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FFCP PHASE1:Mm9::chr4:140609619..140609639,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230872
|EntrezGene=230872
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q8CJ40
|UniProt=Q8CJ40
|association_with_transcript=0bp_to_ENSMUST00000102491_5end
|association_with_transcript=0bp_to_ENSMUST00000102491_5end
|cluster_id=chr4:140609619..140609639,-
|description=CAGE_peak_3_at_Crocc_5end
|description=CAGE_peak_3_at_Crocc_5end
|id=chr4:140609619..140609639,-
|id=chr4:140609619..140609639,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.99e-26!63;UBERON:0003056!1.85e-24!49;UBERON:0000955!9.65e-22!50;UBERON:0006238!9.65e-22!50;UBERON:0002616!5.68e-21!49;UBERON:0003080!6.21e-19!40;UBERON:0001049!1.31e-18!52;UBERON:0005068!1.31e-18!52;UBERON:0006241!1.31e-18!52;UBERON:0007135!1.31e-18!52;UBERON:0002780!3.39e-18!39;UBERON:0001890!3.39e-18!39;UBERON:0006240!3.39e-18!39;UBERON:0002346!4.78e-18!71;UBERON:0003075!4.78e-18!71;UBERON:0007284!4.78e-18!71;UBERON:0001017!1.26e-15!73;UBERON:0005743!1.26e-15!73;UBERON:0000073!1.23e-14!75;UBERON:0001016!1.23e-14!75;UBERON:0004121!2.08e-13!102;UBERON:0000924!2.08e-13!102;UBERON:0006601!2.08e-13!102;UBERON:0002791!2.64e-13!29;UBERON:0003528!2.64e-13!29;UBERON:0001893!2.64e-13!29;UBERON:0007811!7.92e-13!86;UBERON:0002020!4.97e-12!34;UBERON:0000956!1.25e-10!21;UBERON:0001869!1.25e-10!21;UBERON:0000203!1.25e-10!21;UBERON:0000153!2.00e-10!94;UBERON:0002619!1.23e-09!17;UBERON:0002021!1.26e-09!10;UBERON:0000411!1.26e-09!10;UBERON:0001950!1.26e-09!10;UBERON:0001008!3.69e-09!17;UBERON:0006554!3.74e-09!16;UBERON:0002113!1.24e-08!14;UBERON:0003918!1.24e-08!14;UBERON:0005095!1.24e-08!14;UBERON:0007687!1.24e-08!14;UBERON:0000489!4.06e-08!21;UBERON:0003103!4.58e-08!43;UBERON:0004111!1.21e-07!122;UBERON:0000025!7.32e-07!114
|ontology_enrichment_uberon=UBERON:0000033!3.99e-26!63;UBERON:0003056!1.85e-24!49;UBERON:0000955!9.65e-22!50;UBERON:0006238!9.65e-22!50;UBERON:0002616!5.68e-21!49;UBERON:0003080!6.21e-19!40;UBERON:0001049!1.31e-18!52;UBERON:0005068!1.31e-18!52;UBERON:0006241!1.31e-18!52;UBERON:0007135!1.31e-18!52;UBERON:0002780!3.39e-18!39;UBERON:0001890!3.39e-18!39;UBERON:0006240!3.39e-18!39;UBERON:0002346!4.78e-18!71;UBERON:0003075!4.78e-18!71;UBERON:0007284!4.78e-18!71;UBERON:0001017!1.26e-15!73;UBERON:0005743!1.26e-15!73;UBERON:0000073!1.23e-14!75;UBERON:0001016!1.23e-14!75;UBERON:0004121!2.08e-13!102;UBERON:0000924!2.08e-13!102;UBERON:0006601!2.08e-13!102;UBERON:0002791!2.64e-13!29;UBERON:0003528!2.64e-13!29;UBERON:0001893!2.64e-13!29;UBERON:0007811!7.92e-13!86;UBERON:0002020!4.97e-12!34;UBERON:0000956!1.25e-10!21;UBERON:0001869!1.25e-10!21;UBERON:0000203!1.25e-10!21;UBERON:0000153!2.00e-10!94;UBERON:0002619!1.23e-09!17;UBERON:0002021!1.26e-09!10;UBERON:0000411!1.26e-09!10;UBERON:0001950!1.26e-09!10;UBERON:0001008!3.69e-09!17;UBERON:0006554!3.74e-09!16;UBERON:0002113!1.24e-08!14;UBERON:0003918!1.24e-08!14;UBERON:0005095!1.24e-08!14;UBERON:0007687!1.24e-08!14;UBERON:0000489!4.06e-08!21;UBERON:0003103!4.58e-08!43;UBERON:0004111!1.21e-07!122;UBERON:0000025!7.32e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0003056,9.02e-25,49;UBERON:0002021,2.15e-21,10;UBERON:0000411,2.15e-21,10;UBERON:0001950,2.15e-21,10;UBERON:0002346,3.31e-20,64;UBERON:0003075,3.31e-20,64;UBERON:0007284,3.31e-20,64;UBERON:0000955,5.68e-20,47;UBERON:0006238,5.68e-20,47;UBERON:0002616,1.35e-18,46;UBERON:0003080,1.35e-18,40;UBERON:0000073,8.65e-18,54;UBERON:0002780,3.14e-17,39;UBERON:0001890,3.14e-17,39;UBERON:0006240,3.14e-17,39;UBERON:0010371,8.50e-17,73;UBERON:0001049,9.55e-16,52;UBERON:0005068,9.55e-16,52;UBERON:0006241,9.55e-16,52;UBERON:0007135,9.55e-16,52;UBERON:0003528,1.17e-15,29;UBERON:0002791,1.17e-15,29;UBERON:0001893,1.17e-15,29;UBERON:0004121,1.51e-15,95;UBERON:0000924,1.51e-15,95;UBERON:0006601,1.51e-15,95;UBERON:0002619,3.73e-14,17;UBERON:0001017,6.07e-14,73;UBERON:0001016,2.18e-13,75;UBERON:0000956,4.50e-13,21;UBERON:0001869,4.50e-13,21;UBERON:0000203,4.50e-13,21;UBERON:0010314,8.28e-13,92;UBERON:0002020,9.90e-13,34;UBERON:0002113,1.02e-11,14;UBERON:0003918,1.02e-11,14;UBERON:0011143,1.02e-11,14;UBERON:0005095,1.02e-11,14;UBERON:0007687,1.02e-11,14;UBERON:0006554,1.15e-08,18;UBERON:0001008,4.19e-08,19;UBERON:0000489,3.80e-07,21;UBERON:0000970,4.63e-07,9;UBERON:0000019,4.63e-07,9;UBERON:0000047,4.63e-07,9;UBERON:0010312,4.63e-07,9;UBERON:0004088,4.63e-07,9;UBERON:0002104,4.63e-07,9;UBERON:0001456,4.63e-07,9;UBERON:0003072,4.63e-07,9;UBERON:0004128,4.63e-07,9;UBERON:0003071,4.63e-07,9
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,1.92109152660777,0.207379224616955,0.405017814995072,0.210324961351382,0,0.220868540951614,0.122490799214954,0.479227355091182,0,1.10115880999389,1.0214987046815,0.921639199537461,0.527545150920775,0.548925861614458,0,0.279182999001381,2.25105044012672,1.68078072554491,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0.255457055208591,0,0,0,3.2953940669061,10.5225138648284,2.01046963380583,4.69325664519146,6.13717097592793,2.90903262383384,7.62533936418461,0.101839363850316,0.373220911830279,1.51633655060205,2.31486041475121,0.650602214813519,0.689706313300419,0.360124259610698,1.20563854268572,1.56483948048054,1.7935920839879,2.34254311399322,8.79591460512653,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.393528463494808,0,0.697601834251224,0.268273401399619,0.233530684734339,0.329119699826961,0.820837320395476,0.56748166682099,0.438599962275997,1.09775057645525,0.134206418760372,9.04246778825747,0.308713837137853,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.948339504765408,1.48523066392647,1.1270773567308,2.44381593414377,3.29719228184964,1.47285221769669,2.02356918797623,2.95220295959204,4.86696056308262,3.70191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.709700426041343,0.178065603667255,0.162886959353576,1.81467135269789,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,2.38307724027652,0.720244376125241,1.29358683782755,0.857348140126369,0.177340233642274,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.578574190077352,0.785267825952089,0.259229946583586,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0.965947970160952,0.187682475451182,0,0.214368379079066,0.501572104035363,11.2950368523413,5.52390283808612,11.4579102687879,13.0608418581203,7.53590771747707,6.0431511791176,14.1754725048679,5.40385443869065,7.70342095273148,12.4262474820437,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.384150914429216,0.34461281373368,0,0.115884325944855,0,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.188218760830661,0.25384382367503,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.394017929502254,0,0.309873682371932,0.578719832943424,0.249810577937946,0,0.644613162144895,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,1.92109152660777,0.207379224616955,0.405017814995072,0.210324961351382,0,0.220868540951614,0.122490799214954,0.479227355091182,0,1.10115880999389,1.0214987046815,0.921639199537461,0.527545150920775,0.548925861614458,0,0.279182999001381,2.25105044012672,1.68078072554491,0,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0.255457055208591,0,0,0,3.2953940669061,10.5225138648284,2.01046963380583,4.69325664519146,6.13717097592793,2.90903262383384,7.62533936418461,0.101839363850316,0.373220911830279,1.51633655060205,2.31486041475121,0.650602214813519,0.689706313300419,0.360124259610698,1.20563854268572,1.56483948048054,1.7935920839879,2.34254311399322,8.79591460512653,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.393528463494808,0,0.697601834251224,0.268273401399619,0.233530684734339,0.329119699826961,0.820837320395476,0.56748166682099,0.438599962275997,1.09775057645525,0.134206418760372,9.04246778825747,0.308713837137853,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0.948339504765408,1.48523066392647,1.1270773567308,2.44381593414377,3.29719228184964,1.47285221769669,2.02356918797623,2.95220295959204,4.86696056308262,3.70191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,4.4984984299053,0.709700426041343,0.178065603667255,0.162886959353576,1.81467135269789,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,2.38307724027652,0.720244376125241,1.29358683782755,0.857348140126369,0.177340233642274,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.578574190077352,0.785267825952089,0.259229946583586,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0.965947970160952,0.187682475451182,0,0.214368379079066,0.501572104035363,11.2950368523413,5.52390283808612,11.4579102687879,13.0608418581203,7.53590771747707,6.0431511791176,14.1754725048679,5.40385443869065,7.70342095273148,12.4262474820437,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.384150914429216,0.34461281373368,0,0.115884325944855,0,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.188218760830661,0.25384382367503,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.394017929502254,0,0.309873682371932,0.578719832943424,0.249810577937946,0,0.644613162144895,0,0,0
|short_description=p3@Crocc
|short_description=p3@Crocc
}}
}}

Latest revision as of 15:15, 26 September 2015

Short description:p3@Crocc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Crocc_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000102491_5end
EntrezGene:Crocc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Crocc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate9.02e-2549
occipital lobe2.15e-2110
visual cortex2.15e-2110
neocortex2.15e-2110
neurectoderm3.31e-2064
neural plate3.31e-2064
presumptive neural plate3.31e-2064
brain5.68e-2047
future brain5.68e-2047
regional part of brain1.35e-1846
anterior neural tube1.35e-1840
regional part of nervous system8.65e-1854
regional part of forebrain3.14e-1739
forebrain3.14e-1739
future forebrain3.14e-1739
ecto-epithelium8.50e-1773
neural tube9.55e-1652
neural rod9.55e-1652
future spinal cord9.55e-1652
neural keel9.55e-1652
brain grey matter1.17e-1529
regional part of telencephalon1.17e-1529
telencephalon1.17e-1529
ectoderm-derived structure1.51e-1595
ectoderm1.51e-1595
presumptive ectoderm1.51e-1595
regional part of cerebral cortex3.73e-1417
central nervous system6.07e-1473
nervous system2.18e-1375
cerebral cortex4.50e-1321
cerebral hemisphere4.50e-1321
pallium4.50e-1321
structure with developmental contribution from neural crest8.28e-1392
gray matter9.90e-1334
kidney1.02e-1114
kidney mesenchyme1.02e-1114
upper urinary tract1.02e-1114
kidney rudiment1.02e-1114
kidney field1.02e-1114
urinary system structure1.15e-0818
renal system4.19e-0819
cavitated compound organ3.80e-0721
eye4.63e-079
camera-type eye4.63e-079
simple eye4.63e-079
immature eye4.63e-079
ocular region4.63e-079
visual system4.63e-079
face4.63e-079
optic cup4.63e-079
optic vesicle4.63e-079
eye primordium4.63e-079
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