FFCP PHASE1:Hg19::chr17:38256822..38256851,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9572 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7962 | |||
|TSSclassifier=strong | |||
|UniProt=F1D8S3,P20393 | |||
|association_with_transcript=121bp_to_NM_021724,uc002htz.1,uc010cwq.1_5end | |||
|cluster_id=chr17:38256822..38256851,- | |||
|coexpression_cluster_id=C2403 | |||
|description=CAGE_peak_1_at_NR1D1_5end | |||
|id=chr17:38256822..38256851,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.94e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-33!115;UBERON:0001049!4.66e-16!57;UBERON:0005068!4.66e-16!57;UBERON:0006241!4.66e-16!57;UBERON:0007135!4.66e-16!57;UBERON:0003080!2.74e-14!42;UBERON:0002780!1.10e-13!41;UBERON:0001890!1.10e-13!41;UBERON:0006240!1.10e-13!41;UBERON:0000955!3.58e-12!69;UBERON:0006238!3.58e-12!69;UBERON:0004111!9.89e-12!241;UBERON:0002616!2.50e-11!59;UBERON:0000480!3.17e-11!626;UBERON:0000062!3.83e-11!511;UBERON:0000467!3.95e-11!625;UBERON:0000475!8.78e-11!365;UBERON:0001893!1.79e-10!34;UBERON:0003075!2.49e-10!86;UBERON:0007284!2.49e-10!86;UBERON:0001017!2.53e-10!82;UBERON:0002020!4.26e-10!34;UBERON:0003528!4.26e-10!34;UBERON:0002791!5.53e-10!33;UBERON:0000468!5.63e-10!659;UBERON:0001869!5.67e-10!32;UBERON:0005743!5.80e-10!86;UBERON:0002619!5.88e-10!22;UBERON:0002346!7.03e-10!90;UBERON:0004121!2.44e-09!169;UBERON:0001950!2.75e-09!20;UBERON:0000033!3.39e-09!123;UBERON:0000073!3.68e-09!94;UBERON:0001016!3.68e-09!94;UBERON:0000153!3.84e-09!129;UBERON:0007811!3.84e-09!129;UBERON:0000924!4.00e-09!173;UBERON:0006601!4.00e-09!173;UBERON:0000025!3.28e-08!194;UBERON:0003056!5.13e-08!61;UBERON:0000956!4.06e-07!25;UBERON:0000203!4.06e-07!25;UBERON:0000477!4.86e-07!286;UBERON:0002050!1.00e-06!605;UBERON:0005423!1.00e-06!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.93e-10;22!UBERON:0002780;5.94e-10;41!UBERON:0001890;5.94e-10;41!UBERON:0001950;2.79e-09;20!UBERON:0007023;3.31e-09;114!UBERON:0001893;4.97e-09;34!UBERON:0001869;7.77e-09;32!UBERON:0002791;1.41e-08;32!UBERON:0000073;1.44e-08;53!UBERON:0002616;1.44e-08;53!UBERON:0003528;1.54e-08;34!UBERON:0002020;1.54e-08;34!UBERON:0000956;5.35e-07;25!UBERON:0000203;5.35e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.62e-33,114;UBERON:0001049,2.76e-15,56;UBERON:0005068,2.76e-15,56;UBERON:0006241,2.76e-15,56;UBERON:0007135,2.76e-15,56;UBERON:0000073,1.76e-14,53;UBERON:0002616,1.76e-14,53;UBERON:0002780,1.27e-13,41;UBERON:0001890,1.27e-13,41;UBERON:0003080,1.27e-13,41;UBERON:0006240,1.27e-13,41;UBERON:0000955,1.34e-11,68;UBERON:0006238,1.34e-11,68;UBERON:0004111,3.42e-11,240;UBERON:0001893,2.11e-10,34;UBERON:0003528,5.02e-10,34;UBERON:0002020,5.02e-10,34;UBERON:0002619,5.29e-10,22;UBERON:0001869,6.71e-10,32;UBERON:0010371,7.13e-10,104;UBERON:0003075,7.96e-10,82;UBERON:0007284,7.96e-10,82;UBERON:0001017,1.06e-09,81;UBERON:0002791,1.34e-09,32;UBERON:0001950,2.50e-09,20;UBERON:0002346,2.63e-09,86;UBERON:0001016,8.09e-09,89;UBERON:0004121,1.55e-08,171;UBERON:0000924,1.55e-08,171;UBERON:0006601,1.55e-08,171;UBERON:0011216,1.87e-08,223;UBERON:0010314,2.79e-08,132;UBERON:0000025,8.25e-08,192;UBERON:0003056,1.25e-07,61;UBERON:0000956,4.88e-07,25;UBERON:0000203,4.88e-07,25 | |||
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| |||
|short_description=p1@NR1D1 | |||
}} |
Latest revision as of 00:02, 20 September 2015
Short description: | p1@NR1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR1D1_5end |
Coexpression cluster: | C2403_skeletal_cervix_eye_cerebellum_dura_testicular_mature |
Association with transcript: | 121bp_to_NM_021724, uc002htz.1, uc010cwq.1_5end |
EntrezGene: | NR1D1 |
HGNC: | 7962 |
UniProt: | F1D8S3P20393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data