FFCP PHASE1:Hg19::chr17:32582293..32582312,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10618 | |||
|TSSclassifier=strong | |||
|UniProt=P13500 | |||
|association_with_transcript=0bp_to_ENST00000225831,NM_002982,uc002hhy.2_5end | |||
|cluster_id=chr17:32582293..32582312,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_1_at_CCL2_5end | |||
|id=chr17:32582293..32582312,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.57e-25!119;CL:0000680!7.58e-18!57;CL:0000056!7.58e-18!57;CL:0000355!7.58e-18!57;CL:0000187!1.38e-17!54;CL:0000393!2.88e-17!60;CL:0000211!2.88e-17!60;CL:0000055!1.82e-16!180;CL:0000183!1.98e-16!59;CL:0000359!1.69e-15!32;CL:0000192!2.17e-15!42;CL:0000514!2.17e-15!42;CL:0000213!1.22e-09!57;CL:0000215!1.22e-09!57;CL:0000048!1.73e-09!430;CL:0002494!2.45e-08!16;CL:0000723!2.79e-08!436;CL:0000115!4.70e-08!35;CL:0002057!6.18e-08!42;CL:0000034!9.93e-08!444;CL:0000220!1.01e-07!246;CL:0002139!1.14e-07!24;CL:0002321!1.67e-07!248;CL:0002078!1.71e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.57e-15;32!CL:0000473;1.01e-13;39!CL:0000234;1.01e-13;39!CL:0000860;6.54e-13;33!CL:0002057;6.54e-13;33!CL:0000192;4.37e-11;43!CL:0000187;1.58e-09;55!CL:0000393;9.55e-09;61!CL:0000211;9.55e-09;61!CL:0002494;2.00e-08;16!CL:0002139;9.53e-08;24!CL:0000115;4.46e-07;36!CL:0002539;9.42e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.34e-25,121;CL:0000680,1.45e-17,58;CL:0000056,1.45e-17,58;CL:0000355,1.45e-17,58;CL:0000187,2.75e-17,55;CL:0000393,1.42e-16,61;CL:0000211,1.42e-16,61;CL:0000359,1.13e-15,32;CL:0000192,5.08e-15,43;CL:0000514,5.08e-15,43;CL:0000473,4.26e-11,48;CL:0000234,4.26e-11,48;CL:0000048,2.64e-10,427;CL:0000213,7.41e-10,58;CL:0000215,7.41e-10,58;CL:0000723,6.12e-09,433;CL:0002494,2.01e-08,16;CL:0000034,2.23e-08,441;CL:0000115,3.94e-08,36;CL:0000860,4.23e-08,42;CL:0002057,4.23e-08,42;CL:0002139,9.52e-08,24;CL:0000839,9.73e-08,66;CL:0002194,1.15e-07,59;CL:0000576,1.15e-07,59;CL:0000040,1.15e-07,59;CL:0000559,1.15e-07,59;CL:0002078,1.24e-07,45;CL:0002321,1.93e-07,250;CL:0000557,2.46e-07,67;CL:0002009,4.51e-07,61;CL:0002539,9.46e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;4.37e-11;43!CL:0000355;2.35e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.16e-25!79;UBERON:0007798!1.16e-25!79;UBERON:0004872!5.55e-25!84;UBERON:0000055!1.88e-24!69;UBERON:0001009!7.44e-23!113;UBERON:0004535!2.40e-22!110;UBERON:0001981!1.12e-21!60;UBERON:0007500!1.12e-21!60;UBERON:0004537!1.12e-21!60;UBERON:0006965!1.12e-21!60;UBERON:0001637!9.29e-20!42;UBERON:0003509!9.29e-20!42;UBERON:0004572!9.29e-20!42;UBERON:0003081!5.34e-19!216;UBERON:0002204!1.23e-17!167;UBERON:0001134!3.35e-17!61;UBERON:0002036!3.35e-17!61;UBERON:0003082!3.35e-17!61;UBERON:0003914!3.41e-17!118;UBERON:0002385!3.59e-17!63;UBERON:0001015!3.59e-17!63;UBERON:0000383!3.59e-17!63;UBERON:0000467!3.78e-17!625;UBERON:0000480!5.11e-17!626;UBERON:0004573!5.44e-16!33;UBERON:0004571!5.44e-16!33;UBERON:0004290!7.75e-16!70;UBERON:0000468!8.24e-16!659;UBERON:0004111!1.48e-15!241;UBERON:0000477!2.33e-15!286;UBERON:0000025!5.23e-15!194;UBERON:0000914!9.21e-13!83;UBERON:0002329!9.21e-13!83;UBERON:0003077!9.21e-13!83;UBERON:0003059!9.21e-13!83;UBERON:0007282!9.21e-13!83;UBERON:0009618!9.21e-13!83;UBERON:0007285!9.21e-13!83;UBERON:0000923!2.16e-12!604;UBERON:0005291!2.16e-12!604;UBERON:0006598!2.16e-12!604;UBERON:0002532!2.16e-12!604;UBERON:0002050!2.18e-12!605;UBERON:0005423!2.18e-12!605;UBERON:0000922!3.68e-12!612;UBERON:0000486!7.56e-12!82;UBERON:0000483!9.95e-12!309;UBERON:0000119!1.33e-11!312;UBERON:0000490!5.85e-11!138;UBERON:0007100!3.92e-10!27;UBERON:0000926!7.15e-10!448;UBERON:0004120!7.15e-10!448;UBERON:0006603!7.15e-10!448;UBERON:0000948!7.85e-10!24;UBERON:0005498!7.85e-10!24;UBERON:0004140!7.85e-10!24;UBERON:0009881!7.85e-10!24;UBERON:0004141!7.85e-10!24;UBERON:0003084!7.85e-10!24;UBERON:0007005!7.85e-10!24;UBERON:0004139!7.85e-10!24;UBERON:0004291!7.85e-10!24;UBERON:0000947!3.36e-09!21;UBERON:0010191!3.36e-09!21;UBERON:0005256!1.09e-08!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.88e-15;33!UBERON:0004571;9.88e-15;33!UBERON:0001637;2.16e-14;42!UBERON:0003509;2.16e-14;42!UBERON:0004572;2.16e-14;42!UBERON:0000055;2.03e-11;65!UBERON:0007500;2.80e-11;56!UBERON:0001981;2.80e-11;56!UBERON:0004537;2.80e-11;56!UBERON:0002049;1.97e-10;75!UBERON:0007798;1.97e-10;75!UBERON:0007100;1.68e-09;25!UBERON:0000947;2.67e-09;21!UBERON:0010191;2.67e-09;21!UBERON:0000948;3.42e-09;22!UBERON:0003914;1.44e-07;74!UBERON:0002385;3.71e-07;31!UBERON:0001015;3.71e-07;31!UBERON:0000383;3.71e-07;31!UBERON:0004237;9.42e-07;10!UBERON:0004695;9.42e-07;10!UBERON:0002111;9.42e-07;10!UBERON:0004178;9.42e-07;10 | |||
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| |||
|short_description=p1@CCL2 | |||
}} |
Latest revision as of 13:32, 19 September 2015
Short description: | p1@CCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCL2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000225831, NM_002982, uc002hhy.2_5end |
EntrezGene: | CCL2 |
HGNC: | 10618 |
UniProt: | P13500 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data