FFCP PHASE1:Mm9::chr15:41278929..41278960,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=170719|HGNC=|MCL_coexpression_id=1|UniProt=Q4KMM3|association_with_transcript=-67bp_to_ENSMUST00000090096,ENSMUST00000110297,NM_001130166,uc007vot.2_5end|description=CAGE_peak_4_at_Oxr1_5end|id=chr15:41278929..41278960,+|ontology_enrichment_celltype=CL:0000540!1.82e-13!33;CL:0000047!1.82e-13!33;CL:0000031!1.82e-13!33;CL:0000404!1.82e-13!33;CL:0002319!9.71e-12!43;CL:0000221!3.15e-11!44;CL:0000133!3.15e-11!44;CL:0000393!1.78e-10!39;CL:0000211!1.78e-10!39;CL:0000117!5.53e-09!23;CL:0000337!5.53e-09!23;CL:0000055!6.99e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,4.50e-16,33;CL:0000047,4.50e-16,33;CL:0000031,4.50e-16,33;CL:0000404,4.50e-16,33;CL:0002319,1.45e-12,43;CL:0000393,2.84e-12,39;CL:0000211,2.84e-12,39;CL:0000221,4.47e-12,44;CL:0000133,4.47e-12,44;CL:0000117,7.99e-10,23;CL:0000337,7.99e-10,23;CL:0000107,9.42e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.05e-25!75;UBERON:0001016!2.05e-25!75;UBERON:0001017!2.36e-25!73;UBERON:0005743!2.36e-25!73;UBERON:0004121!2.97e-19!102;UBERON:0000924!2.97e-19!102;UBERON:0006601!2.97e-19!102;UBERON:0002346!1.37e-18!71;UBERON:0003075!1.37e-18!71;UBERON:0007284!1.37e-18!71;UBERON:0001049!7.90e-18!52;UBERON:0005068!7.90e-18!52;UBERON:0006241!7.90e-18!52;UBERON:0007135!7.90e-18!52;UBERON:0000955!2.29e-17!50;UBERON:0006238!2.29e-17!50;UBERON:0002616!1.08e-16!49;UBERON:0002020!6.13e-15!34;UBERON:0000033!7.48e-15!63;UBERON:0002791!1.19e-12!29;UBERON:0003528!1.19e-12!29;UBERON:0001893!1.19e-12!29;UBERON:0003080!2.05e-12!40;UBERON:0002780!7.21e-12!39;UBERON:0001890!7.21e-12!39;UBERON:0006240!7.21e-12!39;UBERON:0003056!1.90e-11!49;UBERON:0000956!6.00e-10!21;UBERON:0001869!6.00e-10!21;UBERON:0000203!6.00e-10!21;UBERON:0002619!2.52e-08!17;UBERON:0002021!4.42e-08!10;UBERON:0000411!4.42e-08!10;UBERON:0001950!4.42e-08!10;UBERON:0007811!9.97e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.02e-33,75;UBERON:0001017,7.63e-33,73;UBERON:0004121,2.78e-24,95;UBERON:0000924,2.78e-24,95;UBERON:0006601,2.78e-24,95;UBERON:0000073,6.56e-23,54;UBERON:0001049,5.93e-21,52;UBERON:0005068,5.93e-21,52;UBERON:0006241,5.93e-21,52;UBERON:0007135,5.93e-21,52;UBERON:0002346,2.55e-20,64;UBERON:0003075,2.55e-20,64;UBERON:0007284,2.55e-20,64;UBERON:0002020,3.89e-18,34;UBERON:0000955,1.94e-17,47;UBERON:0006238,1.94e-17,47;UBERON:0002616,1.82e-16,46;UBERON:0010371,4.47e-16,73;UBERON:0003528,1.81e-14,29;UBERON:0002791,1.81e-14,29;UBERON:0001893,1.81e-14,29;UBERON:0003080,5.26e-14,40;UBERON:0010314,1.10e-13,92;UBERON:0002780,3.46e-13,39;UBERON:0001890,3.46e-13,39;UBERON:0006240,3.46e-13,39;UBERON:0002021,1.37e-12,10;UBERON:0000411,1.37e-12,10;UBERON:0001950,1.37e-12,10;UBERON:0003056,1.32e-11,49;UBERON:0000956,1.59e-11,21;UBERON:0001869,1.59e-11,21;UBERON:0000203,1.59e-11,21;UBERON:0002619,6.87e-09,17;UBERON:0002410,9.42e-09,9;UBERON:0000010,2.21e-08,11;UBERON:0003076,6.54e-08,12;UBERON:0003057,6.54e-08,12|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0.171217968225505,0.319088635981346,0,0.174840804837995,0.333109761815663,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0.251793635951155,0.506884656097573,0,0.782391344348039,0.65407546914134,0.439372365468944,0.58328969722285,0.139986421625363,0,0,0,0.336093799142464,0.514518872071894,0.286533439938757,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0.988866362566974,0,2.09720077362883,0.384218305321555,1.65903379693564,1.75507719831198,1.26194976810829,6.85562362569129,2.20868540951614,0.979926393719632,0.575072826109418,0.919218786610021,15.4162233399144,12.7687338085188,13.8245879930619,0.659431438650969,0.731901148819277,1.04182674111352,8.65467296904281,10.1297269805702,14.0574387954665,3.53554302568401,2.56269025438385,1.4911955666024,0.227178579999552,3.09843396437821,3.47837386442013,0,0,0,0.649776417447669,0,1.54488862144927,0,0,0,0.14084341977668,0,0,0,1.29894624606728,0.253359865475099,0.505524445014783,1.37020655662872,0,2.82040064223167,0.520455980298408,0.608930956624282,0,0.753613202763113,0.940709657085638,2.51333182659351,0,0.86759614151947,0.884610551949874,1.7794353494215,0.220841518460394,0,1.86391761218122,18.4451902117275,19.4785437336513,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,11.5338792341713,8.23501085073528,1.7591609295801,45.0204989297996,35.0330176542553,14.7529511637288,13.4660248346239,0.101839363850316,0.373220911830279,0.505445516867349,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.884474488967262,1.0249097622788,0.655912071918102,3.88055056108524,0,0.378212160335639,0.703804496655795,0.43839146485515,1.66828349535359,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,0.469052119962192,0.900310307305074,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,0.817357396570186,0.493679549740441,1.31333971263276,1.29710095273369,0.730999937126662,1.09775057645525,0.536825675041487,27.7582732104648,2.05809224758569,0,0.528901133327089,0.213288250535234,0,0,0.403367049246685,0.444756087689741,0.760902504450237,0.949058123089023,0,0.502670417600539,0.596869416123452,0.19496408711912,0,0.432276099749388,0.199141273254367,0.569003702859245,0.456994050438915,0,0.814605311381257,0.193952487167626,0.420814919341911,0.758838445491087,1.03327103585722,0.784993639206874,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0.469380496577004,0.837531287209079,0.238043640886014,0,0.315270288212382,0.8858587585951,0.318909537314974,0.163863314715738,0.518054945597687,0.433947175744535,1.50791283939272,0,0,0,15.0917554588524,16.6440594960929,0,0.252470927204373,4.41711507182759,1.95219372148319,3.23135096599198,3.58453196928828,6.23836287430704,6.51076020814315,3.64329631507405,4.9683495844923,5.92931666919785,31.4894890093371,0.851640511249612,0,0.81443479676788,1.15479086080775,0,0.485561272309963,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,0,0.540183282093931,0,0.428674070063185,0.709360934569094,1.07021290561242,1.31639216481697,0.608929898229199,0.469343416127421,0.21183207086382,0,0.49465875882444,0,0.241251699712623,0.119372344003136,0.164140899745061,0.874442509889552,7.78786268444141,0.341741761595705,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,1.90934123603023,0.474503990371703,1.01659733563424,0.108005340821801,0.836353184057875,0.218362563746178,0.809186078308924,1.1571483801547,1.04702376793612,0.129614973291793,0,0,0.897099276263873,0.66183396182839,0.388902376688095,0.516639293910924,1.520605129417,1.05621514781179,1.5624526181274,0.943734099831398,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.381034033274999,0.504130925684203,0.487289403698762,0.288635524920988,0.233753804363138,0.453460767230423,0,0,0.167884616364078,0.772758376128762,0.187682475451182,0.549454872801795,0.428736758158132,0,16.3778034358949,15.651058041244,14.8952833494243,26.2935368985842,38.364621107156,35.5035131773159,29.7009900101995,31.5224842256954,34.8919654917838,34.6899408873719,0,0,0.853668028770671,0.486213434136588,0.209613162627982,0.919217542250071,0.666740183404846,1.64828045791115,1.28367683836726,1.76888048234658,0.760437899670719,0.565879024158229,1.77918864192777,1.40855335290712,0.861532034334199,0.952587382566147,1.85414921511769,0.77163688185482,0.824171801606613,0.588795680537589,0.342869252385415,0.70990322463735,0.953744759789284,0.581385666529314,0.941093804153306,0.930760686808441,0.914639864363863,0,0.271608227691724,1.68342681497322,1.66089025373844,1.67457620038458,0.818462086339379,1.54936841185966,0.578719832943424,1.74867404556562,1.63752125911786,0.214871054048298,0.382576664137687,1.32354851471709,0.463735671240843|short_description=p4@Oxr1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170719 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q4KMM3 | |||
|association_with_transcript=-67bp_to_ENSMUST00000090096,ENSMUST00000110297,NM_001130166,uc007vot.2_5end | |||
|cluster_id=chr15:41278929..41278960,+ | |||
|description=CAGE_peak_4_at_Oxr1_5end | |||
|id=chr15:41278929..41278960,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.82e-13!33;CL:0000047!1.82e-13!33;CL:0000031!1.82e-13!33;CL:0000404!1.82e-13!33;CL:0002319!9.71e-12!43;CL:0000221!3.15e-11!44;CL:0000133!3.15e-11!44;CL:0000393!1.78e-10!39;CL:0000211!1.78e-10!39;CL:0000117!5.53e-09!23;CL:0000337!5.53e-09!23;CL:0000055!6.99e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.50e-16,33;CL:0000047,4.50e-16,33;CL:0000031,4.50e-16,33;CL:0000404,4.50e-16,33;CL:0002319,1.45e-12,43;CL:0000393,2.84e-12,39;CL:0000211,2.84e-12,39;CL:0000221,4.47e-12,44;CL:0000133,4.47e-12,44;CL:0000117,7.99e-10,23;CL:0000337,7.99e-10,23;CL:0000107,9.42e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.05e-25!75;UBERON:0001016!2.05e-25!75;UBERON:0001017!2.36e-25!73;UBERON:0005743!2.36e-25!73;UBERON:0004121!2.97e-19!102;UBERON:0000924!2.97e-19!102;UBERON:0006601!2.97e-19!102;UBERON:0002346!1.37e-18!71;UBERON:0003075!1.37e-18!71;UBERON:0007284!1.37e-18!71;UBERON:0001049!7.90e-18!52;UBERON:0005068!7.90e-18!52;UBERON:0006241!7.90e-18!52;UBERON:0007135!7.90e-18!52;UBERON:0000955!2.29e-17!50;UBERON:0006238!2.29e-17!50;UBERON:0002616!1.08e-16!49;UBERON:0002020!6.13e-15!34;UBERON:0000033!7.48e-15!63;UBERON:0002791!1.19e-12!29;UBERON:0003528!1.19e-12!29;UBERON:0001893!1.19e-12!29;UBERON:0003080!2.05e-12!40;UBERON:0002780!7.21e-12!39;UBERON:0001890!7.21e-12!39;UBERON:0006240!7.21e-12!39;UBERON:0003056!1.90e-11!49;UBERON:0000956!6.00e-10!21;UBERON:0001869!6.00e-10!21;UBERON:0000203!6.00e-10!21;UBERON:0002619!2.52e-08!17;UBERON:0002021!4.42e-08!10;UBERON:0000411!4.42e-08!10;UBERON:0001950!4.42e-08!10;UBERON:0007811!9.97e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.02e-33,75;UBERON:0001017,7.63e-33,73;UBERON:0004121,2.78e-24,95;UBERON:0000924,2.78e-24,95;UBERON:0006601,2.78e-24,95;UBERON:0000073,6.56e-23,54;UBERON:0001049,5.93e-21,52;UBERON:0005068,5.93e-21,52;UBERON:0006241,5.93e-21,52;UBERON:0007135,5.93e-21,52;UBERON:0002346,2.55e-20,64;UBERON:0003075,2.55e-20,64;UBERON:0007284,2.55e-20,64;UBERON:0002020,3.89e-18,34;UBERON:0000955,1.94e-17,47;UBERON:0006238,1.94e-17,47;UBERON:0002616,1.82e-16,46;UBERON:0010371,4.47e-16,73;UBERON:0003528,1.81e-14,29;UBERON:0002791,1.81e-14,29;UBERON:0001893,1.81e-14,29;UBERON:0003080,5.26e-14,40;UBERON:0010314,1.10e-13,92;UBERON:0002780,3.46e-13,39;UBERON:0001890,3.46e-13,39;UBERON:0006240,3.46e-13,39;UBERON:0002021,1.37e-12,10;UBERON:0000411,1.37e-12,10;UBERON:0001950,1.37e-12,10;UBERON:0003056,1.32e-11,49;UBERON:0000956,1.59e-11,21;UBERON:0001869,1.59e-11,21;UBERON:0000203,1.59e-11,21;UBERON:0002619,6.87e-09,17;UBERON:0002410,9.42e-09,9;UBERON:0000010,2.21e-08,11;UBERON:0003076,6.54e-08,12;UBERON:0003057,6.54e-08,12 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0.171217968225505,0.319088635981346,0,0.174840804837995,0.333109761815663,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0.251793635951155,0.506884656097573,0,0.782391344348039,0.65407546914134,0.439372365468944,0.58328969722285,0.139986421625363,0,0,0,0.336093799142464,0.514518872071894,0.286533439938757,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0.988866362566974,0,2.09720077362883,0.384218305321555,1.65903379693564,1.75507719831198,1.26194976810829,6.85562362569129,2.20868540951614,0.979926393719632,0.575072826109418,0.919218786610021,15.4162233399144,12.7687338085188,13.8245879930619,0.659431438650969,0.731901148819277,1.04182674111352,8.65467296904281,10.1297269805702,14.0574387954665,3.53554302568401,2.56269025438385,1.4911955666024,0.227178579999552,3.09843396437821,3.47837386442013,0,0,0,0.649776417447669,0,1.54488862144927,0,0,0,0.14084341977668,0,0,0,1.29894624606728,0.253359865475099,0.505524445014783,1.37020655662872,0,2.82040064223167,0.520455980298408,0.608930956624282,0,0.753613202763113,0.940709657085638,2.51333182659351,0,0.86759614151947,0.884610551949874,1.7794353494215,0.220841518460394,0,1.86391761218122,18.4451902117275,19.4785437336513,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,11.5338792341713,8.23501085073528,1.7591609295801,45.0204989297996,35.0330176542553,14.7529511637288,13.4660248346239,0.101839363850316,0.373220911830279,0.505445516867349,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.884474488967262,1.0249097622788,0.655912071918102,3.88055056108524,0,0.378212160335639,0.703804496655795,0.43839146485515,1.66828349535359,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,0.469052119962192,0.900310307305074,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,0.817357396570186,0.493679549740441,1.31333971263276,1.29710095273369,0.730999937126662,1.09775057645525,0.536825675041487,27.7582732104648,2.05809224758569,0,0.528901133327089,0.213288250535234,0,0,0.403367049246685,0.444756087689741,0.760902504450237,0.949058123089023,0,0.502670417600539,0.596869416123452,0.19496408711912,0,0.432276099749388,0.199141273254367,0.569003702859245,0.456994050438915,0,0.814605311381257,0.193952487167626,0.420814919341911,0.758838445491087,1.03327103585722,0.784993639206874,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0.469380496577004,0.837531287209079,0.238043640886014,0,0.315270288212382,0.8858587585951,0.318909537314974,0.163863314715738,0.518054945597687,0.433947175744535,1.50791283939272,0,0,0,15.0917554588524,16.6440594960929,0,0.252470927204373,4.41711507182759,1.95219372148319,3.23135096599198,3.58453196928828,6.23836287430704,6.51076020814315,3.64329631507405,4.9683495844923,5.92931666919785,31.4894890093371,0.851640511249612,0,0.81443479676788,1.15479086080775,0,0.485561272309963,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.712994756769443,0.632073515871632,0,0,0,0.540183282093931,0,0.428674070063185,0.709360934569094,1.07021290561242,1.31639216481697,0.608929898229199,0.469343416127421,0.21183207086382,0,0.49465875882444,0,0.241251699712623,0.119372344003136,0.164140899745061,0.874442509889552,7.78786268444141,0.341741761595705,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0.138199973804424,1.90934123603023,0.474503990371703,1.01659733563424,0.108005340821801,0.836353184057875,0.218362563746178,0.809186078308924,1.1571483801547,1.04702376793612,0.129614973291793,0,0,0.897099276263873,0.66183396182839,0.388902376688095,0.516639293910924,1.520605129417,1.05621514781179,1.5624526181274,0.943734099831398,0,0,0,0.405450430580328,0.205421914329655,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.381034033274999,0.504130925684203,0.487289403698762,0.288635524920988,0.233753804363138,0.453460767230423,0,0,0.167884616364078,0.772758376128762,0.187682475451182,0.549454872801795,0.428736758158132,0,16.3778034358949,15.651058041244,14.8952833494243,26.2935368985842,38.364621107156,35.5035131773159,29.7009900101995,31.5224842256954,34.8919654917838,34.6899408873719,0,0,0.853668028770671,0.486213434136588,0.209613162627982,0.919217542250071,0.666740183404846,1.64828045791115,1.28367683836726,1.76888048234658,0.760437899670719,0.565879024158229,1.77918864192777,1.40855335290712,0.861532034334199,0.952587382566147,1.85414921511769,0.77163688185482,0.824171801606613,0.588795680537589,0.342869252385415,0.70990322463735,0.953744759789284,0.581385666529314,0.941093804153306,0.930760686808441,0.914639864363863,0,0.271608227691724,1.68342681497322,1.66089025373844,1.67457620038458,0.818462086339379,1.54936841185966,0.578719832943424,1.74867404556562,1.63752125911786,0.214871054048298,0.382576664137687,1.32354851471709,0.463735671240843 | |||
|short_description=p4@Oxr1 | |||
}} |
Latest revision as of 19:01, 26 September 2015
Short description: | p4@Oxr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Oxr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -67bp_to_ENSMUST00000090096, ENSMUST00000110297, NM_001130166, uc007vot.2_5end |
EntrezGene: | Oxr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.50e-16 | 33 |
neuronal stem cell | 4.50e-16 | 33 |
neuroblast | 4.50e-16 | 33 |
electrically signaling cell | 4.50e-16 | 33 |
neural cell | 1.45e-12 | 43 |
electrically responsive cell | 2.84e-12 | 39 |
electrically active cell | 2.84e-12 | 39 |
ectodermal cell | 4.47e-12 | 44 |
neurectodermal cell | 4.47e-12 | 44 |
CNS neuron (sensu Vertebrata) | 7.99e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.99e-10 | 23 |
autonomic neuron | 9.42e-09 | 9 |