FFCP PHASE1:Hg19::chr12:109458699..109458709,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55530 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25417 | |||
|TSSclassifier=strong | |||
|UniProt=F8VNW2,Q8N4V2 | |||
|association_with_transcript=135bp_to_ENST00000550046,ENST00000550490,ENST00000551429,NM_018711,uc010sxh.1_5end | |||
|cluster_id=chr12:109458699..109458709,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_SVOP_5end | |||
|id=chr12:109458699..109458709,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.24e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.41e-77!57;UBERON:0005068!1.41e-77!57;UBERON:0006241!1.41e-77!57;UBERON:0007135!1.41e-77!57;UBERON:0002616!2.27e-70!59;UBERON:0002780!1.10e-69!41;UBERON:0001890!1.10e-69!41;UBERON:0006240!1.10e-69!41;UBERON:0005743!3.02e-68!86;UBERON:0001017!3.50e-68!82;UBERON:0003080!6.70e-68!42;UBERON:0000073!7.95e-68!94;UBERON:0001016!7.95e-68!94;UBERON:0000955!6.55e-66!69;UBERON:0006238!6.55e-66!69;UBERON:0003075!6.48e-62!86;UBERON:0007284!6.48e-62!86;UBERON:0002346!8.37e-59!90;UBERON:0001893!7.46e-57!34;UBERON:0002020!1.65e-56!34;UBERON:0003528!1.65e-56!34;UBERON:0001869!1.31e-55!32;UBERON:0002791!2.83e-53!33;UBERON:0003056!6.03e-52!61;UBERON:0002619!1.04e-48!22;UBERON:0001950!1.11e-47!20;UBERON:0007023!6.46e-45!115;UBERON:0000956!1.37e-42!25;UBERON:0000203!1.37e-42!25;UBERON:0000033!2.77e-38!123;UBERON:0000153!3.96e-36!129;UBERON:0007811!3.96e-36!129;UBERON:0004121!3.47e-34!169;UBERON:0000924!3.39e-33!173;UBERON:0006601!3.39e-33!173;UBERON:0001871!1.10e-24!7;UBERON:0000025!7.43e-20!194;UBERON:0000200!8.36e-18!6;UBERON:0002420!2.29e-15!9;UBERON:0007245!2.29e-15!9;UBERON:0010009!2.29e-15!9;UBERON:0010011!2.29e-15!9;UBERON:0000454!2.29e-15!9;UBERON:0002308!4.69e-15!9;UBERON:0000125!4.69e-15!9;UBERON:0004111!2.40e-14!241;UBERON:0001894!7.11e-14!7;UBERON:0006222!7.11e-14!7;UBERON:0001872!7.39e-14!5;UBERON:0000483!9.47e-14!309;UBERON:0000119!1.58e-13!312;UBERON:0002771!2.15e-13!3;UBERON:0000349!4.05e-13!5;UBERON:0000064!2.62e-12!219;UBERON:0000988!3.58e-12!3;UBERON:0003076!8.05e-12!15;UBERON:0003057!8.05e-12!15;UBERON:0000477!1.12e-11!286;UBERON:0004733!3.32e-11!12;UBERON:0002028!3.32e-11!12;UBERON:0007277!3.32e-11!12;UBERON:0002680!9.66e-11!9;UBERON:0001895!9.66e-11!9;UBERON:0010092!9.66e-11!9;UBERON:0004732!2.70e-10!13;UBERON:0000475!3.57e-10!365;UBERON:0003296!1.02e-09!4;UBERON:0010133!1.02e-09!4;UBERON:0000369!1.11e-09!4;UBERON:0002435!1.11e-09!4;UBERON:0000204!1.11e-09!4;UBERON:0010082!1.11e-09!4;UBERON:0009663!3.16e-09!7;UBERON:0001876!5.26e-09!2;UBERON:0001873!6.43e-09!2;UBERON:0010122!6.43e-09!2;UBERON:0000007!6.96e-09!2;UBERON:0002360!7.54e-09!2;UBERON:0000094!7.54e-09!2;UBERON:0007645!7.54e-09!2;UBERON:0002148!1.59e-08!2;UBERON:0009662!1.59e-08!2;UBERON:0002021!3.46e-08!5;UBERON:0002298!7.09e-08!8;UBERON:0000481!2.19e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.71e-66;20!UBERON:0002619;5.76e-60;22!UBERON:0000956;6.52e-53;25!UBERON:0000203;6.52e-53;25!UBERON:0001893;1.71e-49;34!UBERON:0001869;1.77e-49;32!UBERON:0000200;1.64e-48;6!UBERON:0002791;4.18e-41;32!UBERON:0003528;3.75e-40;34!UBERON:0002020;3.75e-40;34!UBERON:0002780;1.32e-32;41!UBERON:0001890;1.32e-32;41!UBERON:0002771;3.33e-24;2!UBERON:0001872;1.58e-21;5!UBERON:0000073;4.13e-20;53!UBERON:0002616;4.13e-20;53!UBERON:0001870;1.74e-16;3!UBERON:0000955;3.64e-16;68!UBERON:0001017;4.89e-16;75!UBERON:0001871;9.41e-16;6!UBERON:0002902;1.93e-13;1!UBERON:0002022;1.93e-13;1!UBERON:0009899;1.93e-13;1!UBERON:0007190;1.93e-13;1!UBERON:0002581;5.37e-13;1!UBERON:0001882;5.37e-13;1!UBERON:0005403;5.37e-13;1!UBERON:0001016;1.08e-11;83!UBERON:0002021;1.90e-10;5!UBERON:0007023;1.28e-07;114!UBERON:0001905;3.92e-07;2!UBERON:0002360;3.92e-07;2!UBERON:0002702;3.92e-07;2!UBERON:0002757;3.92e-07;2!UBERON:0010134;3.92e-07;2!UBERON:0000094;3.92e-07;2!UBERON:0006955;3.92e-07;2!UBERON:0005408;3.92e-07;2!UBERON:0004801;3.92e-07;2!UBERON:0001899;3.92e-07;2!UBERON:0010743;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.86e-66,20;UBERON:0002619,4.01e-60,22;UBERON:0001869,3.39e-58,32;UBERON:0001893,8.67e-55,34;UBERON:0000956,4.74e-53,25;UBERON:0000203,4.74e-53,25;UBERON:0002780,9.23e-53,41;UBERON:0001890,9.23e-53,41;UBERON:0003080,9.23e-53,41;UBERON:0006240,9.23e-53,41;UBERON:0002791,2.24e-49,32;UBERON:0000200,1.91e-48,6;UBERON:0003528,1.78e-46,34;UBERON:0002020,1.78e-46,34;UBERON:0000073,1.10e-40,53;UBERON:0002616,1.10e-40,53;UBERON:0001049,1.85e-38,56;UBERON:0005068,1.85e-38,56;UBERON:0006241,1.85e-38,56;UBERON:0007135,1.85e-38,56;UBERON:0000955,8.41e-36,68;UBERON:0006238,8.41e-36,68;UBERON:0003056,3.17e-35,61;UBERON:0001017,3.32e-34,81;UBERON:0001016,1.10e-30,89;UBERON:0003075,6.90e-26,82;UBERON:0007284,6.90e-26,82;UBERON:0002346,1.28e-24,86;UBERON:0002771,4.76e-24,2;UBERON:0001872,8.40e-22,5;UBERON:0007023,2.66e-21,114;UBERON:0010371,4.25e-20,104;UBERON:0001870,1.27e-16,3;UBERON:0001871,1.12e-15,6;UBERON:0010314,1.74e-15,132;UBERON:0004121,2.49e-15,171;UBERON:0000924,2.49e-15,171;UBERON:0006601,2.49e-15,171;UBERON:0002902,1.61e-13,1;UBERON:0009899,1.61e-13,1;UBERON:0007190,1.82e-13,1;UBERON:0002022,2.32e-13,1;UBERON:0002581,3.76e-13,1;UBERON:0001882,9.73e-13,1;UBERON:0005403,9.73e-13,1;UBERON:0011216,2.82e-11,223;UBERON:0002021,2.04e-10,5;UBERON:0000025,4.40e-10,192;UBERON:0004111,1.11e-07,240;UBERON:0001905,3.93e-07,2;UBERON:0002757,3.93e-07,2;UBERON:0010134,3.93e-07,2;UBERON:0005408,3.93e-07,2;UBERON:0001899,3.93e-07,2;UBERON:0002360,4.17e-07,2;UBERON:0000094,4.17e-07,2;UBERON:0010743,4.17e-07,2;UBERON:0002702,4.42e-07,2;UBERON:0006955,5.60e-07,2;UBERON:0004801,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,1.94813006139888,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.241192877250816,0,0.995213339381022,0.591095237907095,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96263467463224,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0.137539436597234,0,0,0,2.18698403968889,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22026264901963,1.251909307065,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,1.09189682663981,0,0.638535436228605,1.23069818544453,0,2.6971328461045,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.566428215499,1.56215619722769,0.620060389503552,1.71222687523548,0,0,0,0,0,0,1.3451348888753,0.606965604236632,0.455324382702595,0,0,0,0.611727596791485,1.57854656550838,0,0,0,0,0,0,0,0,0.571812353413251,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.603851374266694,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37970215668201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@SVOP | |||
}} |
Latest revision as of 05:59, 16 September 2015
Short description: | p6@SVOP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SVOP_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 135bp_to_ENST00000550046, ENST00000550490, ENST00000551429, NM_018711, uc010sxh.1_5end |
EntrezGene: | SVOP |
HGNC: | 25417 |
UniProt: | F8VNW2Q8N4V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.60e-07 | 2 |