FFCP PHASE1:Hg19::chr20:6033140..6033181,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=267bp_to_AB527789_5end | |||
|cluster_id=chr20:6033140..6033181,- | |||
|description=CAGE_peak_1_at_AB527789_5end | |||
|id=chr20:6033140..6033181,- | |||
|ontology_enrichment_celltype=CL:1000497!6.62e-14!18;CL:0002518!6.62e-14!18;CL:1000449!7.08e-12!16;CL:0000066!1.94e-10!254;CL:1000507!6.94e-10!12;CL:1000494!6.94e-10!12;CL:0002681!1.03e-08!13;CL:0002584!1.03e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.73e-41;17!CL:0002518;5.73e-41;17!CL:1000449;3.86e-35;15!CL:1000507;3.76e-32;10!CL:1000494;3.76e-32;10!CL:0002681;6.77e-26;12!CL:0002584;6.77e-26;12!CL:1000746;1.64e-11;7!CL:1000612;1.64e-11;7!CL:0000239;3.78e-11;3!CL:1000615;3.78e-11;3!CL:0002306;3.78e-11;3!CL:1000415;5.25e-08;2!CL:0000650;2.27e-07;2!CL:1000500;2.27e-07;2!CL:1000618;2.27e-07;2!CL:1001318;2.27e-07;2!CL:0002173;2.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.58e-41,17;CL:0002518,3.58e-41,17;CL:1000449,2.64e-35,15;CL:1000507,2.88e-32,10;CL:1000494,2.88e-32,10;CL:0002681,4.96e-26,12;CL:0002584,4.96e-26,12;CL:0000066,1.45e-13,253;CL:1000746,1.23e-11,7;CL:1000612,1.23e-11,7;CL:0000239,5.49e-11,3;CL:1000615,5.49e-11,3;CL:0002306,5.49e-11,3;CL:1000415,4.07e-08,2;CL:0000650,1.78e-07,2;CL:1000500,1.78e-07,2;CL:1000618,1.78e-07,2;CL:1001318,1.78e-07,2;CL:0002173,1.78e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.52e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.17e-13!57;UBERON:0005068!2.17e-13!57;UBERON:0006241!2.17e-13!57;UBERON:0007135!2.17e-13!57;UBERON:0000025!3.95e-13!194;UBERON:0006555!1.32e-12!17;UBERON:0005103!1.32e-12!17;UBERON:0000083!1.32e-12!17;UBERON:0009201!1.32e-12!17;UBERON:0004819!1.32e-12!17;UBERON:0006553!1.32e-12!17;UBERON:0003074!1.32e-12!17;UBERON:0003060!1.32e-12!17;UBERON:0001869!2.97e-12!32;UBERON:0000489!5.08e-12!32;UBERON:0002020!5.21e-12!34;UBERON:0003528!5.21e-12!34;UBERON:0004211!7.08e-12!16;UBERON:0001285!7.08e-12!16;UBERON:0007684!7.08e-12!16;UBERON:0003220!7.08e-12!16;UBERON:0004208!7.08e-12!16;UBERON:0002616!1.10e-11!59;UBERON:0000080!1.28e-11!18;UBERON:0002120!1.28e-11!18;UBERON:0004875!1.28e-11!18;UBERON:0005721!1.28e-11!18;UBERON:0005754!1.28e-11!18;UBERON:0007297!1.28e-11!18;UBERON:0000058!1.33e-11!26;UBERON:0002113!2.52e-11!27;UBERON:0003918!2.52e-11!27;UBERON:0005095!2.52e-11!27;UBERON:0007687!2.52e-11!27;UBERON:0004111!2.71e-11!241;UBERON:0002780!2.93e-11!41;UBERON:0001890!2.93e-11!41;UBERON:0006240!2.93e-11!41;UBERON:0001893!4.07e-11!34;UBERON:0003075!5.52e-11!86;UBERON:0007284!5.52e-11!86;UBERON:0003080!8.42e-11!42;UBERON:0000481!1.22e-10!347;UBERON:0002791!1.47e-10!33;UBERON:0000483!2.29e-10!309;UBERON:0005743!3.00e-10!86;UBERON:0005172!3.71e-10!55;UBERON:0005173!3.71e-10!55;UBERON:0000475!4.43e-10!365;UBERON:0001017!4.55e-10!82;UBERON:0000119!5.24e-10!312;UBERON:0004876!5.86e-10!20;UBERON:0002346!6.07e-10!90;UBERON:0009773!6.94e-10!12;UBERON:0001231!6.94e-10!12;UBERON:0004810!6.94e-10!12;UBERON:0000955!8.69e-10!69;UBERON:0006238!8.69e-10!69;UBERON:0000466!2.17e-09!126;UBERON:0000064!2.18e-09!219;UBERON:0003887!2.98e-09!21;UBERON:0000073!3.12e-09!94;UBERON:0001016!3.12e-09!94;UBERON:0006554!3.17e-09!44;UBERON:0005177!5.23e-09!107;UBERON:0002417!7.15e-09!61;UBERON:0000916!7.15e-09!61;UBERON:0001008!7.52e-09!45;UBERON:0003064!9.75e-09!37;UBERON:0003056!9.75e-09!61;UBERON:0001225!1.03e-08!13;UBERON:0008987!1.03e-08!13;UBERON:0001950!1.21e-08!20;UBERON:0000477!1.92e-08!286;UBERON:0002619!1.92e-08!22;UBERON:0003886!1.96e-08!63;UBERON:0000062!2.87e-08!511;UBERON:0007023!3.24e-08!115;UBERON:0000033!3.33e-08!123;UBERON:0002420!4.08e-08!9;UBERON:0007245!4.08e-08!9;UBERON:0010009!4.08e-08!9;UBERON:0010011!4.08e-08!9;UBERON:0000454!4.08e-08!9;UBERON:0001851!5.85e-08!16;UBERON:0000464!1.05e-07!104;UBERON:0002308!2.20e-07!9;UBERON:0000125!2.20e-07!9;UBERON:0000353!2.73e-07!17;UBERON:0002553!3.08e-07!70;UBERON:0000153!3.17e-07!129;UBERON:0007811!3.17e-07!129;UBERON:0000956!6.24e-07!25;UBERON:0000203!6.24e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.86e-35;15!UBERON:0004819;3.86e-35;15!UBERON:0001285;3.86e-35;15!UBERON:0007684;3.86e-35;15!UBERON:0004211;3.76e-32;10!UBERON:0009773;3.76e-32;10!UBERON:0001231;3.76e-32;10!UBERON:0004810;3.76e-32;10!UBERON:0002113;1.04e-31;24!UBERON:0011143;1.04e-31;24!UBERON:0000489;7.60e-29;29!UBERON:0006554;9.80e-28;30!UBERON:0001008;9.80e-28;30!UBERON:0001225;6.77e-26;12!UBERON:0008987;6.77e-26;12!UBERON:0001851;2.06e-24;15!UBERON:0000353;2.06e-24;15!UBERON:0000369;3.57e-14;4!UBERON:0002435;3.57e-14;4!UBERON:0000204;3.57e-14;4!UBERON:0005172;3.02e-13;52!UBERON:0005173;3.02e-13;52!UBERON:0009663;6.25e-12;7!UBERON:0000074;1.64e-11;7!UBERON:0001229;1.64e-11;7!UBERON:0005383;3.53e-11;3!UBERON:0005382;3.53e-11;3!UBERON:0006853;3.78e-11;3!UBERON:0007685;3.78e-11;3!UBERON:0004134;3.78e-11;3!UBERON:0002417;1.03e-10;58!UBERON:0000916;1.03e-10;58!UBERON:0003350;6.28e-10;8!UBERON:0005177;2.44e-09;99!UBERON:0002420;3.39e-09;9!UBERON:0000125;3.39e-09;9!UBERON:0007245;3.39e-09;9!UBERON:0002308;3.39e-09;9!UBERON:0010009;3.39e-09;9!UBERON:0010011;3.39e-09;9!UBERON:0000454;3.39e-09;9!UBERON:0002294;2.66e-08;7!UBERON:0001173;2.66e-08;7!UBERON:0001873;5.52e-08;2!UBERON:0003929;1.15e-07;7!UBERON:0003567;2.27e-07;2!UBERON:0003838;2.27e-07;2!UBERON:0003586;2.27e-07;2!UBERON:0005169;2.27e-07;2!UBERON:0002321;2.27e-07;2!UBERON:0005215;2.27e-07;2!UBERON:0002303;2.27e-07;2!UBERON:0002319;2.27e-07;2!UBERON:0003103;5.03e-07;61 | |||
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| |||
|short_description=p1@AB527789 | |||
}} |
Latest revision as of 16:03, 28 July 2015
Short description: | p1@AB527789 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB527789_5end |
Coexpression cluster: | NA |
Association with transcript: | 267bp_to_AB527789_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.58e-41 | 17 |
kidney epithelial cell | 3.58e-41 | 17 |
epithelial cell of nephron | 2.64e-35 | 15 |
kidney tubule cell | 2.88e-32 | 10 |
nephron tubule epithelial cell | 2.88e-32 | 10 |
kidney cortical cell | 4.96e-26 | 12 |
renal cortical epithelial cell | 4.96e-26 | 12 |
epithelial cell | 1.45e-13 | 253 |
glomerular cell | 1.23e-11 | 7 |
kidney corpuscule cell | 1.23e-11 | 7 |
brush border epithelial cell | 5.49e-11 | 3 |
kidney cortex tubule cell | 5.49e-11 | 3 |
epithelial cell of proximal tubule | 5.49e-11 | 3 |
epithelial cell of gall bladder | 4.07e-08 | 2 |
mesangial cell | 1.78e-07 | 2 |
kidney interstitial cell | 1.78e-07 | 2 |
juxtaglomerular complex cell | 1.78e-07 | 2 |
renal interstitial pericyte | 1.78e-07 | 2 |
extraglomerular mesangial cell | 1.78e-07 | 2 |
Ontology term | p-value | n |
---|