FFCP PHASE1:Mm9::chr6:4853298..4853346,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243725 | |EntrezGene=243725 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=Q7TN74 | |UniProt=Q7TN74 | ||
|association_with_transcript=0bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end | |association_with_transcript=0bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end | ||
|cluster_id=chr6:4853298..4853346,+ | |||
|description=CAGE_peak_2_at_Ppp1r9a_5end | |description=CAGE_peak_2_at_Ppp1r9a_5end | ||
|id=chr6:4853298..4853346,+ | |id=chr6:4853298..4853346,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.98e-08!23;CL:0000337!1.98e-08!23 | |ontology_enrichment_celltype=CL:0000117!1.98e-08!23;CL:0000337!1.98e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.70e-09,23;CL:0000337,4.70e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.79e-20!71;UBERON:0003075!8.79e-20!71;UBERON:0007284!8.79e-20!71;UBERON:0001049!9.23e-18!52;UBERON:0005068!9.23e-18!52;UBERON:0006241!9.23e-18!52;UBERON:0007135!9.23e-18!52;UBERON:0000033!3.89e-17!63;UBERON:0000955!4.85e-17!50;UBERON:0006238!4.85e-17!50;UBERON:0002616!2.03e-16!49;UBERON:0001017!4.95e-16!73;UBERON:0005743!4.95e-16!73;UBERON:0003056!9.66e-16!49;UBERON:0000073!4.39e-15!75;UBERON:0001016!4.39e-15!75;UBERON:0004121!4.54e-15!102;UBERON:0000924!4.54e-15!102;UBERON:0006601!4.54e-15!102;UBERON:0002020!5.85e-14!34;UBERON:0003080!7.12e-14!40;UBERON:0002780!2.67e-13!39;UBERON:0001890!2.67e-13!39;UBERON:0006240!2.67e-13!39;UBERON:0002791!1.57e-11!29;UBERON:0003528!1.57e-11!29;UBERON:0001893!1.57e-11!29;UBERON:0000468!2.75e-08!333;UBERON:0002021!4.68e-08!10;UBERON:0000411!4.68e-08!10;UBERON:0001950!4.68e-08!10;UBERON:0000956!1.59e-07!21;UBERON:0001869!1.59e-07!21;UBERON:0000203!1.59e-07!21;UBERON:0002619!2.02e-07!17;UBERON:0000153!4.08e-07!94;UBERON:0000025!8.78e-07!114 | |ontology_enrichment_uberon=UBERON:0002346!8.79e-20!71;UBERON:0003075!8.79e-20!71;UBERON:0007284!8.79e-20!71;UBERON:0001049!9.23e-18!52;UBERON:0005068!9.23e-18!52;UBERON:0006241!9.23e-18!52;UBERON:0007135!9.23e-18!52;UBERON:0000033!3.89e-17!63;UBERON:0000955!4.85e-17!50;UBERON:0006238!4.85e-17!50;UBERON:0002616!2.03e-16!49;UBERON:0001017!4.95e-16!73;UBERON:0005743!4.95e-16!73;UBERON:0003056!9.66e-16!49;UBERON:0000073!4.39e-15!75;UBERON:0001016!4.39e-15!75;UBERON:0004121!4.54e-15!102;UBERON:0000924!4.54e-15!102;UBERON:0006601!4.54e-15!102;UBERON:0002020!5.85e-14!34;UBERON:0003080!7.12e-14!40;UBERON:0002780!2.67e-13!39;UBERON:0001890!2.67e-13!39;UBERON:0006240!2.67e-13!39;UBERON:0002791!1.57e-11!29;UBERON:0003528!1.57e-11!29;UBERON:0001893!1.57e-11!29;UBERON:0000468!2.75e-08!333;UBERON:0002021!4.68e-08!10;UBERON:0000411!4.68e-08!10;UBERON:0001950!4.68e-08!10;UBERON:0000956!1.59e-07!21;UBERON:0001869!1.59e-07!21;UBERON:0000203!1.59e-07!21;UBERON:0002619!2.02e-07!17;UBERON:0000153!4.08e-07!94;UBERON:0000025!8.78e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.96e-20,54;UBERON:0002346,3.27e-19,64;UBERON:0003075,3.27e-19,64;UBERON:0007284,3.27e-19,64;UBERON:0001049,1.48e-18,52;UBERON:0005068,1.48e-18,52;UBERON:0006241,1.48e-18,52;UBERON:0007135,1.48e-18,52;UBERON:0003056,1.47e-16,49;UBERON:0001017,6.84e-16,73;UBERON:0000955,6.98e-16,47;UBERON:0006238,6.98e-16,47;UBERON:0002616,3.12e-15,46;UBERON:0001016,9.86e-15,75;UBERON:0010371,1.30e-14,73;UBERON:0002020,1.44e-14,34;UBERON:0003080,1.64e-14,40;UBERON:0002780,6.83e-14,39;UBERON:0001890,6.83e-14,39;UBERON:0006240,6.83e-14,39;UBERON:0010314,4.46e-13,92;UBERON:0004121,1.27e-12,95;UBERON:0000924,1.27e-12,95;UBERON:0006601,1.27e-12,95;UBERON:0003528,6.15e-12,29;UBERON:0002791,6.15e-12,29;UBERON:0001893,6.15e-12,29;UBERON:0002021,1.20e-08,10;UBERON:0000411,1.20e-08,10;UBERON:0001950,1.20e-08,10;UBERON:0000956,1.28e-07,21;UBERON:0001869,1.28e-07,21;UBERON:0000203,1.28e-07,21;UBERON:0002619,1.83e-07,17 | |||
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| ||
|short_description=p2@Ppp1r9a | |short_description=p2@Ppp1r9a | ||
}} | }} |
Latest revision as of 07:22, 27 September 2015
Short description: | p2@Ppp1r9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ppp1r9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000035813, NM_181595, uc009avy.1, uc009avz.1_5end |
EntrezGene: | Ppp1r9a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.70e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.70e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.96e-20 | 54 |
neurectoderm | 3.27e-19 | 64 |
neural plate | 3.27e-19 | 64 |
presumptive neural plate | 3.27e-19 | 64 |
neural tube | 1.48e-18 | 52 |
neural rod | 1.48e-18 | 52 |
future spinal cord | 1.48e-18 | 52 |
neural keel | 1.48e-18 | 52 |
pre-chordal neural plate | 1.47e-16 | 49 |
central nervous system | 6.84e-16 | 73 |
brain | 6.98e-16 | 47 |
future brain | 6.98e-16 | 47 |
regional part of brain | 3.12e-15 | 46 |
nervous system | 9.86e-15 | 75 |
ecto-epithelium | 1.30e-14 | 73 |
gray matter | 1.44e-14 | 34 |
anterior neural tube | 1.64e-14 | 40 |
regional part of forebrain | 6.83e-14 | 39 |
forebrain | 6.83e-14 | 39 |
future forebrain | 6.83e-14 | 39 |
structure with developmental contribution from neural crest | 4.46e-13 | 92 |
ectoderm-derived structure | 1.27e-12 | 95 |
ectoderm | 1.27e-12 | 95 |
presumptive ectoderm | 1.27e-12 | 95 |
brain grey matter | 6.15e-12 | 29 |
regional part of telencephalon | 6.15e-12 | 29 |
telencephalon | 6.15e-12 | 29 |
occipital lobe | 1.20e-08 | 10 |
visual cortex | 1.20e-08 | 10 |
neocortex | 1.20e-08 | 10 |
cerebral cortex | 1.28e-07 | 21 |
cerebral hemisphere | 1.28e-07 | 21 |
pallium | 1.28e-07 | 21 |
regional part of cerebral cortex | 1.83e-07 | 17 |