FFCP PHASE1:Hg19::chr2:693380..693398,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:693380..693398,+ | |||
|description=CAGE_peak_at_chr2:693380..693398,+ | |||
|id=chr2:693380..693398,+ | |||
|ontology_enrichment_celltype=CL:1000449!1.28e-33!16;CL:1000507!9.55e-32!12;CL:1000494!9.55e-32!12;CL:1000497!1.45e-29!18;CL:0002518!1.45e-29!18;CL:0002681!2.23e-23!13;CL:0002584!2.23e-23!13;CL:0000239!1.76e-12!3;CL:1000615!1.76e-12!3;CL:0002306!1.76e-12!3;CL:1000612!1.90e-09!7;CL:1000746!1.90e-09!7;CL:1000487!6.06e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:1000507;9.03e-89;10!CL:1000494;9.03e-89;10!CL:1000449;1.29e-87;15!CL:1000497;3.60e-77;17!CL:0002518;3.60e-77;17!CL:0002681;5.77e-58;12!CL:0002584;5.77e-58;12!CL:1000746;8.70e-26;7!CL:1000612;8.70e-26;7!CL:0000650;7.15e-24;2!CL:1000500;7.15e-24;2!CL:1000618;7.15e-24;2!CL:1001318;7.15e-24;2!CL:0002173;7.15e-24;2!CL:0000239;9.79e-16;3!CL:1000615;9.79e-16;3!CL:0002306;9.79e-16;3!CL:0000669;1.97e-12;4!CL:0002188;1.06e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.34e-89,10;CL:1000494,6.34e-89,10;CL:1000449,1.05e-87,15;CL:1000497,3.01e-77,17;CL:0002518,3.01e-77,17;CL:0002681,4.80e-58,12;CL:0002584,4.80e-58,12;CL:1000746,9.89e-26,7;CL:1000612,9.89e-26,7;CL:0000650,8.02e-24,2;CL:1000500,8.02e-24,2;CL:1000618,8.02e-24,2;CL:1001318,8.02e-24,2;CL:0002173,8.02e-24,2;CL:0000239,8.44e-16,3;CL:1000615,8.44e-16,3;CL:0002306,8.44e-16,3;CL:0000669,2.08e-12,4;CL:0002188,1.11e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.99e-07;2 | |||
|ontology_enrichment_disease=DOID:0060072!7.85e-16!4;DOID:0060084!2.78e-12!3;DOID:127!2.78e-12!3 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.44e-12;1!DOID:3165;3.44e-12;1!DOID:0060121;3.44e-12;1!DOID:2438;3.44e-12;1!DOID:4418;3.44e-12;1!DOID:0060072;8.39e-12;4!DOID:1325;2.77e-07;7!DOID:3904;2.77e-07;7!DOID:3910;5.11e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.31e-12,1;DOID:3165,4.31e-12,1;DOID:0060121,4.31e-12,1;DOID:2438,4.31e-12,1;DOID:4418,4.31e-12,1;DOID:0060072,8.87e-12,4;DOID:1325,3.05e-07,7;DOID:3904,3.05e-07,7;DOID:3910,5.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0006555!4.07e-37!17;UBERON:0005103!4.07e-37!17;UBERON:0000083!4.07e-37!17;UBERON:0009201!4.07e-37!17;UBERON:0004819!4.07e-37!17;UBERON:0006553!4.07e-37!17;UBERON:0003074!4.07e-37!17;UBERON:0003060!4.07e-37!17;UBERON:0000080!7.08e-35!18;UBERON:0002120!7.08e-35!18;UBERON:0004875!7.08e-35!18;UBERON:0005721!7.08e-35!18;UBERON:0005754!7.08e-35!18;UBERON:0007297!7.08e-35!18;UBERON:0004211!1.28e-33!16;UBERON:0001285!1.28e-33!16;UBERON:0007684!1.28e-33!16;UBERON:0003220!1.28e-33!16;UBERON:0004208!1.28e-33!16;UBERON:0009773!9.55e-32!12;UBERON:0001231!9.55e-32!12;UBERON:0004810!9.55e-32!12;UBERON:0004876!4.55e-31!20;UBERON:0002113!9.87e-30!27;UBERON:0003918!9.87e-30!27;UBERON:0005095!9.87e-30!27;UBERON:0007687!9.87e-30!27;UBERON:0003887!1.95e-29!21;UBERON:0000058!4.35e-27!26;UBERON:0000489!1.73e-24!32;UBERON:0006554!3.23e-24!44;UBERON:0001008!1.42e-23!45;UBERON:0001225!2.23e-23!13;UBERON:0008987!2.23e-23!13;UBERON:0003064!3.94e-23!37;UBERON:0001851!1.18e-18!16;UBERON:0000353!1.88e-17!17;UBERON:0003886!1.93e-15!63;UBERON:0005172!1.58e-14!55;UBERON:0005173!1.58e-14!55;UBERON:0002553!1.88e-13!70;UBERON:0002417!1.03e-12!61;UBERON:0000916!1.03e-12!61;UBERON:0006853!1.76e-12!3;UBERON:0007685!1.76e-12!3;UBERON:0004134!1.76e-12!3;UBERON:0000464!6.14e-10!104;UBERON:0000074!1.90e-09!7;UBERON:0001229!1.90e-09!7;UBERON:0001230!1.90e-09!7;UBERON:0005749!1.90e-09!7;UBERON:0004199!1.90e-09!7;UBERON:0004209!1.90e-09!7;UBERON:0004198!1.90e-09!7;UBERON:0003103!2.13e-09!69;UBERON:0005156!5.40e-09!59;UBERON:0000990!5.40e-09!59;UBERON:0005177!1.36e-08!107;UBERON:0003586!1.01e-07!5;UBERON:0000466!2.13e-07!126;UBERON:0005256!2.15e-07!143;UBERON:0003133!3.83e-07!48;UBERON:0009569!5.85e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;9.03e-89;10!UBERON:0009773;9.03e-89;10!UBERON:0001231;9.03e-89;10!UBERON:0004810;9.03e-89;10!UBERON:0006555;1.29e-87;15!UBERON:0004819;1.29e-87;15!UBERON:0001285;1.29e-87;15!UBERON:0007684;1.29e-87;15!UBERON:0002113;9.21e-65;24!UBERON:0011143;9.21e-65;24!UBERON:0001225;5.77e-58;12!UBERON:0008987;5.77e-58;12!UBERON:0000489;2.37e-53;29!UBERON:0006554;1.59e-51;30!UBERON:0001008;1.59e-51;30!UBERON:0001851;3.04e-46;15!UBERON:0000353;3.04e-46;15!UBERON:0000074;8.70e-26;7!UBERON:0001229;8.70e-26;7!UBERON:0003567;7.15e-24;2!UBERON:0003838;7.15e-24;2!UBERON:0003586;7.15e-24;2!UBERON:0005169;7.15e-24;2!UBERON:0002321;7.15e-24;2!UBERON:0005215;7.15e-24;2!UBERON:0002303;7.15e-24;2!UBERON:0002319;7.15e-24;2!UBERON:0005172;7.37e-19;52!UBERON:0005173;7.37e-19;52!UBERON:0002417;7.33e-16;58!UBERON:0000916;7.33e-16;58!UBERON:0006853;9.79e-16;3!UBERON:0007685;9.79e-16;3!UBERON:0004134;9.79e-16;3!UBERON:0003103;3.28e-13;61!UBERON:0001301;1.66e-12;1!UBERON:0003891;1.97e-12;4!UBERON:0006834;3.44e-12;1!UBERON:0005177;4.58e-10;99!UBERON:0003914;8.84e-10;74!UBERON:0009569;2.36e-08;110!UBERON:0002100;1.44e-07;122!UBERON:0000025;1.51e-07;93!UBERON:0004903;5.11e-07;2!UBERON:0002173;5.11e-07;2!UBERON:0002186;5.11e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,3.60959690325929,1.92538342761037,3.13739907670742,8.76835347919564,3.79985864014353,0,0,2.37507507712353,1.54227252690289,15.7148933775435,8.02703638167765,0.509752546090077,1.66215201785745,5.1491193586101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,8.52408440419239,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.40618540333984,0,0,0,0,0,0.25426853765475,1.62899880526114,0.864221491201268,0.653174720218818,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20770274853339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,1.58913877437726,0,0,0,0 | |||
|short_description=p@chr2:693380..693398,+ | |||
}} |
Latest revision as of 11:43, 29 July 2015
Short description: | p@chr2:693380..693398, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:693380..693398, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.34e-89 | 10 |
nephron tubule epithelial cell | 6.34e-89 | 10 |
epithelial cell of nephron | 1.05e-87 | 15 |
kidney cell | 3.01e-77 | 17 |
kidney epithelial cell | 3.01e-77 | 17 |
kidney cortical cell | 4.80e-58 | 12 |
renal cortical epithelial cell | 4.80e-58 | 12 |
glomerular cell | 9.89e-26 | 7 |
kidney corpuscule cell | 9.89e-26 | 7 |
mesangial cell | 8.02e-24 | 2 |
kidney interstitial cell | 8.02e-24 | 2 |
juxtaglomerular complex cell | 8.02e-24 | 2 |
renal interstitial pericyte | 8.02e-24 | 2 |
extraglomerular mesangial cell | 8.02e-24 | 2 |
brush border epithelial cell | 8.44e-16 | 3 |
kidney cortex tubule cell | 8.44e-16 | 3 |
epithelial cell of proximal tubule | 8.44e-16 | 3 |
pericyte cell | 2.08e-12 | 4 |
glomerular endothelial cell | 1.11e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.31e-12 | 1 |
skin benign neoplasm | 4.31e-12 | 1 |
integumentary system benign neoplasm | 4.31e-12 | 1 |
dermis tumor | 4.31e-12 | 1 |
cutaneous fibrous histiocytoma | 4.31e-12 | 1 |