FFCP PHASE1:Mm9::chr8:35209807..35209822,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68192 | |EntrezGene=68192 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3674 | |MCL_coexpression_id=3674 | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQ74 | |UniProt=Q9CQ74 | ||
|association_with_transcript=-14bp_to_NM_026609,uc009lkp.1_5end | |association_with_transcript=-14bp_to_NM_026609,uc009lkp.1_5end | ||
|cluster_id=chr8:35209807..35209822,- | |||
|description=CAGE_peak_3_at_Leprotl1_5end | |description=CAGE_peak_3_at_Leprotl1_5end | ||
|id=chr8:35209807..35209822,- | |id=chr8:35209807..35209822,- | ||
|ontology_enrichment_celltype=CL:0002319!7.03e-16!43;CL:0000055!1.43e-15!50;CL:0000221!2.83e-15!44;CL:0000133!2.83e-15!44;CL:0000393!2.40e-12!39;CL:0000211!2.40e-12!39;CL:0000540!1.56e-11!33;CL:0000047!1.56e-11!33;CL:0000031!1.56e-11!33;CL:0000404!1.56e-11!33;CL:0002321!1.15e-10!70;CL:0000220!1.15e-10!70;CL:0000117!2.77e-10!23;CL:0000337!2.77e-10!23;CL:0002371!7.10e-10!118;CL:0000144!4.09e-09!121;CL:0000012!4.09e-09!121;CL:0000548!4.72e-09!115;CL:0000004!4.72e-09!115;CL:0000255!4.72e-09!115;CL:0000723!1.06e-08!91;CL:0000048!1.06e-08!91;CL:0000034!3.26e-08!97 | |ontology_enrichment_celltype=CL:0002319!7.03e-16!43;CL:0000055!1.43e-15!50;CL:0000221!2.83e-15!44;CL:0000133!2.83e-15!44;CL:0000393!2.40e-12!39;CL:0000211!2.40e-12!39;CL:0000540!1.56e-11!33;CL:0000047!1.56e-11!33;CL:0000031!1.56e-11!33;CL:0000404!1.56e-11!33;CL:0002321!1.15e-10!70;CL:0000220!1.15e-10!70;CL:0000117!2.77e-10!23;CL:0000337!2.77e-10!23;CL:0002371!7.10e-10!118;CL:0000144!4.09e-09!121;CL:0000012!4.09e-09!121;CL:0000548!4.72e-09!115;CL:0000004!4.72e-09!115;CL:0000255!4.72e-09!115;CL:0000723!1.06e-08!91;CL:0000048!1.06e-08!91;CL:0000034!3.26e-08!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.92e-16,43;CL:0000221,2.79e-15,44;CL:0000133,2.79e-15,44;CL:0000393,2.37e-12,39;CL:0000211,2.37e-12,39;CL:0000540,1.54e-11,33;CL:0000047,1.54e-11,33;CL:0000031,1.54e-11,33;CL:0000404,1.54e-11,33;CL:0002321,9.05e-11,70;CL:0000117,2.74e-10,23;CL:0000337,2.74e-10,23;CL:0000723,7.87e-09,91;CL:0000048,7.87e-09,91;CL:0000034,2.46e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.10e-19!75;UBERON:0001016!1.10e-19!75;UBERON:0001017!4.72e-19!73;UBERON:0005743!4.72e-19!73;UBERON:0004121!2.97e-14!102;UBERON:0000924!2.97e-14!102;UBERON:0006601!2.97e-14!102;UBERON:0007811!1.11e-12!86;UBERON:0000955!3.05e-12!50;UBERON:0006238!3.05e-12!50;UBERON:0002616!3.42e-12!49;UBERON:0001049!4.01e-12!52;UBERON:0005068!4.01e-12!52;UBERON:0006241!4.01e-12!52;UBERON:0007135!4.01e-12!52;UBERON:0000153!3.24e-11!94;UBERON:0002346!3.86e-10!71;UBERON:0003075!3.86e-10!71;UBERON:0007284!3.86e-10!71;UBERON:0000033!8.32e-10!63;UBERON:0002020!1.09e-09!34;UBERON:0003080!8.25e-09!40;UBERON:0000480!1.63e-08!308;UBERON:0000467!1.63e-08!308;UBERON:0002791!1.66e-08!29;UBERON:0003528!1.66e-08!29;UBERON:0001893!1.66e-08!29;UBERON:0002050!2.05e-08!317;UBERON:0005423!2.05e-08!317;UBERON:0002780!2.21e-08!39;UBERON:0001890!2.21e-08!39;UBERON:0006240!2.21e-08!39;UBERON:0000923!1.01e-07!314;UBERON:0005291!1.01e-07!314;UBERON:0006598!1.01e-07!314;UBERON:0002532!1.01e-07!314;UBERON:0003056!2.23e-07!49;UBERON:0000064!7.08e-07!99;UBERON:0000063!8.38e-07!35 | |ontology_enrichment_uberon=UBERON:0000073!1.10e-19!75;UBERON:0001016!1.10e-19!75;UBERON:0001017!4.72e-19!73;UBERON:0005743!4.72e-19!73;UBERON:0004121!2.97e-14!102;UBERON:0000924!2.97e-14!102;UBERON:0006601!2.97e-14!102;UBERON:0007811!1.11e-12!86;UBERON:0000955!3.05e-12!50;UBERON:0006238!3.05e-12!50;UBERON:0002616!3.42e-12!49;UBERON:0001049!4.01e-12!52;UBERON:0005068!4.01e-12!52;UBERON:0006241!4.01e-12!52;UBERON:0007135!4.01e-12!52;UBERON:0000153!3.24e-11!94;UBERON:0002346!3.86e-10!71;UBERON:0003075!3.86e-10!71;UBERON:0007284!3.86e-10!71;UBERON:0000033!8.32e-10!63;UBERON:0002020!1.09e-09!34;UBERON:0003080!8.25e-09!40;UBERON:0000480!1.63e-08!308;UBERON:0000467!1.63e-08!308;UBERON:0002791!1.66e-08!29;UBERON:0003528!1.66e-08!29;UBERON:0001893!1.66e-08!29;UBERON:0002050!2.05e-08!317;UBERON:0005423!2.05e-08!317;UBERON:0002780!2.21e-08!39;UBERON:0001890!2.21e-08!39;UBERON:0006240!2.21e-08!39;UBERON:0000923!1.01e-07!314;UBERON:0005291!1.01e-07!314;UBERON:0006598!1.01e-07!314;UBERON:0002532!1.01e-07!314;UBERON:0003056!2.23e-07!49;UBERON:0000064!7.08e-07!99;UBERON:0000063!8.38e-07!35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.08e-19,75;UBERON:0001017,4.64e-19,73;UBERON:0004121,2.11e-15,95;UBERON:0000924,2.11e-15,95;UBERON:0006601,2.11e-15,95;UBERON:0000073,1.71e-13,54;UBERON:0001049,3.97e-12,52;UBERON:0005068,3.97e-12,52;UBERON:0006241,3.97e-12,52;UBERON:0007135,3.97e-12,52;UBERON:0002346,1.91e-11,64;UBERON:0003075,1.91e-11,64;UBERON:0007284,1.91e-11,64;UBERON:0000955,1.38e-10,47;UBERON:0006238,1.38e-10,47;UBERON:0002616,1.57e-10,46;UBERON:0002020,1.08e-09,34;UBERON:0010371,1.13e-09,73;UBERON:0003080,8.18e-09,40;UBERON:0010314,8.33e-09,92;UBERON:0003528,1.65e-08,29;UBERON:0002791,1.65e-08,29;UBERON:0001893,1.65e-08,29;UBERON:0002780,2.19e-08,39;UBERON:0001890,2.19e-08,39;UBERON:0006240,2.19e-08,39;UBERON:0002050,2.54e-08,294;UBERON:0011216,3.66e-08,194;UBERON:0005423,6.56e-08,304;UBERON:0000923,9.64e-08,291;UBERON:0010316,9.64e-08,291;UBERON:0005291,9.64e-08,291;UBERON:0006598,9.64e-08,291;UBERON:0010317,9.64e-08,291;UBERON:0002532,9.64e-08,291;UBERON:0003056,2.20e-07,49 | |||
|phase1_expression=1.92178616525753,0,1.81999695755814,1.51232105653415,1.00179145989269,0.839396359559449,1.63528848416868,12.1375924035082,2.111830832275,1.63845168425395,7.0199366972457,3.27065851880879,14.8944635040149,11.8017543265646,2.33176833270964,1.21485160433896,0.699561878128147,2.05050407482854,1.7824876368746,1.69755860719212,2.21112554392781,2.38298282882125,2.35079810225042,2.07990149631429,4.81759490241057,1.14846392823004,4.73838195774982,2.80112602491656,6.46079626151671,3.02436155711917,3.54768817048488,0,1.23012957516914,0,0.288851619751275,1.32987716286794,0.408338712524738,5.4409111995798,4.6880120671428,4.71171369576418,11.7646297606203,7.5135003345429,1.94204141212461,1.88845226963366,2.33166941804883,4.40512205188036,9.38869613217647,5.88667922227206,5.93152693383074,7.97162586204562,5.87942970826523,8.62515386189829,0.838913030288682,10.8804321301702,13.1076581665561,10.0331180054019,7.73640287834643,6.70373719960675,6.67644320836673,6.87688273053643,5.07065122804943,12.1984031544888,8.00365316500025,10.7987966073768,10.8775299882367,10.6572017241915,5.09320187881288,6.14749288514487,4.35496371695606,4.99521971827255,4.83747411108179,5.71301968807607,5.07997644188711,5.14461356702807,4.31304619582064,11.9498442259303,13.2139057199266,10.0872997087298,9.67721159514334,9.10015385338338,6.12967212136145,9.37644067002168,8.37548997004143,7.87867654044352,5.80633341551878,4.12480019663135,3.27454865837937,4.65998614563251,4.69502398665741,4.53429360640713,1.44932244350839,0,3.39985666853875,5.93673510801599,5.84798775702902,3.13618820968135,1.54488862144927,2.04516387093669,4.41636207824877,7.42013106471715,1.97180787687353,5.13305909657271,2.54805239706646,0,11.6905162146056,11.6545538118545,11.1215377903252,3.4255163915718,5.95557132388495,2.3750742250372,2.77576522825817,2.13125834818499,2.7673859670727,1.80867168663147,2.58695155698551,2.01066546127481,0.988779870937496,2.60278842455841,2.65383165584962,0.970601099684455,1.54589062922275,1.93950101254089,3.72783522436244,2.92780797011547,4.60782754989601,4.85368404896324,1.31796636956512,1.19980546198682,0.508280908292259,6.74057877321702,5.49000723382352,2.89005009859588,3.99795936442236,2.81287003063364,4.36354893575076,4.2182728397617,2.24046600470696,2.23932547098167,3.0326731012041,0.631325567659422,2.60240885925407,3.67843367093557,3.06105620669094,2.56198190320716,2.85753296435577,3.45907044769094,1.96773621575431,2.06962696591213,2.37124792226126,1.70195472151037,1.58356011747554,1.53437012699302,1.39023624612799,2.78601733217733,3.08673204611915,1.39323986772945,0.702213187313235,1.80143534980301,3.12579849335152,2.69263504296152,3.75241695969754,2.88099298337624,2.13070262026689,1.57411385397923,1.07986979021165,4.18561100550734,2.14618721119695,1.98501082024188,2.13927804887525,2.13417703302824,2.35099547682982,2.63159977365598,2.19550115291051,2.28150911892632,3.57492912559016,1.23485534855141,3.30418782983798,4.49565963328025,2.13288250535234,0.928946687441754,1.03093969057675,1.21010114774006,1.77902435075896,1.90225626112559,5.21981967698963,2.79988223030818,1.25667604400135,2.18852119245266,1.9496408711912,1.79763881730844,5.18731319699266,4.97853183135918,3.03468641524931,2.74196430263349,2.25415471346161,3.46207257337034,1.16371492300575,2.17421041659988,1.83385957660346,1.32849133181642,2.66897837330337,2.09775178667061,1.77871576252289,2.00214126859313,0.393117990226406,1.12431056192427,0,0.964708639009667,1.2731292589071,2.5892652370573,2.7562988551756,1.92192989231657,2.87536413054709,1.86070473834252,3.12037673114561,3.03094653536534,2.33216637578486,1.92977408545347,2.95605104266567,1.89491411770485,0.977789858652155,2.20668611507745,3.05097322775053,1.00503754465089,2.14239276797412,3.51240566144038,3.78324345854858,3.32197034473162,2.23236676120482,1.3109065177259,2.59027472798843,2.31438493730419,12.0633027151418,23.9318500880232,1.47529281905711,2.20749397043786,6.58257418949947,4.10240903072711,1.47541450839008,1.51482556322624,4.73262329124385,5.0757036758563,4.73931475012158,3.82350076724083,2.89638276307112,3.96307143104365,4.85772842009873,5.84511715822624,4.74345333535828,3.21321316421807,1.98716119291576,3.02711526234334,1.95464351224291,3.29940245945071,2.65490276679926,1.94224508923985,2.41858845571801,1.69744571780308,2.36241514304618,4.30409207121498,2.32585463851399,2.54473610634254,2.13898427030833,1.58018378967908,1.05418608574999,7.21948802737308,3.06395645178409,2.34079422240703,3.49268446213437,4.07240366560025,2.30542303734956,2.85390108163313,2.63278432963394,3.04464949114599,2.58138878870081,4.02480934641258,2.42581237860458,1.81374878235628,3.22928853391811,2.71408162176701,2.86493625607528,2.9545361954111,4.37221254944776,5.00648315428376,2.05045056957423,1.65109494370578,1.66675074632741,0.941842285023455,1.23024804948923,1.83022538565218,1.5298058699447,1.6794174278839,2.21119958087078,6.68269432610579,0.790839983952838,3.25311147402958,1.72808545314882,1.04544148007234,1.09181281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| ||
|short_description=p3@Leprotl1 | |short_description=p3@Leprotl1 | ||
}} | }} |
Latest revision as of 22:32, 1 October 2015
Short description: | p3@Leprotl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Leprotl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3674 |
Association with transcript: | -14bp_to_NM_026609, uc009lkp.1_5end |
EntrezGene: | Leprotl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.92e-16 | 43 |
ectodermal cell | 2.79e-15 | 44 |
neurectodermal cell | 2.79e-15 | 44 |
electrically responsive cell | 2.37e-12 | 39 |
electrically active cell | 2.37e-12 | 39 |
neuron | 1.54e-11 | 33 |
neuronal stem cell | 1.54e-11 | 33 |
neuroblast | 1.54e-11 | 33 |
electrically signaling cell | 1.54e-11 | 33 |
embryonic cell | 9.05e-11 | 70 |
CNS neuron (sensu Vertebrata) | 2.74e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.74e-10 | 23 |
somatic stem cell | 7.87e-09 | 91 |
multi fate stem cell | 7.87e-09 | 91 |
stem cell | 2.46e-08 | 97 |