FFCP PHASE1:Hg19::chr11:70672728..70672738,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-83bp_to_ENST00000423696_5end | |||
|cluster_id=chr11:70672728..70672738,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_17_at_SHANK2_5end | |||
|id=chr11:70672728..70672738,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.30e-45!86;UBERON:0001017!7.14e-45!82;UBERON:0002619!6.55e-43!22;UBERON:0001950!5.14e-42!20;UBERON:0001893!1.55e-41!34;UBERON:0001869!2.41e-40!32;UBERON:0000073!4.52e-40!94;UBERON:0001016!4.52e-40!94;UBERON:0002791!1.16e-38!33;UBERON:0000956!1.91e-37!25;UBERON:0000203!1.91e-37!25;UBERON:0000955!3.51e-36!69;UBERON:0006238!3.51e-36!69;UBERON:0001049!5.20e-36!57;UBERON:0005068!5.20e-36!57;UBERON:0006241!5.20e-36!57;UBERON:0007135!5.20e-36!57;UBERON:0002020!8.21e-34!34;UBERON:0003528!8.21e-34!34;UBERON:0002780!1.11e-33!41;UBERON:0001890!1.11e-33!41;UBERON:0006240!1.11e-33!41;UBERON:0003080!9.07e-33!42;UBERON:0002616!8.09e-32!59;UBERON:0003075!6.37e-30!86;UBERON:0007284!6.37e-30!86;UBERON:0007023!2.84e-29!115;UBERON:0002346!2.87e-28!90;UBERON:0003056!1.60e-25!61;UBERON:0000033!1.35e-23!123;UBERON:0000153!3.90e-22!129;UBERON:0007811!3.90e-22!129;UBERON:0001871!6.84e-22!7;UBERON:0004121!1.96e-21!169;UBERON:0000924!9.74e-21!173;UBERON:0006601!9.74e-21!173;UBERON:0000200!6.12e-15!6;UBERON:0001872!2.21e-12!5;UBERON:0002771!4.44e-11!3;UBERON:0000064!6.29e-09!219;UBERON:0002360!6.17e-08!2;UBERON:0000094!6.17e-08!2;UBERON:0007645!6.17e-08!2;UBERON:0000025!1.09e-07!194;UBERON:0000477!1.40e-07!286;UBERON:0000475!1.51e-07!365;UBERON:0004111!1.68e-07!241;UBERON:0002021!2.58e-07!5;UBERON:0000349!4.38e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.92e-46;20!UBERON:0002619;8.44e-42;22!UBERON:0000956;5.56e-37;25!UBERON:0000203;5.56e-37;25!UBERON:0002791;1.83e-26;32!UBERON:0001869;2.50e-26;32!UBERON:0001871;5.08e-26;6!UBERON:0003528;6.79e-26;34!UBERON:0002020;6.79e-26;34!UBERON:0001893;1.50e-22;34!UBERON:0002022;5.71e-21;1!UBERON:0002780;2.44e-18;41!UBERON:0001890;2.44e-18;41!UBERON:0000922;5.19e-13;49!UBERON:0000073;1.12e-11;53!UBERON:0002616;1.12e-11;53!UBERON:0000955;2.37e-10;68!UBERON:0001016;9.00e-10;83!UBERON:0001017;4.51e-08;75!UBERON:0001870;7.02e-08;3!UBERON:0002114;7.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.24e-46,20;UBERON:0002619,8.70e-42,22;UBERON:0000956,5.72e-37,25;UBERON:0000203,5.72e-37,25;UBERON:0002791,3.99e-29,32;UBERON:0001869,3.99e-29,32;UBERON:0003528,1.85e-27,34;UBERON:0002020,1.85e-27,34;UBERON:0001893,1.85e-27,34;UBERON:0001871,4.47e-26,6;UBERON:0002780,7.17e-23,41;UBERON:0001890,7.17e-23,41;UBERON:0003080,7.17e-23,41;UBERON:0006240,7.17e-23,41;UBERON:0002022,4.22e-21,1;UBERON:0001017,6.01e-19,81;UBERON:0000955,7.92e-18,68;UBERON:0006238,7.92e-18,68;UBERON:0000073,9.21e-18,53;UBERON:0002616,9.21e-18,53;UBERON:0001016,4.64e-17,89;UBERON:0001049,8.08e-17,56;UBERON:0005068,8.08e-17,56;UBERON:0006241,8.08e-17,56;UBERON:0007135,8.08e-17,56;UBERON:0003056,1.89e-15,61;UBERON:0003075,1.74e-11,82;UBERON:0007284,1.74e-11,82;UBERON:0002346,6.03e-11,86;UBERON:0010371,5.07e-09,104;UBERON:0004121,8.33e-09,171;UBERON:0000924,8.33e-09,171;UBERON:0006601,8.33e-09,171;UBERON:0011216,2.87e-08,223;UBERON:0002114,6.78e-08,2;UBERON:0001870,8.29e-08,3;UBERON:0010314,4.73e-07,132 | |||
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|short_description=p17@SHANK2 | |||
}} |
Latest revision as of 23:24, 19 September 2015
Short description: | p17@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SHANK2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -83bp_to_ENST00000423696_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data