-15!50;UBERON:0002616!5.71e-15!49;UBERON:0003056!7.60e-13!49;UBERON:0002020!4.11e-12!34;UBERON:0003080!5.59e-11!40;UBERON:0002780!1.92e-10!39;UBERON:0001890!1.92e-10!39;UBERON:0006240!1.92e-10!39;UBERON:0000153!4.15e-10!94;UBERON:0002791!5.56e-09!29;UBERON:0003528!5.56e-09!29;UBERON:0001893!5.56e-09!29;UBERON:0007811!5.90e-08!86;UBERON:0003076!3.28e-07!12;UBERON:0003057!3.28e-07!12
|ontology_enrichment_uberon=UBERON:0004121!2.46e-22!102;UBERON:0000924!2.46e-22!102;UBERON:0006601!2.46e-22!102;UBERON:0001017!9.73e-22!73;UBERON:0005743!9.73e-22!73;UBERON:0000073!3.66e-21!75;UBERON:0001016!3.66e-21!75;UBERON:0002346!1.82e-19!71;UBERON:0003075!1.82e-19!71;UBERON:0007284!1.82e-19!71;UBERON:0001049!5.92e-17!52;UBERON:0005068!5.92e-17!52;UBERON:0006241!5.92e-17!52;UBERON:0007135!5.92e-17!52;UBERON:0000033!1.81e-16!63;UBERON:0000955!1.63e-15!50;UBERON:0006238!1.63e-15!50;UBERON:0002616!5.71e-15!49;UBERON:0003056!7.60e-13!49;UBERON:0002020!4.11e-12!34;UBERON:0003080!5.59e-11!40;UBERON:0002780!1.92e-10!39;UBERON:0001890!1.92e-10!39;UBERON:0006240!1.92e-10!39;UBERON:0000153!4.15e-10!94;UBERON:0002791!5.56e-09!29;UBERON:0003528!5.56e-09!29;UBERON:0001893!5.56e-09!29;UBERON:0007811!5.90e-08!86;UBERON:0003076!3.28e-07!12;UBERON:0003057!3.28e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.42e-20,73;UBERON:0000073,4.52e-20,54;UBERON:0001016,1.37e-19,75;UBERON:0001049,2.96e-18,52;UBERON:0005068,2.96e-18,52;UBERON:0006241,2.96e-18,52;UBERON:0007135,2.96e-18,52;UBERON:0002346,6.82e-17,64;UBERON:0003075,6.82e-17,64;UBERON:0007284,6.82e-17,64;UBERON:0002020,3.09e-16,34;UBERON:0004121,4.70e-16,95;UBERON:0000924,4.70e-16,95;UBERON:0006601,4.70e-16,95;UBERON:0010371,4.33e-14,73;UBERON:0000955,9.14e-14,47;UBERON:0006238,9.14e-14,47;UBERON:0002616,4.35e-13,46;UBERON:0003528,8.88e-12,29;UBERON:0002791,8.88e-12,29;UBERON:0001893,8.88e-12,29;UBERON:0003080,8.19e-11,40;UBERON:0003056,2.51e-10,49;UBERON:0002780,3.93e-10,39;UBERON:0001890,3.93e-10,39;UBERON:0006240,3.93e-10,39;UBERON:0003076,4.12e-09,12;UBERON:0003057,4.12e-09,12;UBERON:0010314,7.84e-09,92;UBERON:0002240,1.64e-07,6;UBERON:0005174,1.64e-07,6;UBERON:0001137,1.64e-07,6;UBERON:0002619,4.02e-07,17;UBERON:0000956,4.99e-07,21;UBERON:0001869,4.99e-07,21;UBERON:0000203,4.99e-07,21
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,0.528990979272033,3.80298842103708,0,0,0,0,0,0.299600110518405,0.384218305321555,0.933206510776299,1.35005938331691,0.420649922702764,2.57085885963423,3.75476519617743,2.81728838194394,1.53352753629178,1.83843757322004,3.30347642998166,3.95830748064082,3.84016333140609,1.05509030184155,1.00636407962651,2.6045668527838,7.2587579740359,3.93933827022176,2.75036845998258,2.94628585473668,4.27115042397309,3.16879057903011,0,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.593768556259299,1.04091196059682,0.913396434936424,0.230615497256059,0,0.117588707135705,1.0053327306374,0,0.144599356919912,0,2.10296904931632,0,0,0,2.63502717310392,3.56059401582874,0,0,0,0,2.54644086988199,1.37250180845588,1.25654352112864,2.08589184230732,2.30143911597297,2.28566849015516,4.38051410282946,0.305518091550949,0.124406970610093,0,0.420883711772948,0.390361328888111,1.14951052216736,1.62055916824814,1.05493372485001,1.49680298132921,0.512454881139399,0.749613796477831,0.517406741478031,1.72454394346274,2.83659120251729,2.28736461413134,2.41115305670332,1.39023624612799,2.089512999133,0.61734640922383,1.19420560091096,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,2.73376933133365,1.13195073617213,0,0,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0.658795818896044,0,0.994782360205754,0.58489226135736,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,4.49541651965817,10.3146284201139,0,0.504941854408746,0.315508219416257,0.390438744296638,1.29254038639679,0,1.11399337041197,1.41538265394416,1.61924280669958,0.292255857911312,1.18586333383957,2.24924921495265,2.6968616189571,0.712262414669021,0.977321756121456,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0.428674070063185,0,0.713475270408282,1.81003922662333,0.304464949114599,0,0,0,0.8244312647074,1.77610869365496,0.904693873922338,0.477489376012546,0.328281799490123,0,5.93360966433631,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.496375471371293,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0.501572104035363,2.25900737046827,1.84130094602871,3.43737308063638,2.92150409984269,0,2.2661816921691,1.35004500046361,1.80128481289688,0,1.55328093525546,1.14166082342594,2.79317411380722,1.70733605754134,2.43106717068294,1.67690530102386,1.47074806760011,1.33348036680969,1.23621034343337,1.60459604795908,1.51618327058278,1.52087579934144,1.50901073108861,1.591905626988,1.02440243847791,1.49332219284595,2.85776214769844,2.54945517078682,1.54327376370964,0.824171801606613,1.32479028120958,1.37147700954166,1.24233064311536,1.1921809497366,1.74415699958794,1.88218760830661,1.26921911837515,0.914639864363863,1.57841826862706,1.62964936615034,5.05028044491965,1.30498519936592,1.67457620038458,0,1.39443157067369,0.964533054905707,1.49886346762768,1.40358965067245,0.644613162144895,3.25190164517034,1.76473135295612,1.39120701372253
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,4.24864567805155,0.528990979272033,3.80298842103708,0,0,0,0,0,0.299600110518405,0.384218305321555,0.933206510776299,1.35005938331691,0.420649922702764,2.57085885963423,3.75476519617743,2.81728838194394,1.53352753629178,1.83843757322004,3.30347642998166,3.95830748064082,3.84016333140609,1.05509030184155,1.00636407962651,2.6045668527838,7.2587579740359,3.93933827022176,2.75036845998258,2.94628585473668,4.27115042397309,3.16879057903011,0,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0.593768556259299,1.04091196059682,0.913396434936424,0.230615497256059,0,0.117588707135705,1.0053327306374,0,0.144599356919912,0,2.10296904931632,0,0,0,2.63502717310392,3.56059401582874,0,0,0,0,2.54644086988199,1.37250180845588,1.25654352112864,2.08589184230732,2.30143911597297,2.28566849015516,4.38051410282946,0.305518091550949,0.124406970610093,0,0.420883711772948,0.390361328888111,1.14951052216736,1.62055916824814,1.05493372485001,1.49680298132921,0.512454881139399,0.749613796477831,0.517406741478031,1.72454394346274,2.83659120251729,2.28736461413134,2.41115305670332,1.39023624612799,2.089512999133,0.61734640922383,1.19420560091096,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,2.73376933133365,1.13195073617213,0,0,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0.658795818896044,0,0.994782360205754,0.58489226135736,0,0,0,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,4.49541651965817,10.3146284201139,0,0.504941854408746,0.315508219416257,0.390438744296638,1.29254038639679,0,1.11399337041197,1.41538265394416,1.61924280669958,0.292255857911312,1.18586333383957,2.24924921495265,2.6968616189571,0.712262414669021,0.977321756121456,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0.428674070063185,0,0.713475270408282,1.81003922662333,0.304464949114599,0,0,0,0.8244312647074,1.77610869365496,0.904693873922338,0.477489376012546,0.328281799490123,0,5.93360966433631,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.496375471371293,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0.501572104035363,2.25900737046827,1.84130094602871,3.43737308063638,2.92150409984269,0,2.2661816921691,1.35004500046361,1.80128481289688,0,1.55328093525546,1.14166082342594,2.79317411380722,1.70733605754134,2.43106717068294,1.67690530102386,1.47074806760011,1.33348036680969,1.23621034343337,1.60459604795908,1.51618327058278,1.52087579934144,1.50901073108861,1.591905626988,1.02440243847791,1.49332219284595,2.85776214769844,2.54945517078682,1.54327376370964,0.824171801606613,1.32479028120958,1.37147700954166,1.24233064311536,1.1921809497366,1.74415699958794,1.88218760830661,1.26921911837515,0.914639864363863,1.57841826862706,1.62964936615034,5.05028044491965,1.30498519936592,1.67457620038458,0,1.39443157067369,0.964533054905707,1.49886346762768,1.40358965067245,0.644613162144895,3.25190164517034,1.76473135295612,1.39120701372253
|short_description=p2@Lrrn1
|short_description=p2@Lrrn1
}}
}}

Latest revision as of 10:39, 26 September 2015

Short description:p2@Lrrn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrrn1_5end
Coexpression cluster:MCL_coexpression_mm9:237
Association with transcript: 11bp_to_ENSMUST00000049285, uc009ddd.1_5end
EntrezGene:Lrrn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrrn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A310.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.40e-1523
neuroblast (sensu Vertebrata)5.40e-1523
neuron2.79e-1333
neuronal stem cell2.79e-1333
neuroblast2.79e-1333
electrically signaling cell2.79e-1333
electrically responsive cell5.46e-1039
electrically active cell5.46e-1039
neural cell2.39e-0843
ectodermal cell5.46e-0844
neurectodermal cell5.46e-0844

Uber anatomy
Ontology termp-valuen
central nervous system1.42e-2073
regional part of nervous system4.52e-2054
nervous system1.37e-1975
neural tube2.96e-1852
neural rod2.96e-1852
future spinal cord2.96e-1852
neural keel2.96e-1852
neurectoderm6.82e-1764
neural plate6.82e-1764
presumptive neural plate6.82e-1764
gray matter3.09e-1634
ectoderm-derived structure4.70e-1695
ectoderm4.70e-1695
presumptive ectoderm4.70e-1695
ecto-epithelium4.33e-1473
brain9.14e-1447
future brain9.14e-1447
regional part of brain4.35e-1346
brain grey matter8.88e-1229
regional part of telencephalon8.88e-1229
telencephalon8.88e-1229
anterior neural tube8.19e-1140
pre-chordal neural plate2.51e-1049
regional part of forebrain3.93e-1039
forebrain3.93e-1039
future forebrain3.93e-1039
posterior neural tube4.12e-0912
chordal neural plate4.12e-0912
structure with developmental contribution from neural crest7.84e-0992
spinal cord1.64e-076
dorsal region element1.64e-076
dorsum1.64e-076
regional part of cerebral cortex4.02e-0717
cerebral cortex4.99e-0721
cerebral hemisphere4.99e-0721
pallium4.99e-0721
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:107479790..107479801,%2B&oldid=4249018"