FFCP PHASE1:Hg19::chr4:2420416..2420440,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:2420416..2420440,-
|short_description=p4@ZFYVE28
|description=CAGE_peak_4_at_ZFYVE28_5end
|association_with_transcript=-26bp_to_ENST00000290974_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57732 | |EntrezGene=57732 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29334 | |HGNC=29334 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCC9 | |UniProt=Q9HCC9 | ||
|association_with_transcript=-26bp_to_ENST00000290974_5end | |||
|cluster_id=chr4:2420416..2420440,- | |||
|coexpression_cluster_id=C2519 | |||
|description=CAGE_peak_4_at_ZFYVE28_5end | |||
|id=chr4:2420416..2420440,- | |||
|ontology_enrichment_celltype=CL:0002087!1.11e-09!119;CL:0002031!2.02e-09!124;CL:0000738!3.17e-09!140;CL:0000791!1.28e-08!18;CL:0000789!1.28e-08!18;CL:0002420!1.28e-08!18;CL:0002419!1.28e-08!18;CL:0000790!1.28e-08!18;CL:0000084!4.20e-08!25;CL:0000827!4.20e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.29e-15;18!CL:0000789;3.29e-15;18!CL:0002419;3.29e-15;18!CL:0000084;6.31e-12;25!CL:0000624;6.45e-08;6!CL:0000625;7.53e-08;11!CL:0000623;1.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.14e-16,18;CL:0000789,8.14e-16,18;CL:0002420,8.14e-16,18;CL:0002419,8.14e-16,18;CL:0000790,8.14e-16,18;CL:0000084,2.21e-12,25;CL:0000827,2.21e-12,25;CL:0000738,2.71e-11,136;CL:0002031,1.70e-10,120;CL:0002087,2.97e-10,115;CL:0000624,2.64e-08,6;CL:0000625,3.26e-08,11;CL:0000623,1.92e-07,3;CL:0000825,1.92e-07,3;CL:0000037,2.86e-07,168;CL:0000838,6.67e-07,52;CL:0002032,8.86e-07,161;CL:0000837,8.86e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;3.29e-15;18!UBERON:0006215;1.22e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-21!115;UBERON:0001049!1.71e-16!57;UBERON:0005068!1.71e-16!57;UBERON:0006241!1.71e-16!57;UBERON:0007135!1.71e-16!57;UBERON:0002616!9.40e-15!59;UBERON:0000955!7.09e-14!69;UBERON:0006238!7.09e-14!69;UBERON:0001017!9.10e-13!82;UBERON:0003080!1.69e-12!42;UBERON:0005743!2.68e-12!86;UBERON:0003075!3.17e-12!86;UBERON:0007284!3.17e-12!86;UBERON:0002780!3.69e-12!41;UBERON:0001890!3.69e-12!41;UBERON:0006240!3.69e-12!41;UBERON:0002346!5.69e-11!90;UBERON:0000073!1.36e-10!94;UBERON:0001016!1.36e-10!94;UBERON:0002020!1.10e-09!34;UBERON:0003528!1.10e-09!34;UBERON:0001893!1.77e-09!34;UBERON:0002791!6.23e-09!33;UBERON:0001869!1.08e-08!32;UBERON:0002390!2.02e-08!102;UBERON:0003061!2.02e-08!102;UBERON:0002619!3.78e-08!22;UBERON:0000153!1.08e-07!129;UBERON:0007811!1.08e-07!129;UBERON:0002193!1.61e-07!112;UBERON:0003056!2.91e-07!61;UBERON:0001950!3.91e-07!20;UBERON:0000033!4.16e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.47e-14;34!UBERON:0002020;1.47e-14;34!UBERON:0002780;9.20e-14;41!UBERON:0001890;9.20e-14;41!UBERON:0002791;2.07e-13;32!UBERON:0001869;5.04e-13;32!UBERON:0001893;5.36e-13;34!UBERON:0000073;6.45e-13;53!UBERON:0002616;6.45e-13;53!UBERON:0002619;3.14e-12;22!UBERON:0000956;2.06e-10;25!UBERON:0000203;2.06e-10;25!UBERON:0001950;6.31e-10;20!UBERON:0000125;1.75e-09;9!UBERON:0002308;1.75e-09;9!UBERON:0000955;2.57e-08;68!UBERON:0002420;4.01e-07;9!UBERON:0007245;4.01e-07;9!UBERON:0010009;4.01e-07;9!UBERON:0010011;4.01e-07;9!UBERON:0000454;4.01e-07;9!UBERON:0009663;8.89e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.56e-22,53;UBERON:0002616,1.56e-22,53;UBERON:0001049,1.72e-22,56;UBERON:0005068,1.72e-22,56;UBERON:0006241,1.72e-22,56;UBERON:0007135,1.72e-22,56;UBERON:0002780,2.71e-18,41;UBERON:0001890,2.71e-18,41;UBERON:0003080,2.71e-18,41;UBERON:0006240,2.71e-18,41;UBERON:0003528,1.03e-17,34;UBERON:0002020,1.03e-17,34;UBERON:0007023,4.51e-17,114;UBERON:0000955,8.84e-17,68;UBERON:0006238,8.84e-17,68;UBERON:0001893,7.25e-16,34;UBERON:0001869,2.33e-15,32;UBERON:0002791,3.22e-15,32;UBERON:0001017,5.67e-15,81;UBERON:0003075,1.07e-13,82;UBERON:0007284,1.07e-13,82;UBERON:0002346,1.14e-12,86;UBERON:0001016,1.26e-12,89;UBERON:0002619,3.62e-12,22;UBERON:0000956,2.32e-10,25;UBERON:0000203,2.32e-10,25;UBERON:0003056,2.75e-10,61;UBERON:0001950,6.71e-10,20;UBERON:0010371,7.01e-10,104;UBERON:0000125,9.53e-10,9;UBERON:0002308,9.53e-10,9;UBERON:0002390,8.85e-08,98;UBERON:0003061,8.85e-08,98;UBERON:0010314,2.45e-07,132;UBERON:0002420,3.06e-07,9;UBERON:0007245,3.06e-07,9;UBERON:0010009,3.06e-07,9;UBERON:0010011,3.06e-07,9;UBERON:0000454,3.06e-07,9;UBERON:0002193,5.01e-07,108;UBERON:0009663,8.14e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0.263766978228454,0,0,0,0,0,0,0,0.816002764977012,0,0,0,0,0.229240217243854,0.410502947249729,0.236132343941038,0.786728553697808,1.91914699048606,2.01260960310899,0,0,0.369754010166788,0,0.142169232487422,0,2.21598163412751,1.60435557976113,2.17010870715852,0.447830948479849,1.29557466407592,0.257575567634187,0.290796477559129,0.755751887377619,0,0.697287110717054,1.23350366406548,0,0.28769239232215,0.512321413058201,0.236482229888585,0.689491361473237,0.645484683583826,0,1.31769637679823,0.545812300115692,0,1.83650335422542,0.320929027076094,0.639337125799041,1.31940520074686,1.39624560335142,0.852449501065388,0.580418477257168,0.56738522469114,1.24564449799115,1.50749199154046,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0,0,1.12328631146495,0.600707571366025,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,1.96709770113833,1.96505381374582,2.87842098599313,2.67498392625085,0.977766799900771,0.473447805734733,0,1.78256731016278,2.06224135232386,1.10766947291811,1.89562704635511,2.81800903396485,2.86130564631732,0.657751618414705,1.10540007114339,0.579606171470105,0.889719378972363,0,0,2.26618685395132,1.14966148080576,1.03088233644789,1.01207876807801,1.59282707162048,0,0,1.20460095262218,0.639933055772092,2.49861453104692,0.473554504088034,1.64225599384209,1.81446068902259,4.54648332831962,3.76543450095277,0,0,0,0,0,0.724232594804119,0.795285947051099,0,0,0.221729397462564,0.087834785693126,0.458426764241994,0,0,0.97364218096405,1.0447784237956,1.06366368415092,0,0,0,0,0,0,1.13061588384802,1.67799774483962,0,0.626984899610432,0.258416759169329,0,0.33472061276467,0.402829317109147,1.52054421143703,0.488124115096339,0.367663080345869,0,0.267899184852239,0.22452937262617,1.12611480483322,0,0,0.916008719652036,0,0,0.436094052142534,0,0.759783069987479,0.132409180813219,0.573673241497627,1.06400514659507,0,0,0,0,0.269421344139376,0.653847612453835,0.151357427644931,0.576175924479999,0,0,0,0,0.587172493218824,0.323745888736263,0.280901613404497,0.408308342509787,0.61417158655884,0.103325781175765,0,0,0,0,0.505008341862199,0.375355559615893,0.277064115484183,0,0,0.45071417671979,0.226864366320042,0.358779271377724,0.213557388818567,0,0.300091096084402,0.412210116953756,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.866198686566443,0,0,0.790204397959275,0,0.738651018262192,1.17002132569619,1.0404181360211,0,0,0,0,0,0,0,0.264145302039678,5.39053100406007,4.03535869567492,7.06957627187728,0.380987365753014,0,1.17217447210047,0,0.616964956219941,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0,0,0,0,0,0,0,0.799783929456456,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0.537182889719687,1.12085143993527,2.36436912242313,6.253199670926,4.2353201972317,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0.300946099727719,0,0,0,0.368738337083406,0.173767228936166,0.979005787313703,0,1.44737618286021,0.647142602455851,2.02782359826544,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0.515205058238611,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0,0,0.876901770507525,0,0,0,0.30982349809975,0.563391205064483,0,0,0.35667105148125,0,0.211107635297664,0,0,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,1.42939065274673,2.46817363851717,1.29694662238543,0,2.37937552888281,0.640944426764839,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0.481764225311099,0,0.425846237690326,0.687010689511529,0,0,0,0,0,0,0,0,0,0.18714054040822,0.879049075631364,0.485442086998054,3.78907506543426,0.284136146806413,0.71623345421307,0,0.307160702099232,0.994147647766298,1.54736358051564,0.779160935160341,0.659215496907038,0,0.597743964753209,0.828851746593443,0,0.715880777515084,0,0.311039587661807,0.179736702294654,0,0,0.295930216910801,2.3948309234694,1.11136990144637,1.93866549219044,0.74214478529481,0,0.520855522170466,0.0874599999961957,0.724999575434793,0,0,0.472775363535873,0,0.291604613383254,0,0.885741385813839,2.17073589525734,4.5774520895125,6.7453348558047,5.02430952221031,0.438770794307945,0.21787692703798,0.278847488557207,0.538651809526579,0.227884111694002,0,0,0,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| ||
|short_description=p4@ZFYVE28 | |||
}} | }} |
Latest revision as of 09:42, 17 September 2015
Short description: | p4@ZFYVE28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZFYVE28_5end |
Coexpression cluster: | C2519_cerebellum_CD8_Natural_CD4_Mast_Basophils_Peripheral |
Association with transcript: | -26bp_to_ENST00000290974_5end |
EntrezGene: | ZFYVE28 |
HGNC: | 29334 |
UniProt: | Q9HCC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.14e-16 | 18 |
alpha-beta T cell | 8.14e-16 | 18 |
immature T cell | 8.14e-16 | 18 |
mature T cell | 8.14e-16 | 18 |
immature alpha-beta T cell | 8.14e-16 | 18 |
T cell | 2.21e-12 | 25 |
pro-T cell | 2.21e-12 | 25 |
leukocyte | 2.71e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.70e-10 | 120 |
nongranular leukocyte | 2.97e-10 | 115 |
CD4-positive, alpha-beta T cell | 2.64e-08 | 6 |
CD8-positive, alpha-beta T cell | 3.26e-08 | 11 |
natural killer cell | 1.92e-07 | 3 |
pro-NK cell | 1.92e-07 | 3 |
hematopoietic stem cell | 2.86e-07 | 168 |
lymphoid lineage restricted progenitor cell | 6.67e-07 | 52 |
hematopoietic oligopotent progenitor cell | 8.86e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.86e-07 | 161 |