FFCP PHASE1:Mm9::chr11:54409631..54409657,+: Difference between revisions
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{{FFCP|EntrezGene=192786|HGNC=|MCL_coexpression_id=1|UniProt=Q3TKC6,Q3TPI6|association_with_transcript=0bp_to_ENSMUST00000149372,NM_001252497,NM_001252498,uc007iya.1,uc007iyb.1_5end|description=CAGE_peak_7_at_Rapgef6_5end|id=chr11:54409631..54409657,+|ontology_enrichment_celltype=CL:0000540!2.79e-16!33;CL:0000047!2.79e-16!33;CL:0000031!2.79e-16!33;CL:0000404!2.79e-16!33;CL:0000393!8.43e-12!39;CL:0000211!8.43e-12!39;CL:0000117!1.37e-11!23;CL:0000337!1.37e-11!23;CL:0002319!3.20e-10!43;CL:0000221!1.02e-09!44;CL:0000133!1.02e-09!44;CL:0000055!3.32e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,5.87e-14,33;CL:0000047,5.87e-14,33;CL:0000031,5.87e-14,33;CL:0000404,5.87e-14,33;CL:0000117,5.54e-11,23;CL:0000337,5.54e-11,23;CL:0000393,6.79e-11,39;CL:0000211,6.79e-11,39;CL:0002319,2.39e-09,43;CL:0000221,5.24e-09,44;CL:0000133,5.24e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.53e-23!73;UBERON:0005743!1.53e-23!73;UBERON:0000073!4.85e-23!75;UBERON:0001016!4.85e-23!75;UBERON:0002346!1.36e-21!71;UBERON:0003075!1.36e-21!71;UBERON:0007284!1.36e-21!71;UBERON:0004121!3.17e-21!102;UBERON:0000924!3.17e-21!102;UBERON:0006601!3.17e-21!102;UBERON:0001049!6.32e-17!52;UBERON:0005068!6.32e-17!52;UBERON:0006241!6.32e-17!52;UBERON:0007135!6.32e-17!52;UBERON:0000955!3.21e-15!50;UBERON:0006238!3.21e-15!50;UBERON:0002616!4.70e-15!49;UBERON:0000033!1.10e-14!63;UBERON:0002020!3.73e-14!34;UBERON:0003056!1.06e-11!49;UBERON:0003080!1.46e-11!40;UBERON:0002780!7.17e-11!39;UBERON:0001890!7.17e-11!39;UBERON:0006240!7.17e-11!39;UBERON:0002791!7.29e-11!29;UBERON:0003528!7.29e-11!29;UBERON:0001893!7.29e-11!29;UBERON:0007811!4.57e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.50e-24,73;UBERON:0001016,1.43e-23,75;UBERON:0000073,5.25e-21,54;UBERON:0001049,9.28e-19,52;UBERON:0005068,9.28e-19,52;UBERON:0006241,9.28e-19,52;UBERON:0007135,9.28e-19,52;UBERON:0004121,4.24e-16,95;UBERON:0000924,4.24e-16,95;UBERON:0006601,4.24e-16,95;UBERON:0002346,5.28e-16,64;UBERON:0003075,5.28e-16,64;UBERON:0007284,5.28e-16,64;UBERON:0002020,7.26e-16,34;UBERON:0002616,9.94e-14,46;UBERON:0000955,2.79e-13,47;UBERON:0006238,2.79e-13,47;UBERON:0010371,7.12e-13,73;UBERON:0010314,7.51e-13,92;UBERON:0003528,7.25e-12,29;UBERON:0002791,7.25e-12,29;UBERON:0001893,7.25e-12,29;UBERON:0003080,6.12e-11,40;UBERON:0002780,5.59e-10,39;UBERON:0001890,5.59e-10,39;UBERON:0006240,5.59e-10,39;UBERON:0002420,5.85e-10,8;UBERON:0007245,5.85e-10,8;UBERON:0010009,5.85e-10,8;UBERON:0010011,5.85e-10,8;UBERON:0000454,5.85e-10,8;UBERON:0003076,1.39e-09,12;UBERON:0003057,1.39e-09,12;UBERON:0002021,1.86e-08,10;UBERON:0000411,1.86e-08,10;UBERON:0001950,1.86e-08,10;UBERON:0003056,7.07e-08,49;UBERON:0002240,3.80e-07,6;UBERON:0005174,3.80e-07,6;UBERON:0001137,3.80e-07,6;UBERON:0000369,4.46e-07,5;UBERON:0002435,4.46e-07,5;UBERON:0000204,4.46e-07,5;UBERON:0010082,4.46e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.571301968807607,2.42955395046775,0.489963196859816,0.575072826109418,0.919218786610021,6.60695285996332,2.68143409978894,3.37934373163736,1.71452174049252,2.37867873366265,2.08365348222704,1.67509799400829,1.68828783009504,3.20876320331301,5.59794312399969,6.40672563595963,4.47358669980721,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,2.08182392119363,3.04465478312141,2.07553947530453,2.11011696773672,3.29248379979973,0,0,0.433798070759735,0,0,0,0,0,2.34224637609238,1.67557365450764,0,0,0,0,3.74476598512057,2.28750301409313,4.27224797183739,3.30266208365325,3.06858548796397,4.36354893575076,2.43361894601636,0,0,0,0,0.130120442962704,0,0.180062129805349,0.753524089178575,0.476255494059295,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,3.36463917702604,0.411618449517138,0,0,0,0.232236671860439,0.77320476793256,0.80673409849337,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0.685491075658373,0,0.407302655690628,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,5.50894926983355,0,0,0.94652465824877,2.34263246577983,2.15423397732799,0.238968797952552,2.00518806674155,1.41538265394416,2.83367491172426,0.876767573733936,1.97643888973262,0.321321316421807,0,0.178065603667255,0,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,0.658196082408484,0,0,0,0.441056796109924,0,0,0,0,0,0,5.00648315428376,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.972048067396211,0.627264888043406,0.218362563746178,0.404593039154462,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,4.60325236507177,1.71868654031819,2.92150409984269,0.685082519770642,0,2.70009000092722,3.15224842256954,3.17199686288943,2.07104124700728,1.97195960409936,2.79317411380722,1.36586884603307,0.972426868273176,0.419226325255965,0.919217542250071,1.33348036680969,2.06035057238894,1.92551525755089,1.01078884705519,2.02783439912192,1.88626341386076,1.87283014939765,1.85672941974121,1.83793500657962,0.952587382566147,1.15884325944855,0.38581844092741,1.23625770240992,1.91358596174717,0.685738504770831,1.4198064492747,1.90748951957857,2.0348498328526,1.12931256498397,0.592302255241736,0.914639864363863,0.526139422875686,1.7654534799962,0.561142271657738,0.711810108745045,0.591026894253381,0.409231043169689,0.929621047115796,0.578719832943424,0.499621155875892,1.40358965067245,0.214871054048298,0.57386499620653,0.220591419119515,0|short_description=p7@Rapgef6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192786 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TKC6,Q3TPI6 | |||
|association_with_transcript=0bp_to_ENSMUST00000149372,NM_001252497,NM_001252498,uc007iya.1,uc007iyb.1_5end | |||
|cluster_id=chr11:54409631..54409657,+ | |||
|description=CAGE_peak_7_at_Rapgef6_5end | |||
|id=chr11:54409631..54409657,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.79e-16!33;CL:0000047!2.79e-16!33;CL:0000031!2.79e-16!33;CL:0000404!2.79e-16!33;CL:0000393!8.43e-12!39;CL:0000211!8.43e-12!39;CL:0000117!1.37e-11!23;CL:0000337!1.37e-11!23;CL:0002319!3.20e-10!43;CL:0000221!1.02e-09!44;CL:0000133!1.02e-09!44;CL:0000055!3.32e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.87e-14,33;CL:0000047,5.87e-14,33;CL:0000031,5.87e-14,33;CL:0000404,5.87e-14,33;CL:0000117,5.54e-11,23;CL:0000337,5.54e-11,23;CL:0000393,6.79e-11,39;CL:0000211,6.79e-11,39;CL:0002319,2.39e-09,43;CL:0000221,5.24e-09,44;CL:0000133,5.24e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.53e-23!73;UBERON:0005743!1.53e-23!73;UBERON:0000073!4.85e-23!75;UBERON:0001016!4.85e-23!75;UBERON:0002346!1.36e-21!71;UBERON:0003075!1.36e-21!71;UBERON:0007284!1.36e-21!71;UBERON:0004121!3.17e-21!102;UBERON:0000924!3.17e-21!102;UBERON:0006601!3.17e-21!102;UBERON:0001049!6.32e-17!52;UBERON:0005068!6.32e-17!52;UBERON:0006241!6.32e-17!52;UBERON:0007135!6.32e-17!52;UBERON:0000955!3.21e-15!50;UBERON:0006238!3.21e-15!50;UBERON:0002616!4.70e-15!49;UBERON:0000033!1.10e-14!63;UBERON:0002020!3.73e-14!34;UBERON:0003056!1.06e-11!49;UBERON:0003080!1.46e-11!40;UBERON:0002780!7.17e-11!39;UBERON:0001890!7.17e-11!39;UBERON:0006240!7.17e-11!39;UBERON:0002791!7.29e-11!29;UBERON:0003528!7.29e-11!29;UBERON:0001893!7.29e-11!29;UBERON:0007811!4.57e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.50e-24,73;UBERON:0001016,1.43e-23,75;UBERON:0000073,5.25e-21,54;UBERON:0001049,9.28e-19,52;UBERON:0005068,9.28e-19,52;UBERON:0006241,9.28e-19,52;UBERON:0007135,9.28e-19,52;UBERON:0004121,4.24e-16,95;UBERON:0000924,4.24e-16,95;UBERON:0006601,4.24e-16,95;UBERON:0002346,5.28e-16,64;UBERON:0003075,5.28e-16,64;UBERON:0007284,5.28e-16,64;UBERON:0002020,7.26e-16,34;UBERON:0002616,9.94e-14,46;UBERON:0000955,2.79e-13,47;UBERON:0006238,2.79e-13,47;UBERON:0010371,7.12e-13,73;UBERON:0010314,7.51e-13,92;UBERON:0003528,7.25e-12,29;UBERON:0002791,7.25e-12,29;UBERON:0001893,7.25e-12,29;UBERON:0003080,6.12e-11,40;UBERON:0002780,5.59e-10,39;UBERON:0001890,5.59e-10,39;UBERON:0006240,5.59e-10,39;UBERON:0002420,5.85e-10,8;UBERON:0007245,5.85e-10,8;UBERON:0010009,5.85e-10,8;UBERON:0010011,5.85e-10,8;UBERON:0000454,5.85e-10,8;UBERON:0003076,1.39e-09,12;UBERON:0003057,1.39e-09,12;UBERON:0002021,1.86e-08,10;UBERON:0000411,1.86e-08,10;UBERON:0001950,1.86e-08,10;UBERON:0003056,7.07e-08,49;UBERON:0002240,3.80e-07,6;UBERON:0005174,3.80e-07,6;UBERON:0001137,3.80e-07,6;UBERON:0000369,4.46e-07,5;UBERON:0002435,4.46e-07,5;UBERON:0000204,4.46e-07,5;UBERON:0010082,4.46e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.571301968807607,2.42955395046775,0.489963196859816,0.575072826109418,0.919218786610021,6.60695285996332,2.68143409978894,3.37934373163736,1.71452174049252,2.37867873366265,2.08365348222704,1.67509799400829,1.68828783009504,3.20876320331301,5.59794312399969,6.40672563595963,4.47358669980721,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,2.08182392119363,3.04465478312141,2.07553947530453,2.11011696773672,3.29248379979973,0,0,0.433798070759735,0,0,0,0,0,2.34224637609238,1.67557365450764,0,0,0,0,3.74476598512057,2.28750301409313,4.27224797183739,3.30266208365325,3.06858548796397,4.36354893575076,2.43361894601636,0,0,0,0,0.130120442962704,0,0.180062129805349,0.753524089178575,0.476255494059295,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,3.36463917702604,0.411618449517138,0,0,0,0.232236671860439,0.77320476793256,0.80673409849337,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0.685491075658373,0,0.407302655690628,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81651769963376,5.50894926983355,0,0,0.94652465824877,2.34263246577983,2.15423397732799,0.238968797952552,2.00518806674155,1.41538265394416,2.83367491172426,0.876767573733936,1.97643888973262,0.321321316421807,0,0.178065603667255,0,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,0.658196082408484,0,0,0,0.441056796109924,0,0,0,0,0,0,5.00648315428376,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,0.609958401380546,0.972048067396211,0.627264888043406,0.218362563746178,0.404593039154462,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,4.60325236507177,1.71868654031819,2.92150409984269,0.685082519770642,0,2.70009000092722,3.15224842256954,3.17199686288943,2.07104124700728,1.97195960409936,2.79317411380722,1.36586884603307,0.972426868273176,0.419226325255965,0.919217542250071,1.33348036680969,2.06035057238894,1.92551525755089,1.01078884705519,2.02783439912192,1.88626341386076,1.87283014939765,1.85672941974121,1.83793500657962,0.952587382566147,1.15884325944855,0.38581844092741,1.23625770240992,1.91358596174717,0.685738504770831,1.4198064492747,1.90748951957857,2.0348498328526,1.12931256498397,0.592302255241736,0.914639864363863,0.526139422875686,1.7654534799962,0.561142271657738,0.711810108745045,0.591026894253381,0.409231043169689,0.929621047115796,0.578719832943424,0.499621155875892,1.40358965067245,0.214871054048298,0.57386499620653,0.220591419119515,0 | |||
|short_description=p7@Rapgef6 | |||
}} |
Latest revision as of 17:04, 1 October 2015
Short description: | p7@Rapgef6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rapgef6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000149372, NM_001252497, NM_001252498, uc007iya.1, uc007iyb.1_5end |
EntrezGene: | Rapgef6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.87e-14 | 33 |
neuronal stem cell | 5.87e-14 | 33 |
neuroblast | 5.87e-14 | 33 |
electrically signaling cell | 5.87e-14 | 33 |
CNS neuron (sensu Vertebrata) | 5.54e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.54e-11 | 23 |
electrically responsive cell | 6.79e-11 | 39 |
electrically active cell | 6.79e-11 | 39 |
neural cell | 2.39e-09 | 43 |
ectodermal cell | 5.24e-09 | 44 |
neurectodermal cell | 5.24e-09 | 44 |