FFCP PHASE1:Mm9::chr13:9764383..9764430,-: Difference between revisions
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{{FFCP|EntrezGene=66505|HGNC=|MCL_coexpression_id=1|UniProt=Q8BJZ0|association_with_transcript=0bp_to_ENSMUST00000062658_5end|description=CAGE_peak_2_at_Zmynd11_5end|id=chr13:9764383..9764430,-|ontology_enrichment_celltype=CL:0000117!4.08e-10!23;CL:0000337!4.08e-10!23;CL:0000540!8.46e-09!33;CL:0000047!8.46e-09!33;CL:0000031!8.46e-09!33;CL:0000404!8.46e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.94e-10,23;CL:0000337,3.94e-10,23;CL:0000540,8.22e-09,33;CL:0000047,8.22e-09,33;CL:0000031,8.22e-09,33;CL:0000404,8.22e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.25e-17!94;UBERON:0007811!4.41e-16!86;UBERON:0002020!3.97e-15!34;UBERON:0002791!2.07e-13!29;UBERON:0003528!2.07e-13!29;UBERON:0001893!2.07e-13!29;UBERON:0001049!5.43e-13!52;UBERON:0005068!5.43e-13!52;UBERON:0006241!5.43e-13!52;UBERON:0007135!5.43e-13!52;UBERON:0001017!9.30e-13!73;UBERON:0005743!9.30e-13!73;UBERON:0000073!1.15e-12!75;UBERON:0001016!1.15e-12!75;UBERON:0000955!1.66e-12!50;UBERON:0006238!1.66e-12!50;UBERON:0003056!2.10e-12!49;UBERON:0000033!2.83e-12!63;UBERON:0002616!6.32e-12!49;UBERON:0003080!1.48e-11!40;UBERON:0002346!1.92e-11!71;UBERON:0003075!1.92e-11!71;UBERON:0007284!1.92e-11!71;UBERON:0002780!3.59e-11!39;UBERON:0001890!3.59e-11!39;UBERON:0006240!3.59e-11!39;UBERON:0004121!5.05e-10!102;UBERON:0000924!5.05e-10!102;UBERON:0006601!5.05e-10!102;UBERON:0000956!5.27e-10!21;UBERON:0001869!5.27e-10!21;UBERON:0000203!5.27e-10!21;UBERON:0002619!4.29e-08!17;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10;UBERON:0000477!7.53e-08!154;UBERON:0000025!7.63e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.49e-15,34;UBERON:0010314,7.53e-15,92;UBERON:0000073,1.33e-13,54;UBERON:0002346,1.56e-13,64;UBERON:0003075,1.56e-13,64;UBERON:0007284,1.56e-13,64;UBERON:0003528,2.36e-13,29;UBERON:0002791,2.36e-13,29;UBERON:0001893,2.36e-13,29;UBERON:0001049,6.60e-13,52;UBERON:0005068,6.60e-13,52;UBERON:0006241,6.60e-13,52;UBERON:0007135,6.60e-13,52;UBERON:0001017,9.51e-13,73;UBERON:0001016,1.18e-12,75;UBERON:0003056,2.30e-12,49;UBERON:0000955,1.25e-11,47;UBERON:0006238,1.25e-11,47;UBERON:0010371,1.36e-11,73;UBERON:0003080,1.63e-11,40;UBERON:0004121,1.82e-11,95;UBERON:0000924,1.82e-11,95;UBERON:0006601,1.82e-11,95;UBERON:0002780,3.98e-11,39;UBERON:0001890,3.98e-11,39;UBERON:0006240,3.98e-11,39;UBERON:0002616,4.66e-11,46;UBERON:0000956,6.07e-10,21;UBERON:0001869,6.07e-10,21;UBERON:0000203,6.07e-10,21;UBERON:0002619,4.96e-08,17;UBERON:0002021,5.11e-08,10;UBERON:0000411,5.11e-08,10;UBERON:0001950,5.11e-08,10;UBERON:0000025,9.40e-07,114|phase1_expression=4.96461426024861,0,0,0,0,0.839396359559449,0.934450562382103,12.1375924035082,2.67498572088167,5.61754863172784,11.6428218393343,13.2421783932258,13.8672591244277,13.0256399604306,1.99865857089398,3.44207954562704,0.699561878128147,6.62470547252299,7.12995054749842,4.66828616977833,5.01755411891312,6.55320277925843,7.57479388502913,0.319984845586813,1.14704640533585,0,0.86152399231815,0.646413698057667,0.190023419456374,0.756090389279792,0.665191531965914,5.71527606113668,4.30545351309199,0,1.44425809875637,0.498703936075477,2.04169356262369,0.418531630736908,0,1.0470474879476,0,0.683045484958446,0.485510353031154,2.14024590558481,2.53442328048786,1.28482726513177,0.782391344348039,1.52617609466313,0.878744730937887,1.1665793944457,1.81982348112971,2.87505128729943,6.04017381807851,15.2326049822382,29.9123481236793,2.31533492432352,2.57880095944881,2.06268836910977,14.7691016427506,19.0436752537932,24.0855933332348,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,13.2722703754851,12.4205463265155,12.4091727197315,5.42736870367227,11.2642955885323,18.4961106814581,12.6516021744072,28.4957823849107,7.70811166995721,9.95961237064464,9.67721159514334,17.8046488435762,17.8400905024699,19.2737947106001,6.42120897703176,7.87867654044352,11.3070703354839,15.6153150301044,18.7930618654816,13.9799584368975,5.83091688665517,5.36558076758177,3.47837386442013,1.72084775396277,0,0.539703191637817,0.649776417447669,0.896053774194671,3.08977724289854,2.21559419351475,1.81850203222008,1.7666978725517,4.3661460130771,1.28326477414318,2.54805239706646,0,0.432982082022428,2.28023878927589,0.505524445014783,1.7127581957859,11.9111426477699,4.89859058913922,3.29622120855658,3.95805121805784,2.7673859670727,2.71300752994721,5.05631440683531,4.27266410520897,2.22475470960936,2.4581890676385,0.884610551949874,4.85300549842228,2.87093973998512,3.87900202508178,3.72783522436244,11.4184510834503,14.0329293565015,1.27728527604296,8.38705871541442,5.39912457894067,6.22644112658017,11.5338792341713,45.292559679044,39.7067752676652,25.0307021076878,28.640131220997,13.714010940931,22.5515355664183,4.3790926455636,4.22983700074316,7.07623723614289,4.62972082950243,6.76626303406059,5.9774547152703,5.94205028357652,9.19299388797862,7.62008790494872,10.6334387836425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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66505 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BJZ0 | |||
|association_with_transcript=0bp_to_ENSMUST00000062658_5end | |||
|cluster_id=chr13:9764383..9764430,- | |||
|description=CAGE_peak_2_at_Zmynd11_5end | |||
|id=chr13:9764383..9764430,- | |||
|ontology_enrichment_celltype=CL:0000117!4.08e-10!23;CL:0000337!4.08e-10!23;CL:0000540!8.46e-09!33;CL:0000047!8.46e-09!33;CL:0000031!8.46e-09!33;CL:0000404!8.46e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.94e-10,23;CL:0000337,3.94e-10,23;CL:0000540,8.22e-09,33;CL:0000047,8.22e-09,33;CL:0000031,8.22e-09,33;CL:0000404,8.22e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.25e-17!94;UBERON:0007811!4.41e-16!86;UBERON:0002020!3.97e-15!34;UBERON:0002791!2.07e-13!29;UBERON:0003528!2.07e-13!29;UBERON:0001893!2.07e-13!29;UBERON:0001049!5.43e-13!52;UBERON:0005068!5.43e-13!52;UBERON:0006241!5.43e-13!52;UBERON:0007135!5.43e-13!52;UBERON:0001017!9.30e-13!73;UBERON:0005743!9.30e-13!73;UBERON:0000073!1.15e-12!75;UBERON:0001016!1.15e-12!75;UBERON:0000955!1.66e-12!50;UBERON:0006238!1.66e-12!50;UBERON:0003056!2.10e-12!49;UBERON:0000033!2.83e-12!63;UBERON:0002616!6.32e-12!49;UBERON:0003080!1.48e-11!40;UBERON:0002346!1.92e-11!71;UBERON:0003075!1.92e-11!71;UBERON:0007284!1.92e-11!71;UBERON:0002780!3.59e-11!39;UBERON:0001890!3.59e-11!39;UBERON:0006240!3.59e-11!39;UBERON:0004121!5.05e-10!102;UBERON:0000924!5.05e-10!102;UBERON:0006601!5.05e-10!102;UBERON:0000956!5.27e-10!21;UBERON:0001869!5.27e-10!21;UBERON:0000203!5.27e-10!21;UBERON:0002619!4.29e-08!17;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10;UBERON:0000477!7.53e-08!154;UBERON:0000025!7.63e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.49e-15,34;UBERON:0010314,7.53e-15,92;UBERON:0000073,1.33e-13,54;UBERON:0002346,1.56e-13,64;UBERON:0003075,1.56e-13,64;UBERON:0007284,1.56e-13,64;UBERON:0003528,2.36e-13,29;UBERON:0002791,2.36e-13,29;UBERON:0001893,2.36e-13,29;UBERON:0001049,6.60e-13,52;UBERON:0005068,6.60e-13,52;UBERON:0006241,6.60e-13,52;UBERON:0007135,6.60e-13,52;UBERON:0001017,9.51e-13,73;UBERON:0001016,1.18e-12,75;UBERON:0003056,2.30e-12,49;UBERON:0000955,1.25e-11,47;UBERON:0006238,1.25e-11,47;UBERON:0010371,1.36e-11,73;UBERON:0003080,1.63e-11,40;UBERON:0004121,1.82e-11,95;UBERON:0000924,1.82e-11,95;UBERON:0006601,1.82e-11,95;UBERON:0002780,3.98e-11,39;UBERON:0001890,3.98e-11,39;UBERON:0006240,3.98e-11,39;UBERON:0002616,4.66e-11,46;UBERON:0000956,6.07e-10,21;UBERON:0001869,6.07e-10,21;UBERON:0000203,6.07e-10,21;UBERON:0002619,4.96e-08,17;UBERON:0002021,5.11e-08,10;UBERON:0000411,5.11e-08,10;UBERON:0001950,5.11e-08,10;UBERON:0000025,9.40e-07,114 | |||
|phase1_expression=4.96461426024861,0,0,0,0,0.839396359559449,0.934450562382103,12.1375924035082,2.67498572088167,5.61754863172784,11.6428218393343,13.2421783932258,13.8672591244277,13.0256399604306,1.99865857089398,3.44207954562704,0.699561878128147,6.62470547252299,7.12995054749842,4.66828616977833,5.01755411891312,6.55320277925843,7.57479388502913,0.319984845586813,1.14704640533585,0,0.86152399231815,0.646413698057667,0.190023419456374,0.756090389279792,0.665191531965914,5.71527606113668,4.30545351309199,0,1.44425809875637,0.498703936075477,2.04169356262369,0.418531630736908,0,1.0470474879476,0,0.683045484958446,0.485510353031154,2.14024590558481,2.53442328048786,1.28482726513177,0.782391344348039,1.52617609466313,0.878744730937887,1.1665793944457,1.81982348112971,2.87505128729943,6.04017381807851,15.2326049822382,29.9123481236793,2.31533492432352,2.57880095944881,2.06268836910977,14.7691016427506,19.0436752537932,24.0855933332348,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,13.2722703754851,12.4205463265155,12.4091727197315,5.42736870367227,11.2642955885323,18.4961106814581,12.6516021744072,28.4957823849107,7.70811166995721,9.95961237064464,9.67721159514334,17.8046488435762,17.8400905024699,19.2737947106001,6.42120897703176,7.87867654044352,11.3070703354839,15.6153150301044,18.7930618654816,13.9799584368975,5.83091688665517,5.36558076758177,3.47837386442013,1.72084775396277,0,0.539703191637817,0.649776417447669,0.896053774194671,3.08977724289854,2.21559419351475,1.81850203222008,1.7666978725517,4.3661460130771,1.28326477414318,2.54805239706646,0,0.432982082022428,2.28023878927589,0.505524445014783,1.7127581957859,11.9111426477699,4.89859058913922,3.29622120855658,3.95805121805784,2.7673859670727,2.71300752994721,5.05631440683531,4.27266410520897,2.22475470960936,2.4581890676385,0.884610551949874,4.85300549842228,2.87093973998512,3.87900202508178,3.72783522436244,11.4184510834503,14.0329293565015,1.27728527604296,8.38705871541442,5.39912457894067,6.22644112658017,11.5338792341713,45.292559679044,39.7067752676652,25.0307021076878,28.640131220997,13.714010940931,22.5515355664183,4.3790926455636,4.22983700074316,7.07623723614289,4.62972082950243,6.76626303406059,5.9774547152703,5.94205028357652,9.19299388797862,7.62008790494872,10.6334387836425,6.93392761741993,11.6416516832557,8.40715172438085,8.32066752738405,8.2697028357056,5.69908904311695,10.8438427197983,4.87553033131033,6.79081050146213,5.57295947091781,7.02213187313235,6.17634977075316,3.6941254921427,8.07790512888457,9.85009451920604,10.9837857491219,12.7842157216014,12.5929108318338,11.1072321278912,12.0917651270212,9.38956904898667,15.4130251924664,12.0128690436841,11.6558899496158,11.1064269077822,10.6725990820493,15.1489579550825,7.64976586934119,29.6508827475419,24.6971069710283,0.330418782983798,2.11560453330835,5.75878276445132,9.0572302025571,3.09281907173024,4.23535401709019,3.33567065767305,2.09248188723815,0.949058123089023,2.9645811850322,1.75934646160189,1.79060824837036,4.09424582950152,0,1.51296634912286,0.995706366271836,3.22435431620239,5.82667414309617,5.63538678365402,8.96065842519383,5.04276466635827,3.99774173374816,4.3000845244495,4.57591458736767,2.66897837330337,2.71473760627961,0.592905254174298,4.67166296005063,4.32429789249047,3.82265591054251,3.44862206360455,1.4470629585145,3.31013607315846,2.87696137450811,2.43202840162553,3.56929837144506,4.31304619582064,1.86070473834252,3.43241440426017,2.27320990152401,0.896987067609561,0.482443521363367,6.46636165583116,5.68474235311454,8.8001087278694,8.14776411720903,5.86725620721255,4.85768146581266,3.57065461329021,3.51240566144038,8.03939234941574,6.64394068946325,4.9430978283821,7.20998584749247,6.56202931090403,5.78596234326046,1.50791283939272,1.08781136763742,3.44234991113325,4.69092468718045,7.38532713943843,8.55645312123083,2.29508923527346,3.7870639080656,4.41711507182759,4.68526493155966,7.10897212518236,4.54040716109849,8.02075226696619,7.64306633129848,4.85772842009873,5.26060544240361,9.88219444866309,32.1321316421807,4.9679029822894,5.52003371368491,5.53815661802159,8.90838664051691,0,4.61283208694465,4.23252979750651,3.58349651536206,1.47650946440386,2.76691633149535,1.29214146584111,1.81766864738753,4.63446591900138,1.58018378967908,1.05418608574999,2.06271086496374,2.38307724027652,4.50152735078276,4.2688365648309,4.71541477069503,7.27094957933322,4.8159580752559,5.75921572107423,2.13125464380219,0.469343416127421,2.54198485036584,1.7642271844397,2.96795255294664,6.45857706783622,4.82503399425247,3.46179797609096,5.41664969158702,3.20628920292836,7.23158677840988,4.27177201994632,4.95328483111734,4.44466865687308,3.76736914009382,4.64760374251486,3.43167259809784,11.3885548095883,10.636310376598,8.98299829728755,1.90934123603023,6.16855187483214,7.72613975082025,4.64422965533745,6.06356058441959,5.02233896616208,3.64133735239016,3.47144514046411,1.83229159388821,1.16653475962614,3.10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| |||
|short_description=p2@Zmynd11 | |||
}} |
Latest revision as of 14:09, 25 September 2015
Short description: | p2@Zmynd11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zmynd11_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000062658_5end |
EntrezGene: | Zmynd11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.94e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.94e-10 | 23 |
neuron | 8.22e-09 | 33 |
neuronal stem cell | 8.22e-09 | 33 |
neuroblast | 8.22e-09 | 33 |
electrically signaling cell | 8.22e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 4.49e-15 | 34 |
structure with developmental contribution from neural crest | 7.53e-15 | 92 |
regional part of nervous system | 1.33e-13 | 54 |
neurectoderm | 1.56e-13 | 64 |
neural plate | 1.56e-13 | 64 |
presumptive neural plate | 1.56e-13 | 64 |
brain grey matter | 2.36e-13 | 29 |
regional part of telencephalon | 2.36e-13 | 29 |
telencephalon | 2.36e-13 | 29 |
neural tube | 6.60e-13 | 52 |
neural rod | 6.60e-13 | 52 |
future spinal cord | 6.60e-13 | 52 |
neural keel | 6.60e-13 | 52 |
central nervous system | 9.51e-13 | 73 |
nervous system | 1.18e-12 | 75 |
pre-chordal neural plate | 2.30e-12 | 49 |
brain | 1.25e-11 | 47 |
future brain | 1.25e-11 | 47 |
ecto-epithelium | 1.36e-11 | 73 |
anterior neural tube | 1.63e-11 | 40 |
ectoderm-derived structure | 1.82e-11 | 95 |
ectoderm | 1.82e-11 | 95 |
presumptive ectoderm | 1.82e-11 | 95 |
regional part of forebrain | 3.98e-11 | 39 |
forebrain | 3.98e-11 | 39 |
future forebrain | 3.98e-11 | 39 |
regional part of brain | 4.66e-11 | 46 |
cerebral cortex | 6.07e-10 | 21 |
cerebral hemisphere | 6.07e-10 | 21 |
pallium | 6.07e-10 | 21 |
regional part of cerebral cortex | 4.96e-08 | 17 |
occipital lobe | 5.11e-08 | 10 |
visual cortex | 5.11e-08 | 10 |
neocortex | 5.11e-08 | 10 |
tube | 9.40e-07 | 114 |