FFCP PHASE1:Mm9::chr18:23468548..23468640,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13527 | |EntrezGene=13527 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UHP1 | |UniProt=Q3UHP1 | ||
|association_with_transcript=0bp_to_uc008efs.1,uc008eft.1_5end | |association_with_transcript=0bp_to_uc008efs.1,uc008eft.1_5end | ||
|cluster_id=chr18:23468548..23468640,+ | |||
|description=CAGE_peak_2_at_Dtna_5end | |description=CAGE_peak_2_at_Dtna_5end | ||
|id=chr18:23468548..23468640,+ | |id=chr18:23468548..23468640,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.20e-14!33;CL:0000047!1.20e-14!33;CL:0000031!1.20e-14!33;CL:0000404!1.20e-14!33;CL:0000117!8.11e-11!23;CL:0000337!8.11e-11!23;CL:0000221!8.26e-11!44;CL:0000133!8.26e-11!44;CL:0002319!8.28e-11!43;CL:0000393!1.33e-09!39;CL:0000211!1.33e-09!39;CL:0000055!7.57e-07!50 | |ontology_enrichment_celltype=CL:0000540!1.20e-14!33;CL:0000047!1.20e-14!33;CL:0000031!1.20e-14!33;CL:0000404!1.20e-14!33;CL:0000117!8.11e-11!23;CL:0000337!8.11e-11!23;CL:0000221!8.26e-11!44;CL:0000133!8.26e-11!44;CL:0002319!8.28e-11!43;CL:0000393!1.33e-09!39;CL:0000211!1.33e-09!39;CL:0000055!7.57e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.10e-16,33;CL:0000047,1.10e-16,33;CL:0000031,1.10e-16,33;CL:0000404,1.10e-16,33;CL:0000117,8.32e-13,23;CL:0000337,8.32e-13,23;CL:0000393,4.11e-12,39;CL:0000211,4.11e-12,39;CL:0000221,6.18e-12,44;CL:0000133,6.18e-12,44;CL:0002319,6.32e-12,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.68e-27!102;UBERON:0000924!5.68e-27!102;UBERON:0006601!5.68e-27!102;UBERON:0000073!6.21e-27!75;UBERON:0001016!6.21e-27!75;UBERON:0001017!1.62e-26!73;UBERON:0005743!1.62e-26!73;UBERON:0002346!2.22e-24!71;UBERON:0003075!2.22e-24!71;UBERON:0007284!2.22e-24!71;UBERON:0000033!1.26e-19!63;UBERON:0001049!5.44e-19!52;UBERON:0005068!5.44e-19!52;UBERON:0006241!5.44e-19!52;UBERON:0007135!5.44e-19!52;UBERON:0000955!5.38e-18!50;UBERON:0006238!5.38e-18!50;UBERON:0002616!2.27e-17!49;UBERON:0003056!4.05e-17!49;UBERON:0002020!2.63e-15!34;UBERON:0003080!1.71e-14!40;UBERON:0002780!8.46e-14!39;UBERON:0001890!8.46e-14!39;UBERON:0006240!8.46e-14!39;UBERON:0002791!1.38e-12!29;UBERON:0003528!1.38e-12!29;UBERON:0001893!1.38e-12!29;UBERON:0000956!1.96e-08!21;UBERON:0001869!1.96e-08!21;UBERON:0000203!1.96e-08!21;UBERON:0002021!7.57e-08!10;UBERON:0000411!7.57e-08!10;UBERON:0001950!7.57e-08!10;UBERON:0007811!1.26e-07!86;UBERON:0000468!1.54e-07!333;UBERON:0002619!1.89e-07!17 | |ontology_enrichment_uberon=UBERON:0004121!5.68e-27!102;UBERON:0000924!5.68e-27!102;UBERON:0006601!5.68e-27!102;UBERON:0000073!6.21e-27!75;UBERON:0001016!6.21e-27!75;UBERON:0001017!1.62e-26!73;UBERON:0005743!1.62e-26!73;UBERON:0002346!2.22e-24!71;UBERON:0003075!2.22e-24!71;UBERON:0007284!2.22e-24!71;UBERON:0000033!1.26e-19!63;UBERON:0001049!5.44e-19!52;UBERON:0005068!5.44e-19!52;UBERON:0006241!5.44e-19!52;UBERON:0007135!5.44e-19!52;UBERON:0000955!5.38e-18!50;UBERON:0006238!5.38e-18!50;UBERON:0002616!2.27e-17!49;UBERON:0003056!4.05e-17!49;UBERON:0002020!2.63e-15!34;UBERON:0003080!1.71e-14!40;UBERON:0002780!8.46e-14!39;UBERON:0001890!8.46e-14!39;UBERON:0006240!8.46e-14!39;UBERON:0002791!1.38e-12!29;UBERON:0003528!1.38e-12!29;UBERON:0001893!1.38e-12!29;UBERON:0000956!1.96e-08!21;UBERON:0001869!1.96e-08!21;UBERON:0000203!1.96e-08!21;UBERON:0002021!7.57e-08!10;UBERON:0000411!7.57e-08!10;UBERON:0001950!7.57e-08!10;UBERON:0007811!1.26e-07!86;UBERON:0000468!1.54e-07!333;UBERON:0002619!1.89e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.00e-29,75;UBERON:0001017,9.77e-29,73;UBERON:0004121,1.86e-26,95;UBERON:0000924,1.86e-26,95;UBERON:0006601,1.86e-26,95;UBERON:0002346,3.49e-26,64;UBERON:0003075,3.49e-26,64;UBERON:0007284,3.49e-26,64;UBERON:0000073,1.16e-22,54;UBERON:0001049,3.42e-21,52;UBERON:0005068,3.42e-21,52;UBERON:0006241,3.42e-21,52;UBERON:0007135,3.42e-21,52;UBERON:0010371,1.17e-20,73;UBERON:0003056,1.98e-18,49;UBERON:0002020,4.28e-18,34;UBERON:0000955,9.40e-18,47;UBERON:0006238,9.40e-18,47;UBERON:0002616,4.94e-17,46;UBERON:0010314,8.54e-16,92;UBERON:0003080,2.95e-15,40;UBERON:0003528,8.59e-15,29;UBERON:0002791,8.59e-15,29;UBERON:0001893,8.59e-15,29;UBERON:0002780,1.90e-14,39;UBERON:0001890,1.90e-14,39;UBERON:0006240,1.90e-14,39;UBERON:0000956,9.14e-10,21;UBERON:0001869,9.14e-10,21;UBERON:0000203,9.14e-10,21;UBERON:0002021,3.35e-09,10;UBERON:0000411,3.35e-09,10;UBERON:0001950,3.35e-09,10;UBERON:0002619,1.45e-08,17 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,11.7359740408476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,17.3992156339254,21.1596391708813,20.2826049121977,0,0,0,0,0,0.898800331555214,1.15265491596466,3.62913643079672,5.40023753326763,3.78584930432488,15.996455126613,19.8781686856452,4.28717797252339,4.98396449294829,3.67687514644008,61.6648933596577,43.2860076108786,48.2324514424605,13.7161739239402,18.9379422256988,13.5437476344758,34.0603258781685,39.3933827022176,40.9499304041851,41.8372591372608,44.8470794517174,26.8415201988433,1.59025005999687,7.70829913089212,0,0,0,0,0,0,2.10666630197628,0,0,0,1.12674735821344,0,0,0,0,0,0,1.37020655662872,0,2.67195850316685,2.4287945747259,5.48037860961854,3.68984795609694,6.63179618431539,9.05433044944927,0.628332956648377,0.247194967734374,0.433798070759735,0,0.485300549842228,0,0.484875253135222,1.86391761218122,101.887717360018,95.9265917205624,0,0,0,0,83.7329674272959,61.3050807776959,19.2251158732683,62.0552823086427,51.9102378380571,68.3622666600953,59.8670260720026,0.407357455401265,0,0.252722758433675,4.62972082950243,2.73252930221678,4.13823787980251,4.32149111532838,8.13806016312861,7.00775941258677,11.6583485459213,9.55757590509234,20.1788629176432,0,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0,0.411564272815887,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0.697601834251224,0,0.233530684734339,0,0.32833492815819,0.405344047729279,0.438599962275997,0,0.536825675041487,42.0579897128254,17.0821656549612,0,0,0.853153002140936,1.62565670302307,3.09281907173024,2.21851877085677,2.2237804384487,1.90225626112559,0,1.15289268306808,0.502670417600539,1.59165177632921,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,1.5994791765362,0,0.407302655690628,0.387904974335251,0.841629838683823,0.316182685621286,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.651859905768103,0,0.469380496577004,0.670025029767263,0.714130922658041,1.95133647857799,1.26108115284953,1.10732344824387,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,74.0138219843721,61.4189237743145,0,0.504941854408746,6.94118082715765,9.37052986311932,14.8642144435631,17.4447222505363,30.0778210011232,31.7045714483492,8.09621403349789,16.6585839009448,16.9973744517005,51.4114106274891,0.141940085208269,0.712262414669021,0.977321756121456,0.164970122972535,0,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,1.22974059177571,0,0,0.356497378384721,0.632073515871632,0,0,0.680879211507576,1.26042765821917,0.905510786479282,0.643011105094777,3.54680467284547,4.28085162244969,4.60737257685939,2.74018454203139,0,0.21183207086382,0.661585194164886,0.16488625294148,0.807322133479528,0.0603129249281559,0.477489376012546,0,0.582961673259701,69.9053388579621,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,2.48412283890143,2.29997125615916,2.62035076495413,0.674321731924103,1.32245529160537,1.04702376793612,0.518459893167171,0,0,5.23307911153926,4.63283773279873,5.44463327363333,5.94135187997563,5.91346439217724,8.33236394384853,8.59348939970071,13.3171367420653,2.89900944991207,1.15212002503146,0,0,0,0.389762468933385,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.187682475451182,0,0.214368379079066,0,74.5472432254528,52.4770769618182,62.4456109648942,54.477458802949,58.9170967002752,60.431511791176,44.5514850152992,57.6411140127002,59.814797985915,51.776031175182,0.62272408550506,3.99024873401031,4.78054096111576,4.86213434136588,4.82110274044359,4.96377472815038,9.11211583986622,8.24140228955577,9.30665707816264,11.1186773176071,10.6461305953901,8.67681170375951,7.86588662747012,8.9635213366817,7.46661096422972,4.76293691283074,7.64836551236046,8.10218725947561,6.59337441285291,8.09594060739185,6.51451579532289,7.63145966485151,8.10683045820891,7.1219744149841,8.09340671571843,8.71530461284268,8.96347067076586,5.5244639401947,9.2346797415186,8.97827634652382,9.6094364680581,7.19082721341613,6.13846564754534,7.90177890048427,5.5942917184531,9.99242311751784,7.25187986180766,7.95022899978704,3.44318997723918,2.20591419119516,2.78241402744506 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|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,11.7359740408476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,17.3992156339254,21.1596391708813,20.2826049121977,0,0,0,0,0,0.898800331555214,1.15265491596466,3.62913643079672,5.40023753326763,3.78584930432488,15.996455126613,19.8781686856452,4.28717797252339,4.98396449294829,3.67687514644008,61.6648933596577,43.2860076108786,48.2324514424605,13.7161739239402,18.9379422256988,13.5437476344758,34.0603258781685,39.3933827022176,40.9499304041851,41.8372591372608,44.8470794517174,26.8415201988433,1.59025005999687,7.70829913089212,0,0,0,0,0,0,2.10666630197628,0,0,0,1.12674735821344,0,0,0,0,0,0,1.37020655662872,0,2.67195850316685,2.4287945747259,5.48037860961854,3.68984795609694,6.63179618431539,9.05433044944927,0.628332956648377,0.247194967734374,0.433798070759735,0,0.485300549842228,0,0.484875253135222,1.86391761218122,101.887717360018,95.9265917205624,0,0,0,0,83.7329674272959,61.3050807776959,19.2251158732683,62.0552823086427,51.9102378380571,68.3622666600953,59.8670260720026,0.407357455401265,0,0.252722758433675,4.62972082950243,2.73252930221678,4.13823787980251,4.32149111532838,8.13806016312861,7.00775941258677,11.6583485459213,9.55757590509234,20.1788629176432,0,0.189106080167819,0.351902248327898,0.219195732427575,0.278047249225598,0,0.411564272815887,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.473489471170421,0.196764231747404,0.154267112887378,0.697601834251224,0,0.233530684734339,0,0.32833492815819,0.405344047729279,0.438599962275997,0,0.536825675041487,42.0579897128254,17.0821656549612,0,0,0.853153002140936,1.62565670302307,3.09281907173024,2.21851877085677,2.2237804384487,1.90225626112559,0,1.15289268306808,0.502670417600539,1.59165177632921,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,1.5994791765362,0,0.407302655690628,0.387904974335251,0.841629838683823,0.316182685621286,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.651859905768103,0,0.469380496577004,0.670025029767263,0.714130922658041,1.95133647857799,1.26108115284953,1.10732344824387,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0,0,0,74.0138219843721,61.4189237743145,0,0.504941854408746,6.94118082715765,9.37052986311932,14.8642144435631,17.4447222505363,30.0778210011232,31.7045714483492,8.09621403349789,16.6585839009448,16.9973744517005,51.4114106274891,0.141940085208269,0.712262414669021,0.977321756121456,0.164970122972535,0,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,1.22974059177571,0,0,0.356497378384721,0.632073515871632,0,0,0.680879211507576,1.26042765821917,0.905510786479282,0.643011105094777,3.54680467284547,4.28085162244969,4.60737257685939,2.74018454203139,0,0.21183207086382,0.661585194164886,0.16488625294148,0.807322133479528,0.0603129249281559,0.477489376012546,0,0.582961673259701,69.9053388579621,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,2.48412283890143,2.29997125615916,2.62035076495413,0.674321731924103,1.32245529160537,1.04702376793612,0.518459893167171,0,0,5.23307911153926,4.63283773279873,5.44463327363333,5.94135187997563,5.91346439217724,8.33236394384853,8.59348939970071,13.3171367420653,2.89900944991207,1.15212002503146,0,0,0,0.389762468933385,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0.579568782096571,0.187682475451182,0,0.214368379079066,0,74.5472432254528,52.4770769618182,62.4456109648942,54.477458802949,58.9170967002752,60.431511791176,44.5514850152992,57.6411140127002,59.814797985915,51.776031175182,0.62272408550506,3.99024873401031,4.78054096111576,4.86213434136588,4.82110274044359,4.96377472815038,9.11211583986622,8.24140228955577,9.30665707816264,11.1186773176071,10.6461305953901,8.67681170375951,7.86588662747012,8.9635213366817,7.46661096422972,4.76293691283074,7.64836551236046,8.10218725947561,6.59337441285291,8.09594060739185,6.51451579532289,7.63145966485151,8.10683045820891,7.1219744149841,8.09340671571843,8.71530461284268,8.96347067076586,5.5244639401947,9.2346797415186,8.97827634652382,9.6094364680581,7.19082721341613,6.13846564754534,7.90177890048427,5.5942917184531,9.99242311751784,7.25187986180766,7.95022899978704,3.44318997723918,2.20591419119516,2.78241402744506 | ||
|short_description=p2@Dtna | |short_description=p2@Dtna | ||
}} | }} |
Latest revision as of 02:38, 27 September 2015
Short description: | p2@Dtna |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dtna_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_uc008efs.1, uc008eft.1_5end |
EntrezGene: | Dtna |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.10e-16 | 33 |
neuronal stem cell | 1.10e-16 | 33 |
neuroblast | 1.10e-16 | 33 |
electrically signaling cell | 1.10e-16 | 33 |
CNS neuron (sensu Vertebrata) | 8.32e-13 | 23 |
neuroblast (sensu Vertebrata) | 8.32e-13 | 23 |
electrically responsive cell | 4.11e-12 | 39 |
electrically active cell | 4.11e-12 | 39 |
ectodermal cell | 6.18e-12 | 44 |
neurectodermal cell | 6.18e-12 | 44 |
neural cell | 6.32e-12 | 43 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.00e-29 | 75 |
central nervous system | 9.77e-29 | 73 |
ectoderm-derived structure | 1.86e-26 | 95 |
ectoderm | 1.86e-26 | 95 |
presumptive ectoderm | 1.86e-26 | 95 |
neurectoderm | 3.49e-26 | 64 |
neural plate | 3.49e-26 | 64 |
presumptive neural plate | 3.49e-26 | 64 |
regional part of nervous system | 1.16e-22 | 54 |
neural tube | 3.42e-21 | 52 |
neural rod | 3.42e-21 | 52 |
future spinal cord | 3.42e-21 | 52 |
neural keel | 3.42e-21 | 52 |
ecto-epithelium | 1.17e-20 | 73 |
pre-chordal neural plate | 1.98e-18 | 49 |
gray matter | 4.28e-18 | 34 |
brain | 9.40e-18 | 47 |
future brain | 9.40e-18 | 47 |
regional part of brain | 4.94e-17 | 46 |
structure with developmental contribution from neural crest | 8.54e-16 | 92 |
anterior neural tube | 2.95e-15 | 40 |
brain grey matter | 8.59e-15 | 29 |
regional part of telencephalon | 8.59e-15 | 29 |
telencephalon | 8.59e-15 | 29 |
regional part of forebrain | 1.90e-14 | 39 |
forebrain | 1.90e-14 | 39 |
future forebrain | 1.90e-14 | 39 |
cerebral cortex | 9.14e-10 | 21 |
cerebral hemisphere | 9.14e-10 | 21 |
pallium | 9.14e-10 | 21 |
occipital lobe | 3.35e-09 | 10 |
visual cortex | 3.35e-09 | 10 |
neocortex | 3.35e-09 | 10 |
regional part of cerebral cortex | 1.45e-08 | 17 |