FFCP PHASE1:Hg19::chr7:69063408..69063445,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:69063408..69063445,+
|short_description=p1@AUTS2
|description=CAGE_peak_1_at_AUTS2_5end
|association_with_transcript=-459bp_to_ENST00000406775,NM_001127231...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26053 | |EntrezGene=26053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14262 | |HGNC=14262 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WD8,Q8WXX7 | |UniProt=Q86WD8,Q8WXX7 | ||
|association_with_transcript=-459bp_to_ENST00000406775,NM_001127231,uc003tvv.3,uc003tvw.3,uc003tvx.3_5end | |||
|cluster_id=chr7:69063408..69063445,+ | |||
|coexpression_cluster_id=C2901 | |||
|description=CAGE_peak_1_at_AUTS2_5end | |||
|id=chr7:69063408..69063445,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.59e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.22e-29!94;UBERON:0001016!4.22e-29!94;UBERON:0001017!1.65e-28!82;UBERON:0005743!4.11e-28!86;UBERON:0001049!3.00e-26!57;UBERON:0005068!3.00e-26!57;UBERON:0006241!3.00e-26!57;UBERON:0007135!3.00e-26!57;UBERON:0000955!1.41e-25!69;UBERON:0006238!1.41e-25!69;UBERON:0002346!4.34e-24!90;UBERON:0002616!1.37e-23!59;UBERON:0003075!1.98e-23!86;UBERON:0007284!1.98e-23!86;UBERON:0007023!1.26e-21!115;UBERON:0003080!8.21e-21!42;UBERON:0002780!1.65e-20!41;UBERON:0001890!1.65e-20!41;UBERON:0006240!1.65e-20!41;UBERON:0001893!3.06e-20!34;UBERON:0002020!6.91e-20!34;UBERON:0003528!6.91e-20!34;UBERON:0002791!9.96e-20!33;UBERON:0001869!2.37e-19!32;UBERON:0003056!4.57e-18!61;UBERON:0000924!5.31e-17!173;UBERON:0006601!5.31e-17!173;UBERON:0004121!2.65e-16!169;UBERON:0000956!6.47e-16!25;UBERON:0000203!6.47e-16!25;UBERON:0000153!1.85e-15!129;UBERON:0007811!1.85e-15!129;UBERON:0002619!1.22e-14!22;UBERON:0000033!2.43e-14!123;UBERON:0001950!2.04e-13!20;UBERON:0000064!9.73e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.59e-20;32!UBERON:0002791;3.40e-20;32!UBERON:0001893;3.55e-20;34!UBERON:0003528;4.64e-20;34!UBERON:0002020;4.64e-20;34!UBERON:0000956;2.69e-18;25!UBERON:0000203;2.69e-18;25!UBERON:0002780;2.41e-17;41!UBERON:0001890;2.41e-17;41!UBERON:0002619;8.60e-17;22!UBERON:0000073;1.46e-16;53!UBERON:0002616;1.46e-16;53!UBERON:0001950;2.35e-15;20!UBERON:0000955;4.12e-13;68!UBERON:0001016;7.68e-13;83!UBERON:0001017;7.87e-13;75!UBERON:0007023;1.36e-07;114!UBERON:0002420;9.13e-07;9!UBERON:0007245;9.13e-07;9!UBERON:0010009;9.13e-07;9!UBERON:0010011;9.13e-07;9!UBERON:0000454;9.13e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.98e-32,89;UBERON:0001017,3.48e-30,81;UBERON:0001049,7.74e-29,56;UBERON:0005068,7.74e-29,56;UBERON:0006241,7.74e-29,56;UBERON:0007135,7.74e-29,56;UBERON:0000073,1.13e-27,53;UBERON:0002616,1.13e-27,53;UBERON:0000955,5.37e-27,68;UBERON:0006238,5.37e-27,68;UBERON:0002346,6.19e-26,86;UBERON:0003075,2.49e-25,82;UBERON:0007284,2.49e-25,82;UBERON:0001893,3.22e-23,34;UBERON:0003528,8.28e-23,34;UBERON:0002020,8.28e-23,34;UBERON:0002780,1.57e-22,41;UBERON:0001890,1.57e-22,41;UBERON:0003080,1.57e-22,41;UBERON:0006240,1.57e-22,41;UBERON:0001869,3.47e-22,32;UBERON:0002791,5.24e-22,32;UBERON:0007023,2.57e-21,114;UBERON:0003056,7.30e-20,61;UBERON:0010371,2.41e-18,104;UBERON:0000956,3.36e-18,25;UBERON:0000203,3.36e-18,25;UBERON:0004121,1.32e-17,171;UBERON:0000924,1.32e-17,171;UBERON:0006601,1.32e-17,171;UBERON:0002619,1.01e-16,22;UBERON:0010314,2.02e-16,132;UBERON:0001950,2.65e-15,20;UBERON:0011216,1.99e-12,223;UBERON:0003076,1.67e-07,15;UBERON:0003057,1.67e-07,15 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.845726424575827,1.0007329835313,1.78784437770915,0,0,0,0.261185628199839,0.245733936501509,0,1.09220686065086,2.11013582582763,0.123766352960047,1.32558950291166,0.672325146451775,0,0,0.487932798790507,2.83178433576612,2.65200898617529,1.25381888591235,5.15224776835902,4.65373045247806,5.39833350257652,3.43860325865781,2.38091709404843,1.96776953284198,0,0.383829398097213,1.08371286321253,0,0,0,9.14112966847559,5.40243083452202,3.22960483268332,0,0.802177789880567,0.217010870715852,0.671746422719773,0.32389366601898,0.257575567634187,0.872389432677388,0.377875943688809,0.485168122375632,0.697287110717054,0.822335776043652,0,2.01384674625505,0.768482119587302,0.945928919554341,0.689491361473237,0.645484683583826,1.35426486594342,0.752969358170419,0.545812300115692,0,1.22433556948361,0.641858054152187,0.639337125799041,0.659702600373432,0.598390972864896,0,0.870627715885752,1.13477044938228,1.86846674698672,0.502497330513487,1.5644487552606,0.65156653411535,0,1.10483290796269,0.949387162322653,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,1.20118796110804,0.574752439954483,0,0,1.1384259382189,2.34894875748376,2.6759125968766,5.28685314316103,2.80254281490768,7.63813845847723,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0.802320587350522,0,0,0,0.639312809217652,0.722878304769133,0.50133791063589,0.434539556882471,0.795285947051099,0,6.05022829850034,3.32594096193846,6.58760892698445,5.17367348215965,0,0,0,0,0,9.06264372360299,5.71994910780128,11.8866400425461,0,0,0,0,0,0,0,1.29208379584664,0.71153252537342,1.33888245105868,0,0,0,0,0,2.41109266367015,3.36794058939255,3.37834441449967,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,2.25095607382472,2.0078563452417,0,0.560677600142307,2.1349799145941,0.24666754841716,3.11211035399766,1.21239604862719,2.12500474047496,1.36221684880438,1.72852777344,0.70296429550139,0,0,0.298897361103602,1.05691048779388,2.42809416552197,1.26405726032024,0.408308342509787,1.10550885580591,0.619954687054593,0,0.741800787835671,0,0,1.5150250255866,2.50237039743928,0,0,0.30648779579902,1.20190447125277,0.340296549480063,2.87023417102179,1.2813443329114,1.27159140695737,3.60109315301283,1.03052529238439,2.31876486041066,1.11670113798954,8.10126394758078,0.974370051611986,4.54380793639406,1.28869858099219,3.71785930683267,4.61512470271599,1.5112814734146,0,0,0,0.286804595389004,1.21973706129595,0.397589304964456,1.2781333715647,2.69518743039963,1.26160425437814,1.45990943630332,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0,0,0,0.269662616320329,0,0,0,1.40241773803446,0,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0.122988438543114,1.20097467208968,0.109750285408626,0,0,0,1.3032332212413,0,0,4.05756417412769,1.76113041353732,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,4.56121854189699,4.61183850934277,2.90357596880674,1.20645999155121,0.763976851116555,2.34434894420094,0,1.02827492703324,0,1.42913216315289,0.560655421726804,2.61576041299968,0.07333828582095,0.517086863031111,3.57656445851882,0.845302752556,0.26593811658487,0,1.54324424557285,0,0,0.142977993658148,0,0,0.977208552881205,0.355391948742546,0,1.50719688529793,0.871533458600294,2.89921674427965,0,0,0,0.239624855491583,1.14861935834114,4.27910715122155,1.15825045334063,0.821905290201534,0.716243852959582,4.81966119172167,0.788123040807709,0.431255149719035,0.256686072559497,3.30323011489202,10.4111883086097,5.41302168944387,5.36052049069916,4.46557126157214,0,0,0,0.49076596687656,0,0.542530047399471,1.03985430765404,0.535286966391485,0.473107245101804,0.585707074963566,1.20378439891088,0,0,1.32845119707087,1.10621501125022,0,1.76221041716467,1.37257369524342,0.82707210449155,0.862856803274467,0.213455115606889,1.21251028578504,1.66435439510497,3.93107381328584,1.48864684691266,5.37116906508219,1.40330047216537,1.28139149255701,2.55853624533352,1.76939313257968,1.48418066444991,0.308419387605311,0.710246901252508,0.246381468041427,1.55776328755086,0.697262270759755,0,0,0,0,0,0.131124414959424,0.902399225814824,0.0770153371044148,3.92174884588428,0,0.949964660035881,0,1.19065593693561,0.215915916102139,0,0.270946437543853,0.501689773854853,0.509752546090077,0,1.11937377361089,0,0,0.769350375349168,2.62411716559765,0,2.26690225624989,3.57120912791539,3.30037999682352,0.574265537996172,0,0,1.64340221096607,1.54048617114644,1.68854042198743,2.61889487720608,2.68550612170684,4.0604674295984,3.83519823372454,1.86967274858148,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0.429374660225974,0.372158369359667,0.632758849437452,0.190630193923825,0,0.42793898803392,0.95460974377781,0,1.61885211824983,1.92175920815238,1.88499843753098,0.202182481573316,0,0,0,0,0,0,0,1.13008116620243,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0.202910376962704,0.619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| ||
|short_description=p1@AUTS2 | |||
}} | }} |
Latest revision as of 07:38, 19 September 2015
Short description: | p1@AUTS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AUTS2_5end |
Coexpression cluster: | C2901_occipital_parietal_temporal_duodenum_non_brain_granulocyte |
Association with transcript: | -459bp_to_ENST00000406775, NM_001127231, uc003tvv.3, uc003tvw.3, uc003tvx.3_5end |
EntrezGene: | AUTS2 |
HGNC: | 14262 |
UniProt: | Q86WD8Q8WXX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data