FFCP PHASE1:Hg19::chr13:98795361..98795384,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3591 | |||
|TSSclassifier=strong | |||
|UniProt=E9PCB0,C9JME2,Q5JVI9,Q9Y4F1 | |||
|association_with_transcript=-49bp_to_ENST00000376581,ENST00000376584,ENST00000376586,NM_001001715,NM_005766,uc001vni.2,uc001vnj.2_5end | |||
|cluster_id=chr13:98795361..98795384,+ | |||
|description=CAGE_peak_2_at_FARP1_5end | |||
|id=chr13:98795361..98795384,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.83e-15!180;CL:0002321!5.00e-13!248;CL:0000220!8.90e-13!246;CL:1000449!6.45e-09!16;CL:1000497!9.52e-09!18;CL:0002518!9.52e-09!18;CL:1000507!1.67e-07!12;CL:1000494!1.67e-07!12;CL:0000133!1.81e-07!59;CL:0002681!3.89e-07!13;CL:0002584!3.89e-07!13;CL:0000333!5.04e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.28e-09;15!CL:1000497;2.58e-09;17!CL:0002518;2.58e-09;17!CL:1000507;5.90e-08;10!CL:1000494;5.90e-08;10!CL:0002681;8.91e-08;12!CL:0002584;8.91e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.20e-12,250;CL:1000449,1.33e-09,15;CL:1000497,2.36e-09,17;CL:0002518,2.36e-09,17;CL:1000507,6.63e-08,10;CL:1000494,6.63e-08,10;CL:0002681,8.77e-08,12;CL:0002584,8.77e-08,12;CL:0000133,2.17e-07,59;CL:0000057,6.30e-07,76;CL:0000333,6.36e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.82e-23!365;UBERON:0000119!3.36e-23!312;UBERON:0000483!1.96e-22!309;UBERON:0000481!2.81e-22!347;UBERON:0000477!7.38e-17!286;UBERON:0004111!2.74e-15!241;UBERON:0000025!1.30e-14!194;UBERON:0005256!1.39e-14!143;UBERON:0000468!4.52e-14!659;UBERON:0002100!1.69e-13!216;UBERON:0000064!5.77e-13!219;UBERON:0003104!3.30e-12!238;UBERON:0009142!3.30e-12!238;UBERON:0000467!2.17e-11!625;UBERON:0005172!2.32e-11!55;UBERON:0005173!2.32e-11!55;UBERON:0000480!4.12e-11!626;UBERON:0002417!4.69e-11!61;UBERON:0000916!4.69e-11!61;UBERON:0005177!6.58e-11!107;UBERON:0000922!8.63e-11!612;UBERON:0000466!2.03e-10!126;UBERON:0004121!4.31e-10!169;UBERON:0009569!9.05e-10!113;UBERON:0000924!9.08e-10!173;UBERON:0006601!9.08e-10!173;UBERON:0002050!9.44e-10!605;UBERON:0005423!9.44e-10!605;UBERON:0000490!1.35e-09!138;UBERON:0001008!1.46e-09!45;UBERON:0000923!1.56e-09!604;UBERON:0005291!1.56e-09!604;UBERON:0006598!1.56e-09!604;UBERON:0002532!1.56e-09!604;UBERON:0003914!1.75e-09!118;UBERON:0003064!2.13e-09!37;UBERON:0006554!2.14e-09!44;UBERON:0000073!3.35e-09!94;UBERON:0001016!3.35e-09!94;UBERON:0004876!6.28e-09!20;UBERON:0006555!6.31e-09!17;UBERON:0005103!6.31e-09!17;UBERON:0000083!6.31e-09!17;UBERON:0009201!6.31e-09!17;UBERON:0004819!6.31e-09!17;UBERON:0006553!6.31e-09!17;UBERON:0003074!6.31e-09!17;UBERON:0003060!6.31e-09!17;UBERON:0004211!6.45e-09!16;UBERON:0001285!6.45e-09!16;UBERON:0007684!6.45e-09!16;UBERON:0003220!6.45e-09!16;UBERON:0004208!6.45e-09!16;UBERON:0000353!7.14e-09!17;UBERON:0000080!7.76e-09!18;UBERON:0002120!7.76e-09!18;UBERON:0004875!7.76e-09!18;UBERON:0005721!7.76e-09!18;UBERON:0005754!7.76e-09!18;UBERON:0007297!7.76e-09!18;UBERON:0000058!2.28e-08!26;UBERON:0000489!4.42e-08!32;UBERON:0003887!7.62e-08!21;UBERON:0003075!9.29e-08!86;UBERON:0007284!9.29e-08!86;UBERON:0005743!1.00e-07!86;UBERON:0001017!1.25e-07!82;UBERON:0009773!1.67e-07!12;UBERON:0001231!1.67e-07!12;UBERON:0004810!1.67e-07!12;UBERON:0002113!1.67e-07!27;UBERON:0003918!1.67e-07!27;UBERON:0005095!1.67e-07!27;UBERON:0007687!1.67e-07!27;UBERON:0002346!2.55e-07!90;UBERON:0000033!3.40e-07!123;UBERON:0001225!3.89e-07!13;UBERON:0008987!3.89e-07!13;UBERON:0002107!5.90e-07!19;UBERON:0006925!5.90e-07!19;UBERON:0008836!5.90e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.28e-09;15!UBERON:0004819;1.28e-09;15!UBERON:0001285;1.28e-09;15!UBERON:0007684;1.28e-09;15!UBERON:0000353;7.04e-09;15!UBERON:0006554;2.01e-08;30!UBERON:0001008;2.01e-08;30!UBERON:0000489;2.89e-08;29!UBERON:0004211;5.90e-08;10!UBERON:0009773;5.90e-08;10!UBERON:0001231;5.90e-08;10!UBERON:0004810;5.90e-08;10!UBERON:0001225;8.91e-08;12!UBERON:0008987;8.91e-08;12!UBERON:0002113;1.33e-07;24!UBERON:0011143;1.33e-07;24!UBERON:0005172;1.42e-07;52!UBERON:0005173;1.42e-07;52!UBERON:0002107;4.70e-07;19!UBERON:0006925;4.70e-07;19!UBERON:0002417;9.06e-07;58!UBERON:0000916;9.06e-07;58!UBERON:0001851;9.37e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.41e-22,309;UBERON:0000483,1.93e-21,306;UBERON:0003104,7.58e-16,160;UBERON:0009142,7.58e-16,160;UBERON:0004111,6.97e-15,240;UBERON:0000025,4.04e-14,192;UBERON:0011216,7.51e-14,223;UBERON:0002100,3.40e-12,199;UBERON:0005172,1.39e-11,54;UBERON:0005173,1.39e-11,54;UBERON:0002417,2.96e-11,60;UBERON:0000916,2.96e-11,60;UBERON:0005256,1.00e-10,122;UBERON:0005177,1.15e-10,101;UBERON:0000490,5.63e-10,148;UBERON:0009569,7.35e-10,112;UBERON:0004211,1.33e-09,15;UBERON:0009773,1.33e-09,15;UBERON:0001231,1.33e-09,15;UBERON:0001285,1.33e-09,15;UBERON:0007684,1.33e-09,15;UBERON:0004208,1.33e-09,15;UBERON:0006555,1.41e-09,16;UBERON:0004819,1.41e-09,16;UBERON:0003914,1.82e-09,117;UBERON:0000922,2.48e-09,592;UBERON:0004121,2.82e-09,171;UBERON:0000924,2.82e-09,171;UBERON:0006601,2.82e-09,171;UBERON:0000353,7.45e-09,15;UBERON:0005423,8.93e-09,581;UBERON:0001016,9.25e-09,89;UBERON:0010314,1.48e-08,132;UBERON:0000489,2.62e-08,31;UBERON:0001008,2.83e-08,48;UBERON:0003075,3.53e-08,82;UBERON:0007284,3.53e-08,82;UBERON:0006554,4.15e-08,47;UBERON:0004810,6.63e-08,10;UBERON:0001225,8.77e-08,12;UBERON:0008987,8.77e-08,12;UBERON:0002113,9.61e-08,26;UBERON:0003918,9.61e-08,26;UBERON:0011143,9.61e-08,26;UBERON:0005095,9.61e-08,26;UBERON:0007687,9.61e-08,26;UBERON:0002346,1.28e-07,86;UBERON:0001017,2.74e-07,81;UBERON:0002107,5.33e-07,19;UBERON:0006925,5.33e-07,19;UBERON:0008836,5.33e-07,19;UBERON:0004119,8.24e-07,160;UBERON:0000925,8.24e-07,160;UBERON:0006595,8.24e-07,160 | |||
|phase1_expression=2.36181893051724,2.5692062866918,1.55049844505568,5.00366491765652,4.46961094427288,1.74467704820074,5.06599756336621,4.42203911398782,3.91778442299758,12.7781646980785,21.6318362071453,6.334799791775,17.9361545195348,3.34169152992126,3.31397375727916,2.01697543935533,3.01347264011988,2.92124036154949,2.92759679274304,12.3121058076788,8.77202972350288,15.3592813524263,9.44578757532487,9.58120975510189,14.9395741117815,0.61130724598361,0.492603536699674,1.18066171970519,0,0,0,2.75826367343678,4.2168828628955,5.17655614233503,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,4.60305222636709,8.31310050484502,5.0133791063589,11.5877215168659,3.9764297352555,15.5723158496843,7.75185500745356,5.98669373148923,6.85111328406383,9.03755620934217,6.55731518926576,3.70784442784429,0,0.174129737299267,1.59549552622638,0,0,0,6.36039703573456,5.16140757063675,5.20710752411391,6.21838736116411,6.29249154314859,6.32771496462155,7.10582886225156,4.13466814670926,6.40379272836078,5.02080919147005,2.81980521976403,6.0821768457481,9.51842024437861,2.20597848207521,4.86085168729056,4.91148505562439,7.63399866928977,8.89630695818246,10.7321646226118,2.84779697870439,7.69447324507711,0,0,4.36094052142534,19.3819061161174,5.31848148991235,2.51577443545116,0.573673241497627,2.12801029319014,4.48542080113846,10.6748995729705,9.12669929143492,3.42332138939743,3.50247747381189,4.25000948094993,7.11379909931178,5.18558332031999,11.9503930235236,1.24864030732128,3.99330275081114,2.83952493048422,6.10659392947577,6.96053660782966,8.14614678873041,2.44985005505872,4.42203542322365,5.47626640231557,14.2560342873846,20.5231551301202,6.37112953356618,13.6537446945085,6.39677233025452,7.13175563270196,6.64953877162039,7.90159717585508,13.7919508109559,19.380709598951,3.17610112848059,3.7671823494661,23.704870158861,10.5965950579781,4.20127534518163,13.8090389179508,6.69865404118636,19.7283867711485,4.21940830603166,5.84622030967192,4.03894038790583,20.895326991802,4.84938170456436,4.9701342952326,11.9894996890892,12.8866050155971,1.93260853163297,0.272746120590835,0.860413786167011,5.12289565744301,8.34937540425357,6.9716365721711,8.50020651126038,4.03713361401005,4.37972830890996,9.38697193978896,16.0810234548221,15.1948413487729,2.78620756819187,1.44375896333917,2.24782920075703,2.36018566109342,1.92808823906786,2.64705534557745,3.7039505495709,3.55905928666645,2.56179485504312,1.56977172100277,3.07797725557112,8.11971000087113,23.8411015465858,10.289350283285,11.7606969108434,5.07020139287323,5.89696330006576,12.4065880403095,0,8.11723694384549,9.77936518701596,1.86575485194663,0,1.40740561376283,4.16648003213383,9.44844085399942,11.4392826380754,2.88662684050547,12.5204837373083,6.10525210026273,3.03169540298255,1.38895653772983,3.99533719692656,5.53143078571493,3.43394464837949,0.246217006087397,1.8720341211139,2.0808362720422,0,0.671928512795438,0,1.16426079513703,3.19697332365358,3.4504441124869,0,0,3.31724984865235,3.02651902175619,3.53478813593864,9.20719467236451,14.5155601712146,12.8939191931052,10.2643467613623,10.488404255739,8.40960561962969,19.4361974188793,9.86753542239174,15.2586024091648,4.62031200671985,8.27338980849778,25.0359512096318,4.22651376278,24.4663067258081,27.0419335969552,8.23063597638855,2.83698264046557,7.99266537048298,9.29356958777959,9.76718889704597,13.1718453884923,3.90883421152482,11.3725423597615,5.543663110534,3.31583314765545,4.35766729300147,6.89813639156194,1.2162378064119,0.502257091432126,0,9.34536936417172,21.8237678084816,4.27910715122155,2.02693829334611,1.43833425785268,3.40215830155802,0,0,0,0,7.6228387266739,14.3153839243384,3.86644406388848,5.02548796003046,7.65526501983796,0,0,0,5.64380861908043,5.50187573165645,3.7977103317963,8.94274704582471,7.31558854068363,2.83864347061082,4.4513737697231,8.72743689210385,4.5481500811197,5.17365356462525,8.63493278096067,16.5932251687533,10.512917350638,19.9717180611995,13.3825935286234,0,0,0,1.21251028578504,0,5.14063498660456,3.47350930946288,2.76231551918512,4.49056151092918,3.58789617915963,7.16390148693385,10.7772127166217,1.48418066444991,4.93471020168498,6.92490728721196,4.02423064467665,3.11552657510173,5.22946703069817,10.6356315640628,3.80962293576241,7.5506410927435,11.8258881609545,8.37619372830898,8.26083814244372,35.6447694196855,23.2586318055333,43.9235870739039,20.4594914514565,15.0938829316812,20.4720091327614,10.885997137697,7.34114114747274,7.71136263451447,17.6115184403504,32.1081455267106,18.6059679322878,32.4119643482202,22.3874754722178,0,0,4.61610225209501,4.92021968549559,3.90454073597164,5.46117361732928,5.67730681873729,4.86806049531469,14.9309039879005,8.45078319847478,9.64103579064957,7.54031602678551,3.23502095940753,4.29810289233163,4.68644346447404,5.15617175367713,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| |||
|short_description=p2@FARP1 | |||
}} |
Latest revision as of 07:09, 18 September 2015
Short description: | p2@FARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FARP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000376581, ENST00000376584, ENST00000376586, NM_001001715, NM_005766, uc001vni.2, uc001vnj.2_5end |
EntrezGene: | FARP1 |
HGNC: | 3591 |
UniProt: | E9PCB0C9JME2Q5JVI9Q9Y4F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.20e-12 | 250 |
epithelial cell of nephron | 1.33e-09 | 15 |
kidney cell | 2.36e-09 | 17 |
kidney epithelial cell | 2.36e-09 | 17 |
kidney tubule cell | 6.63e-08 | 10 |
nephron tubule epithelial cell | 6.63e-08 | 10 |
kidney cortical cell | 8.77e-08 | 12 |
renal cortical epithelial cell | 8.77e-08 | 12 |
neurectodermal cell | 2.17e-07 | 59 |
fibroblast | 6.30e-07 | 76 |
migratory neural crest cell | 6.36e-07 | 41 |