FFCP PHASE1:Hg19::chr7:26331652..26331663,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:26331652..26331663,+
|short_description=p7@SNX10
|description=CAGE_peak_7_at_SNX10_5end
|association_with_transcript=10bp_to_uc010kuu.2_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29887 | |EntrezGene=29887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14974 | |HGNC=14974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_uc010kuu.2_5end | |||
|cluster_id=chr7:26331652..26331663,+ | |||
|coexpression_cluster_id=C1644 | |||
|description=CAGE_peak_7_at_SNX10_5end | |||
|id=chr7:26331652..26331663,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.35e-32!42;CL:0000766!1.26e-29!76;CL:0000860!3.25e-29!45;CL:0002194!1.85e-25!63;CL:0000576!1.85e-25!63;CL:0000040!1.85e-25!63;CL:0000559!1.85e-25!63;CL:0000839!1.44e-24!70;CL:0002009!4.44e-24!65;CL:0000557!6.15e-24!71;CL:0000738!7.79e-20!140;CL:0000763!8.65e-18!112;CL:0000049!8.65e-18!112;CL:0002087!4.05e-17!119;CL:0002031!2.01e-16!124;CL:0000037!5.36e-15!172;CL:0000566!5.36e-15!172;CL:0002032!2.78e-14!165;CL:0000837!2.78e-14!165;CL:0000988!3.81e-14!182;CL:0002393!1.10e-07!9;CL:0002397!1.10e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.15e-52;33!CL:0002057;5.15e-52;33!CL:0000473;2.73e-40;39!CL:0000234;2.73e-40;39!CL:0000576;3.60e-32;48!CL:0000766;1.54e-23;69!CL:0000763;5.23e-11;100!CL:0002393;1.39e-09;6!CL:0002397;1.39e-09;6!CL:0000775;3.25e-09;3!CL:0000094;1.14e-08;8!CL:0000738;1.39e-07;136!CL:0002087;3.72e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.02e-60,42;CL:0002057,9.02e-60,42;CL:0000473,1.61e-57,48;CL:0000234,1.61e-57,48;CL:0000766,8.06e-50,72;CL:0002194,6.83e-44,59;CL:0000576,6.83e-44,59;CL:0000040,6.83e-44,59;CL:0000559,6.83e-44,59;CL:0002009,3.89e-42,61;CL:0000839,1.19e-40,66;CL:0000557,6.79e-40,67;CL:0000763,2.13e-29,108;CL:0000049,2.13e-29,108;CL:0000738,3.25e-22,136;CL:0002031,4.84e-19,120;CL:0002087,5.53e-19,115;CL:0002032,5.26e-17,161;CL:0000837,5.26e-17,161;CL:0000037,7.84e-16,168;CL:0000988,1.82e-14,177;CL:0000775,3.62e-09,3;CL:0000094,1.04e-08,8;CL:0000771,9.09e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-42;42!CL:0000049;3.71e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.49e-30!102;UBERON:0003061!8.49e-30!102;UBERON:0002193!2.14e-26!112;UBERON:0002371!6.12e-21!80;UBERON:0001474!1.27e-19!86;UBERON:0007023!2.57e-17!115;UBERON:0002405!3.04e-16!115;UBERON:0001049!1.93e-15!57;UBERON:0005068!1.93e-15!57;UBERON:0006241!1.93e-15!57;UBERON:0007135!1.93e-15!57;UBERON:0004765!2.44e-15!101;UBERON:0001434!2.44e-15!101;UBERON:0002616!1.77e-11!59;UBERON:0002020!4.25e-11!34;UBERON:0003528!4.25e-11!34;UBERON:0001017!5.69e-11!82;UBERON:0001893!7.36e-11!34;UBERON:0002780!7.64e-11!41;UBERON:0001890!7.64e-11!41;UBERON:0006240!7.64e-11!41;UBERON:0002619!1.01e-10!22;UBERON:0000955!1.35e-10!69;UBERON:0006238!1.35e-10!69;UBERON:0003080!2.30e-10!42;UBERON:0005743!2.47e-10!86;UBERON:0001869!3.73e-10!32;UBERON:0002791!3.77e-10!33;UBERON:0000178!1.00e-09!15;UBERON:0000179!1.00e-09!15;UBERON:0000463!1.00e-09!15;UBERON:0003075!1.04e-09!86;UBERON:0007284!1.04e-09!86;UBERON:0000073!1.33e-09!94;UBERON:0001016!1.33e-09!94;UBERON:0000956!1.34e-09!25;UBERON:0000203!1.34e-09!25;UBERON:0001950!2.84e-09!20;UBERON:0002346!1.12e-08!90;UBERON:0003056!4.77e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.33e-17;22!UBERON:0000956;3.65e-15;25!UBERON:0000203;3.65e-15;25!UBERON:0001950;2.46e-14;20!UBERON:0003528;1.62e-13;34!UBERON:0002020;1.62e-13;34!UBERON:0001869;1.80e-13;32!UBERON:0001893;4.01e-12;34!UBERON:0002791;5.87e-12;32!UBERON:0000200;5.48e-10;6!UBERON:0000178;8.27e-10;15!UBERON:0000179;8.27e-10;15!UBERON:0000463;8.27e-10;15!UBERON:0000073;3.46e-08;53!UBERON:0002616;3.46e-08;53!UBERON:0002780;4.02e-08;41!UBERON:0001890;4.02e-08;41!UBERON:0000988;4.18e-08;3!UBERON:0001870;5.89e-08;3!UBERON:0000349;5.99e-08;5 | |||
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| ||
|short_description=p7@SNX10 | |||
}} | }} |
Latest revision as of 23:30, 17 September 2015
Short description: | p7@SNX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SNX10_5end |
Coexpression cluster: | C1644_Neutrophils_Eosinophils_medial_amygdala_frontal_paracentral_insula |
Association with transcript: | 10bp_to_uc010kuu.2_5end |
EntrezGene: | SNX10 |
HGNC: | 14974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.02e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.02e-60 | 42 |
defensive cell | 1.61e-57 | 48 |
phagocyte | 1.61e-57 | 48 |
myeloid leukocyte | 8.06e-50 | 72 |
monopoietic cell | 6.83e-44 | 59 |
monocyte | 6.83e-44 | 59 |
monoblast | 6.83e-44 | 59 |
promonocyte | 6.83e-44 | 59 |
macrophage dendritic cell progenitor | 3.89e-42 | 61 |
myeloid lineage restricted progenitor cell | 1.19e-40 | 66 |
granulocyte monocyte progenitor cell | 6.79e-40 | 67 |
myeloid cell | 2.13e-29 | 108 |
common myeloid progenitor | 2.13e-29 | 108 |
leukocyte | 3.25e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 4.84e-19 | 120 |
nongranular leukocyte | 5.53e-19 | 115 |
hematopoietic oligopotent progenitor cell | 5.26e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.26e-17 | 161 |
hematopoietic stem cell | 7.84e-16 | 168 |
hematopoietic cell | 1.82e-14 | 177 |
neutrophil | 3.62e-09 | 3 |
granulocyte | 1.04e-08 | 8 |
eosinophil | 9.09e-07 | 2 |