FFCP PHASE1:Mm9::chr13:96902624..96902642,-: Difference between revisions
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{{FFCP|EntrezGene=75209|HGNC=|MCL_coexpression_id=464|UniProt=Q69ZS6|association_with_transcript=-92bp_to_ENSMUST00000161263,NM_029210,uc007rmt.2_5end|description=CAGE_peak_3_at_Sv2c_5end|id=chr13:96902624..96902642,-|ontology_enrichment_celltype=CL:0000117!2.08e-10!23;CL:0000337!2.08e-10!23;CL:0000540!7.04e-09!33;CL:0000047!7.04e-09!33;CL:0000031!7.04e-09!33;CL:0000404!7.04e-09!33;CL:0000221!5.57e-07!44;CL:0000133!5.57e-07!44;CL:0002319!8.57e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-24,23;CL:0000337,1.39e-24,23;CL:0000540,2.14e-16,33;CL:0000047,2.14e-16,33;CL:0000031,2.14e-16,33;CL:0000404,2.14e-16,33;CL:0002319,2.96e-16,43;CL:0000221,8.04e-16,44;CL:0000133,8.04e-16,44;CL:0000393,1.69e-13,39;CL:0000211,1.69e-13,39;CL:0002612,4.14e-12,3;CL:0002610,1.45e-11,3;CL:0002614,1.85e-11,3;CL:0002611,5.87e-09,2;CL:0002321,7.04e-09,70;CL:0000217,6.70e-08,2;CL:0000328,6.70e-08,2;CL:0002573,6.70e-08,2;CL:0002376,6.70e-08,2;CL:0000218,6.70e-08,2;CL:0000692,6.70e-08,2;CL:0002377,6.70e-08,2;CL:0002375,6.70e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.74e-16!75;UBERON:0001016!1.74e-16!75;UBERON:0004121!4.16e-16!102;UBERON:0000924!4.16e-16!102;UBERON:0006601!4.16e-16!102;UBERON:0001017!4.77e-15!73;UBERON:0005743!4.77e-15!73;UBERON:0002346!9.41e-14!71;UBERON:0003075!9.41e-14!71;UBERON:0007284!9.41e-14!71;UBERON:0001049!8.85e-13!52;UBERON:0005068!8.85e-13!52;UBERON:0006241!8.85e-13!52;UBERON:0007135!8.85e-13!52;UBERON:0000033!3.07e-11!63;UBERON:0000955!4.32e-11!50;UBERON:0006238!4.32e-11!50;UBERON:0002616!1.91e-10!49;UBERON:0002020!1.80e-08!34;UBERON:0003076!3.62e-08!12;UBERON:0003057!3.62e-08!12;UBERON:0003056!5.12e-08!49;UBERON:0002240!2.46e-07!6;UBERON:0005174!2.46e-07!6;UBERON:0001137!2.46e-07!6;UBERON:0003080!6.69e-07!40;UBERON:0002298!7.09e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.45e-26,75;UBERON:0003076,1.80e-24,12;UBERON:0003057,1.80e-24,12;UBERON:0000073,1.85e-23,54;UBERON:0002240,3.97e-23,6;UBERON:0005174,3.97e-23,6;UBERON:0001137,3.97e-23,6;UBERON:0001017,1.57e-22,73;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0001049,1.57e-19,52;UBERON:0005068,1.57e-19,52;UBERON:0006241,1.57e-19,52;UBERON:0007135,1.57e-19,52;UBERON:0001948,2.07e-19,5;UBERON:0002315,2.07e-19,5;UBERON:0002346,3.13e-15,64;UBERON:0003075,3.13e-15,64;UBERON:0007284,3.13e-15,64;UBERON:0002950,1.51e-14,4;UBERON:0001891,1.51e-14,4;UBERON:0009616,1.51e-14,4;UBERON:0010286,1.51e-14,4;UBERON:0010371,6.25e-13,73;UBERON:0002257,4.14e-12,3;UBERON:0004684,1.45e-11,3;UBERON:0002275,1.45e-11,3;UBERON:0002038,1.85e-11,3;UBERON:0009663,1.85e-11,3;UBERON:0009661,1.85e-11,3;UBERON:0000125,1.85e-11,3;UBERON:0002308,1.85e-11,3;UBERON:0002020,3.68e-11,34;UBERON:0002420,5.85e-11,8;UBERON:0007245,5.85e-11,8;UBERON:0010009,5.85e-11,8;UBERON:0010011,5.85e-11,8;UBERON:0000454,5.85e-11,8;UBERON:0000955,2.73e-10,47;UBERON:0006238,2.73e-10,47;UBERON:0010314,1.51e-09,92;UBERON:0002256,5.87e-09,2;UBERON:0002616,6.28e-09,46;UBERON:0001896,1.64e-08,2;UBERON:0002298,1.64e-08,2;UBERON:0005290,1.64e-08,2;UBERON:0010096,1.64e-08,2;UBERON:0011216,1.17e-07,194;UBERON:0000025,4.90e-07,114|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,14.2825492201902,11.0434270475807,0.244981598429908,0.191690942036473,0,2.20231761998777,4.46905683298157,7.21950706304344,0.395658863190582,1.28082701043374,0,10.0505879640497,1.12552522006336,5.34793867218835,9.72274332063103,9.25415925194169,5.40558392893372,2.57469057332826,1.73814588245607,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.753613202763113,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.585561594023094,1.67557365450764,0,0,0.599902730993408,0,1.9472783122627,3.20250421973039,0.753926112677186,0.173824320192276,0.511430914660661,2.49345653471472,2.59586020908412,0.203678727700633,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.12811372028485,0.187403449119458,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42202359951168,6.09500770279457,0,0,0,0,0,0.477937595905104,0.222798674082394,0.849229592366497,0.809621403349789,0,0,1.60660658210904,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.658196082408484,0.608929898229199,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,15.5757253688828,0,0,0,0,0,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0,0,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.367687016900028,0,0,0,0.505394423527595,0,0.377252682772152,0.468207537349412,0.512201219238954,0.631790158511746,0,0.579421629724277,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,0.532427418478012,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.474540072496697,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,0.999242311751784,0.233931608445408,0,0.382576664137687,0,0|short_description=p3@Sv2c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75209 | |||
|HGNC= | |||
|MCL_coexpression_id=464 | |||
|TSSclassifier=NA | |||
|UniProt=Q69ZS6 | |||
|association_with_transcript=-92bp_to_ENSMUST00000161263,NM_029210,uc007rmt.2_5end | |||
|cluster_id=chr13:96902624..96902642,- | |||
|description=CAGE_peak_3_at_Sv2c_5end | |||
|id=chr13:96902624..96902642,- | |||
|ontology_enrichment_celltype=CL:0000117!2.08e-10!23;CL:0000337!2.08e-10!23;CL:0000540!7.04e-09!33;CL:0000047!7.04e-09!33;CL:0000031!7.04e-09!33;CL:0000404!7.04e-09!33;CL:0000221!5.57e-07!44;CL:0000133!5.57e-07!44;CL:0002319!8.57e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-24,23;CL:0000337,1.39e-24,23;CL:0000540,2.14e-16,33;CL:0000047,2.14e-16,33;CL:0000031,2.14e-16,33;CL:0000404,2.14e-16,33;CL:0002319,2.96e-16,43;CL:0000221,8.04e-16,44;CL:0000133,8.04e-16,44;CL:0000393,1.69e-13,39;CL:0000211,1.69e-13,39;CL:0002612,4.14e-12,3;CL:0002610,1.45e-11,3;CL:0002614,1.85e-11,3;CL:0002611,5.87e-09,2;CL:0002321,7.04e-09,70;CL:0000217,6.70e-08,2;CL:0000328,6.70e-08,2;CL:0002573,6.70e-08,2;CL:0002376,6.70e-08,2;CL:0000218,6.70e-08,2;CL:0000692,6.70e-08,2;CL:0002377,6.70e-08,2;CL:0002375,6.70e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.74e-16!75;UBERON:0001016!1.74e-16!75;UBERON:0004121!4.16e-16!102;UBERON:0000924!4.16e-16!102;UBERON:0006601!4.16e-16!102;UBERON:0001017!4.77e-15!73;UBERON:0005743!4.77e-15!73;UBERON:0002346!9.41e-14!71;UBERON:0003075!9.41e-14!71;UBERON:0007284!9.41e-14!71;UBERON:0001049!8.85e-13!52;UBERON:0005068!8.85e-13!52;UBERON:0006241!8.85e-13!52;UBERON:0007135!8.85e-13!52;UBERON:0000033!3.07e-11!63;UBERON:0000955!4.32e-11!50;UBERON:0006238!4.32e-11!50;UBERON:0002616!1.91e-10!49;UBERON:0002020!1.80e-08!34;UBERON:0003076!3.62e-08!12;UBERON:0003057!3.62e-08!12;UBERON:0003056!5.12e-08!49;UBERON:0002240!2.46e-07!6;UBERON:0005174!2.46e-07!6;UBERON:0001137!2.46e-07!6;UBERON:0003080!6.69e-07!40;UBERON:0002298!7.09e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.45e-26,75;UBERON:0003076,1.80e-24,12;UBERON:0003057,1.80e-24,12;UBERON:0000073,1.85e-23,54;UBERON:0002240,3.97e-23,6;UBERON:0005174,3.97e-23,6;UBERON:0001137,3.97e-23,6;UBERON:0001017,1.57e-22,73;UBERON:0004121,5.77e-20,95;UBERON:0000924,5.77e-20,95;UBERON:0006601,5.77e-20,95;UBERON:0001049,1.57e-19,52;UBERON:0005068,1.57e-19,52;UBERON:0006241,1.57e-19,52;UBERON:0007135,1.57e-19,52;UBERON:0001948,2.07e-19,5;UBERON:0002315,2.07e-19,5;UBERON:0002346,3.13e-15,64;UBERON:0003075,3.13e-15,64;UBERON:0007284,3.13e-15,64;UBERON:0002950,1.51e-14,4;UBERON:0001891,1.51e-14,4;UBERON:0009616,1.51e-14,4;UBERON:0010286,1.51e-14,4;UBERON:0010371,6.25e-13,73;UBERON:0002257,4.14e-12,3;UBERON:0004684,1.45e-11,3;UBERON:0002275,1.45e-11,3;UBERON:0002038,1.85e-11,3;UBERON:0009663,1.85e-11,3;UBERON:0009661,1.85e-11,3;UBERON:0000125,1.85e-11,3;UBERON:0002308,1.85e-11,3;UBERON:0002020,3.68e-11,34;UBERON:0002420,5.85e-11,8;UBERON:0007245,5.85e-11,8;UBERON:0010009,5.85e-11,8;UBERON:0010011,5.85e-11,8;UBERON:0000454,5.85e-11,8;UBERON:0000955,2.73e-10,47;UBERON:0006238,2.73e-10,47;UBERON:0010314,1.51e-09,92;UBERON:0002256,5.87e-09,2;UBERON:0002616,6.28e-09,46;UBERON:0001896,1.64e-08,2;UBERON:0002298,1.64e-08,2;UBERON:0005290,1.64e-08,2;UBERON:0010096,1.64e-08,2;UBERON:0011216,1.17e-07,194;UBERON:0000025,4.90e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,14.2825492201902,11.0434270475807,0.244981598429908,0.191690942036473,0,2.20231761998777,4.46905683298157,7.21950706304344,0.395658863190582,1.28082701043374,0,10.0505879640497,1.12552522006336,5.34793867218835,9.72274332063103,9.25415925194169,5.40558392893372,2.57469057332826,1.73814588245607,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.753613202763113,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.585561594023094,1.67557365450764,0,0,0.599902730993408,0,1.9472783122627,3.20250421973039,0.753926112677186,0.173824320192276,0.511430914660661,2.49345653471472,2.59586020908412,0.203678727700633,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.12811372028485,0.187403449119458,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42202359951168,6.09500770279457,0,0,0,0,0,0.477937595905104,0.222798674082394,0.849229592366497,0.809621403349789,0,0,1.60660658210904,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.658196082408484,0.608929898229199,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,15.5757253688828,0,0,0,0,0,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0,0,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.367687016900028,0,0,0,0.505394423527595,0,0.377252682772152,0.468207537349412,0.512201219238954,0.631790158511746,0,0.579421629724277,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,0.532427418478012,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.474540072496697,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,0.999242311751784,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p3@Sv2c | |||
}} |
Latest revision as of 14:01, 25 September 2015
Short description: | p3@Sv2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sv2c_5end |
Coexpression cluster: | MCL_coexpression_mm9:464 |
Association with transcript: | -92bp_to_ENSMUST00000161263, NM_029210, uc007rmt.2_5end |
EntrezGene: | Sv2c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-24 | 23 |
neuron | 2.14e-16 | 33 |
neuronal stem cell | 2.14e-16 | 33 |
neuroblast | 2.14e-16 | 33 |
electrically signaling cell | 2.14e-16 | 33 |
neural cell | 2.96e-16 | 43 |
ectodermal cell | 8.04e-16 | 44 |
neurectodermal cell | 8.04e-16 | 44 |
electrically responsive cell | 1.69e-13 | 39 |
electrically active cell | 1.69e-13 | 39 |
neuron of the ventral spinal cord | 4.14e-12 | 3 |
raphe nuclei neuron | 1.45e-11 | 3 |
neuron of the substantia nigra | 1.85e-11 | 3 |
neuron of the dorsal spinal cord | 5.87e-09 | 2 |
embryonic cell | 7.04e-09 | 70 |
insulating cell | 6.70e-08 | 2 |
myelin accumulating cell | 6.70e-08 | 2 |
Schwann cell | 6.70e-08 | 2 |
non-myelinating Schwann cell | 6.70e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 6.70e-08 | 2 |
terminal Schwann cell | 6.70e-08 | 2 |
immature Schwann cell | 6.70e-08 | 2 |
Schwann cell precursor | 6.70e-08 | 2 |