FFCP PHASE1:Hg19::chr3:127348005..127348063,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:127348005..127348063,+
|short_description=p1@PODXL2
|description=CAGE_peak_1_at_PODXL2_5end
|association_with_transcript=0bp_to_ENST00000302192,ENST0000034...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50512 | |EntrezGene=50512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17936 | |HGNC=17936 | ||
|TSSclassifier=strong | |||
|UniProt=C9J0Q6,Q9NZ53 | |UniProt=C9J0Q6,Q9NZ53 | ||
|association_with_transcript=0bp_to_ENST00000302192,ENST00000342480,NM_015720,uc003ejq.2_5end | |||
|cluster_id=chr3:127348005..127348063,+ | |||
|coexpression_cluster_id=C3396 | |||
|description=CAGE_peak_1_at_PODXL2_5end | |||
|id=chr3:127348005..127348063,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.38e-10!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.54e-11,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.25e-10;82 | |||
|ontology_enrichment_disease=DOID:0050687!3.18e-16!143;DOID:305!1.36e-14!106;DOID:162!4.23e-11!235;DOID:14566!7.84e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.19e-17,143;DOID:305,1.04e-15,106;DOID:162,2.96e-13,235;DOID:14566,4.88e-13,239 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.76e-31!94;UBERON:0001016!2.76e-31!94;UBERON:0005743!6.52e-31!86;UBERON:0001017!1.12e-29!82;UBERON:0002346!1.89e-26!90;UBERON:0001049!2.97e-25!57;UBERON:0005068!2.97e-25!57;UBERON:0006241!2.97e-25!57;UBERON:0007135!2.97e-25!57;UBERON:0003075!6.11e-25!86;UBERON:0007284!6.11e-25!86;UBERON:0000955!3.43e-24!69;UBERON:0006238!3.43e-24!69;UBERON:0002616!7.92e-22!59;UBERON:0002780!8.20e-20!41;UBERON:0001890!8.20e-20!41;UBERON:0006240!8.20e-20!41;UBERON:0003056!2.55e-19!61;UBERON:0000924!6.52e-19!173;UBERON:0006601!6.52e-19!173;UBERON:0003080!7.88e-19!42;UBERON:0004121!1.20e-17!169;UBERON:0002020!6.26e-17!34;UBERON:0003528!6.26e-17!34;UBERON:0001893!8.20e-17!34;UBERON:0002791!3.43e-16!33;UBERON:0001869!4.02e-16!32;UBERON:0000033!7.61e-16!123;UBERON:0000153!1.06e-14!129;UBERON:0007811!1.06e-14!129;UBERON:0000956!3.83e-13!25;UBERON:0000203!3.83e-13!25;UBERON:0002619!6.06e-13!22;UBERON:0000119!8.72e-13!312;UBERON:0000483!8.96e-13!309;UBERON:0000025!3.47e-12!194;UBERON:0000064!3.87e-12!219;UBERON:0001950!5.51e-12!20;UBERON:0007023!1.02e-11!115;UBERON:0000481!1.49e-10!347;UBERON:0000477!1.48e-09!286;UBERON:0004111!7.30e-09!241;UBERON:0000063!7.91e-09!97;UBERON:0003076!1.32e-07!15;UBERON:0003057!1.32e-07!15;UBERON:0000475!1.92e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.90e-15;32!UBERON:0003528;6.28e-15;34!UBERON:0002020;6.28e-15;34!UBERON:0001893;6.54e-15;34!UBERON:0002791;1.00e-14;32!UBERON:0002780;1.08e-14;41!UBERON:0001890;1.08e-14;41!UBERON:0000073;1.34e-14;53!UBERON:0002616;1.34e-14;53!UBERON:0000956;1.95e-13;25!UBERON:0000203;1.95e-13;25!UBERON:0002619;3.10e-13;22!UBERON:0001950;3.01e-12;20!UBERON:0000955;4.33e-12;68!UBERON:0001017;1.08e-11;75!UBERON:0001016;1.94e-11;83!UBERON:0004732;8.71e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.58e-31,89;UBERON:0001017,2.96e-31,81;UBERON:0002346,9.02e-28,86;UBERON:0001049,1.03e-26,56;UBERON:0005068,1.03e-26,56;UBERON:0006241,1.03e-26,56;UBERON:0007135,1.03e-26,56;UBERON:0003075,3.17e-26,82;UBERON:0007284,3.17e-26,82;UBERON:0000955,1.24e-25,68;UBERON:0006238,1.24e-25,68;UBERON:0000073,3.24e-25,53;UBERON:0002616,3.24e-25,53;UBERON:0011216,3.36e-24,223;UBERON:0010371,8.13e-22,104;UBERON:0003056,8.47e-21,61;UBERON:0002780,3.67e-20,41;UBERON:0001890,3.67e-20,41;UBERON:0003080,3.67e-20,41;UBERON:0006240,3.67e-20,41;UBERON:0004121,2.82e-19,171;UBERON:0000924,2.82e-19,171;UBERON:0006601,2.82e-19,171;UBERON:0003528,3.18e-17,34;UBERON:0002020,3.18e-17,34;UBERON:0001893,4.19e-17,34;UBERON:0001869,2.12e-16,32;UBERON:0002791,4.24e-16,32;UBERON:0000956,2.30e-13,25;UBERON:0000203,2.30e-13,25;UBERON:0002619,3.68e-13,22;UBERON:0000119,6.21e-13,309;UBERON:0000483,6.37e-13,306;UBERON:0000025,1.75e-12,192;UBERON:0001950,3.48e-12,20;UBERON:0010314,1.33e-11,132;UBERON:0007023,3.30e-11,114;UBERON:0004111,5.14e-09,240;UBERON:0003076,1.01e-07,15;UBERON:0003057,1.01e-07,15;UBERON:0004732,9.35e-07,13 | |||
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| ||
|short_description=p1@PODXL2 | |||
}} | }} |
Latest revision as of 05:22, 20 September 2015
Short description: | p1@PODXL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PODXL2_5end |
Coexpression cluster: | C3396_brain_occipital_duodenum_temporal_parietal_small_Neurons |
Association with transcript: | 0bp_to_ENST00000302192, ENST00000342480, NM_015720, uc003ejq.2_5end |
EntrezGene: | PODXL2 |
HGNC: | 17936 |
UniProt: | C9J0Q6Q9NZ53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.54e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.19e-17 | 143 |
carcinoma | 1.04e-15 | 106 |
cancer | 2.96e-13 | 235 |
disease of cellular proliferation | 4.88e-13 | 239 |