FFCP PHASE1:Hg19::chr5:61602055..61602083,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:61602055..61602083,+
|short_description=p3@KIF2A
|description=CAGE_peak_3_at_KIF2A_5end
|association_with_transcript=0bp_to_ENST00000381103_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3796 | |EntrezGene=3796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6318 | |HGNC=6318 | ||
|TSSclassifier=strong | |||
|UniProt=E9PB70 | |UniProt=E9PB70 | ||
|association_with_transcript=0bp_to_ENST00000381103_5end | |||
|cluster_id=chr5:61602055..61602083,+ | |||
|coexpression_cluster_id=C1600 | |||
|description=CAGE_peak_3_at_KIF2A_5end | |||
|id=chr5:61602055..61602083,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.46e-10!52;CL:0000542!2.64e-10!53;CL:0000051!2.64e-10!53;CL:0000084!1.56e-08!25;CL:0000827!1.56e-08!25;CL:0000791!3.68e-07!18;CL:0000789!3.68e-07!18;CL:0002420!3.68e-07!18;CL:0002419!3.68e-07!18;CL:0000790!3.68e-07!18;CL:0000037!9.16e-07!172;CL:0000566!9.16e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.42e-08;25!CL:0000791;3.42e-07;18!CL:0000789;3.42e-07;18!CL:0002419;3.42e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.46e-10,52;CL:0000542,2.64e-10,53;CL:0000051,2.64e-10,53;CL:0000084,1.56e-08,25;CL:0000827,1.56e-08,25;CL:0000791,3.68e-07,18;CL:0000789,3.68e-07,18;CL:0002420,3.68e-07,18;CL:0002419,3.68e-07,18;CL:0000790,3.68e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.06e-08;82!CL:0000790;3.42e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!1.76e-08!51;DOID:0060083!1.76e-08!51;DOID:1240!5.36e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.76e-08,51;DOID:0060083,1.76e-08,51;DOID:1240,5.36e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-28!115;UBERON:0000073!2.42e-23!94;UBERON:0001016!2.42e-23!94;UBERON:0001049!2.51e-23!57;UBERON:0005068!2.51e-23!57;UBERON:0006241!2.51e-23!57;UBERON:0007135!2.51e-23!57;UBERON:0001017!5.80e-22!82;UBERON:0005743!1.48e-20!86;UBERON:0003080!4.51e-20!42;UBERON:0002780!1.32e-19!41;UBERON:0001890!1.32e-19!41;UBERON:0006240!1.32e-19!41;UBERON:0000955!3.11e-19!69;UBERON:0006238!3.11e-19!69;UBERON:0002616!7.45e-18!59;UBERON:0002020!2.01e-16!34;UBERON:0003528!2.01e-16!34;UBERON:0001893!3.06e-16!34;UBERON:0002791!7.77e-16!33;UBERON:0001869!4.75e-15!32;UBERON:0002619!2.27e-13!22;UBERON:0003075!4.38e-13!86;UBERON:0007284!4.38e-13!86;UBERON:0002346!1.62e-12!90;UBERON:0001950!4.14e-12!20;UBERON:0000956!1.51e-11!25;UBERON:0000203!1.51e-11!25;UBERON:0003056!8.86e-11!61;UBERON:0000153!8.13e-10!129;UBERON:0007811!8.13e-10!129;UBERON:0004121!1.75e-09!169;UBERON:0000924!2.87e-09!173;UBERON:0006601!2.87e-09!173;UBERON:0000178!3.33e-09!15;UBERON:0000179!3.33e-09!15;UBERON:0000463!3.33e-09!15;UBERON:0000033!8.59e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.20e-14;41!UBERON:0001890;1.20e-14;41!UBERON:0003528;4.93e-14;34!UBERON:0002020;4.93e-14;34!UBERON:0002791;6.24e-14;32!UBERON:0001893;7.29e-14;34!UBERON:0001869;8.79e-14;32!UBERON:0002619;2.15e-13;22!UBERON:0000073;2.42e-12;53!UBERON:0002616;2.42e-12;53!UBERON:0001950;3.95e-12;20!UBERON:0000956;1.22e-11;25!UBERON:0000203;1.22e-11;25!UBERON:0001016;5.34e-10;83!UBERON:0000955;2.50e-09;68!UBERON:0000178;2.97e-09;15!UBERON:0000179;2.97e-09;15!UBERON:0000463;2.97e-09;15!UBERON:0001017;6.03e-09;75!UBERON:0007023;3.99e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.08e-27,114;UBERON:0001016,2.57e-24,89;UBERON:0001049,7.44e-23,56;UBERON:0005068,7.44e-23,56;UBERON:0006241,7.44e-23,56;UBERON:0007135,7.44e-23,56;UBERON:0001017,1.64e-21,81;UBERON:0000073,3.42e-21,53;UBERON:0002616,3.42e-21,53;UBERON:0002780,1.32e-19,41;UBERON:0001890,1.32e-19,41;UBERON:0003080,1.32e-19,41;UBERON:0006240,1.32e-19,41;UBERON:0000955,8.69e-19,68;UBERON:0006238,8.69e-19,68;UBERON:0003528,2.01e-16,34;UBERON:0002020,2.01e-16,34;UBERON:0001893,3.06e-16,34;UBERON:0002791,3.02e-15,32;UBERON:0001869,4.75e-15,32;UBERON:0002619,2.27e-13,22;UBERON:0003075,8.04e-13,82;UBERON:0007284,8.04e-13,82;UBERON:0002346,3.08e-12,86;UBERON:0001950,4.14e-12,20;UBERON:0000956,1.51e-11,25;UBERON:0000203,1.51e-11,25;UBERON:0003056,6.66e-11,61;UBERON:0000178,3.33e-09,15;UBERON:0000179,3.33e-09,15;UBERON:0000463,3.33e-09,15;UBERON:0010371,6.03e-09,104;UBERON:0004121,1.14e-08,171;UBERON:0000924,1.14e-08,171;UBERON:0006601,1.14e-08,171;UBERON:0011216,9.10e-08,223 | |||
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| ||
|short_description=p3@KIF2A | |||
}} | }} |
Latest revision as of 09:19, 18 September 2015
Short description: | p3@KIF2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIF2A_5end |
Coexpression cluster: | C1600_blood_Whole_optic_spinal_locus_globus_thalamus |
Association with transcript: | 0bp_to_ENST00000381103_5end |
EntrezGene: | KIF2A |
HGNC: | 6318 |
UniProt: | E9PB70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.46e-10 | 52 |
lymphocyte | 2.64e-10 | 53 |
common lymphoid progenitor | 2.64e-10 | 53 |
T cell | 1.56e-08 | 25 |
pro-T cell | 1.56e-08 | 25 |
mature alpha-beta T cell | 3.68e-07 | 18 |
alpha-beta T cell | 3.68e-07 | 18 |
immature T cell | 3.68e-07 | 18 |
mature T cell | 3.68e-07 | 18 |
immature alpha-beta T cell | 3.68e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.76e-08 | 51 |
immune system cancer | 1.76e-08 | 51 |
leukemia | 5.36e-07 | 39 |