FFCP PHASE1:Hg19::chrX:148586773..148586793,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:148586773..148586793,-
|short_description=p2@IDS
|description=CAGE_peak_2_at_IDS_5end
|association_with_transcript=16bp_to_ENST00000428056_5end
|EntrezGen...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3423 | |EntrezGene=3423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5389 | |HGNC=5389 | ||
|TSSclassifier=strong | |||
|UniProt=O60597 | |UniProt=O60597 | ||
|association_with_transcript=16bp_to_ENST00000428056_5end | |||
|cluster_id=chrX:148586773..148586793,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_IDS_5end | |||
|id=chrX:148586773..148586793,- | |||
|ontology_enrichment_celltype=CL:0000766!1.80e-21!76;CL:0002057!6.97e-20!42;CL:0000557!3.03e-18!71;CL:0002009!2.58e-16!65;CL:0000860!5.23e-16!45;CL:0002194!1.25e-15!63;CL:0000576!1.25e-15!63;CL:0000040!1.25e-15!63;CL:0000559!1.25e-15!63;CL:0000738!1.35e-15!140;CL:0000839!2.30e-15!70;CL:0002031!6.37e-11!124;CL:0002087!1.05e-10!119;CL:0000763!1.82e-08!112;CL:0000049!1.82e-08!112;CL:0000037!1.80e-07!172;CL:0000566!1.80e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.66e-16;33!CL:0002057;2.66e-16;33!CL:0000473;3.77e-14;39!CL:0000234;3.77e-14;39!CL:0000576;2.32e-11;48!CL:0000766;3.08e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.52e-24,72;CL:0000557,4.03e-21,67;CL:0000473,1.99e-20,48;CL:0000234,1.99e-20,48;CL:0000860,6.96e-20,42;CL:0002057,6.96e-20,42;CL:0002009,3.80e-19,61;CL:0002194,1.95e-18,59;CL:0000576,1.95e-18,59;CL:0000040,1.95e-18,59;CL:0000559,1.95e-18,59;CL:0000839,6.46e-18,66;CL:0000738,2.88e-17,136;CL:0002031,2.51e-12,120;CL:0002087,3.85e-12,115;CL:0000763,1.01e-09,108;CL:0000049,1.01e-09,108;CL:0000037,2.17e-08,168;CL:0000988,1.04e-07,177;CL:0002032,1.87e-07,161;CL:0000837,1.87e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-23!115;UBERON:0002390!2.91e-19!102;UBERON:0003061!2.91e-19!102;UBERON:0001049!5.79e-19!57;UBERON:0005068!5.79e-19!57;UBERON:0006241!5.79e-19!57;UBERON:0007135!5.79e-19!57;UBERON:0002371!3.20e-17!80;UBERON:0003080!9.59e-17!42;UBERON:0002780!1.19e-16!41;UBERON:0001890!1.19e-16!41;UBERON:0006240!1.19e-16!41;UBERON:0002193!4.60e-16!112;UBERON:0002616!5.91e-16!59;UBERON:0000955!1.05e-15!69;UBERON:0006238!1.05e-15!69;UBERON:0001474!1.62e-15!86;UBERON:0001017!5.76e-15!82;UBERON:0005743!3.23e-14!86;UBERON:0001893!8.02e-14!34;UBERON:0002020!9.96e-14!34;UBERON:0003528!9.96e-14!34;UBERON:0004765!1.70e-13!101;UBERON:0001434!1.70e-13!101;UBERON:0001869!1.74e-13!32;UBERON:0002791!3.16e-13!33;UBERON:0002619!4.84e-12!22;UBERON:0000073!7.93e-12!94;UBERON:0001016!7.93e-12!94;UBERON:0003075!1.99e-11!86;UBERON:0007284!1.99e-11!86;UBERON:0001950!5.69e-11!20;UBERON:0000956!3.86e-10!25;UBERON:0000203!3.86e-10!25;UBERON:0003056!1.02e-09!61;UBERON:0002346!2.55e-09!90;UBERON:0003081!3.04e-09!216;UBERON:0000033!4.47e-08!123;UBERON:0002204!7.42e-08!167;UBERON:0002405!1.46e-07!115;UBERON:0000153!1.57e-07!129;UBERON:0007811!1.57e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.61e-12;32!UBERON:0002780;4.41e-12;41!UBERON:0001890;4.41e-12;41!UBERON:0002619;4.94e-12;22!UBERON:0001893;5.66e-12;34!UBERON:0003528;6.80e-12;34!UBERON:0002020;6.80e-12;34!UBERON:0002791;9.51e-12;32!UBERON:0001950;5.84e-11;20!UBERON:0000073;1.93e-10;53!UBERON:0002616;1.93e-10;53!UBERON:0000956;4.21e-10;25!UBERON:0000203;4.21e-10;25!UBERON:0000955;6.69e-08;68!UBERON:0001017;8.22e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.91e-23,114;UBERON:0002390,1.37e-21,98;UBERON:0003061,1.37e-21,98;UBERON:0002371,9.20e-20,76;UBERON:0001049,7.60e-19,56;UBERON:0005068,7.60e-19,56;UBERON:0006241,7.60e-19,56;UBERON:0007135,7.60e-19,56;UBERON:0000073,5.03e-18,53;UBERON:0002616,5.03e-18,53;UBERON:0002193,5.27e-18,108;UBERON:0001474,9.07e-18,82;UBERON:0002780,1.19e-16,41;UBERON:0001890,1.19e-16,41;UBERON:0003080,1.19e-16,41;UBERON:0006240,1.19e-16,41;UBERON:0000955,1.46e-15,68;UBERON:0006238,1.46e-15,68;UBERON:0004765,2.52e-15,90;UBERON:0001017,8.15e-15,81;UBERON:0001434,2.43e-14,100;UBERON:0002405,2.61e-14,93;UBERON:0001893,8.01e-14,34;UBERON:0003528,9.95e-14,34;UBERON:0002020,9.95e-14,34;UBERON:0001869,1.74e-13,32;UBERON:0002791,5.94e-13,32;UBERON:0001016,2.97e-12,89;UBERON:0003075,3.59e-12,82;UBERON:0007284,3.59e-12,82;UBERON:0002619,4.83e-12,22;UBERON:0003081,2.82e-11,203;UBERON:0001950,5.68e-11,20;UBERON:0000956,3.85e-10,25;UBERON:0000203,3.85e-10,25;UBERON:0002346,6.35e-10,86;UBERON:0003056,9.25e-10,61;UBERON:0010371,3.76e-09,104;UBERON:0002204,5.45e-08,167 | |||
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| ||
|short_description=p2@IDS | |||
}} | }} |
Latest revision as of 21:34, 19 September 2015
Short description: | p2@IDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IDS_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 16bp_to_ENST00000428056_5end |
EntrezGene: | IDS |
HGNC: | 5389 |
UniProt: | O60597 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.52e-24 | 72 |
granulocyte monocyte progenitor cell | 4.03e-21 | 67 |
defensive cell | 1.99e-20 | 48 |
phagocyte | 1.99e-20 | 48 |
classical monocyte | 6.96e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.96e-20 | 42 |
macrophage dendritic cell progenitor | 3.80e-19 | 61 |
monopoietic cell | 1.95e-18 | 59 |
monocyte | 1.95e-18 | 59 |
monoblast | 1.95e-18 | 59 |
promonocyte | 1.95e-18 | 59 |
myeloid lineage restricted progenitor cell | 6.46e-18 | 66 |
leukocyte | 2.88e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.51e-12 | 120 |
nongranular leukocyte | 3.85e-12 | 115 |
myeloid cell | 1.01e-09 | 108 |
common myeloid progenitor | 1.01e-09 | 108 |
hematopoietic stem cell | 2.17e-08 | 168 |
hematopoietic cell | 1.04e-07 | 177 |
hematopoietic oligopotent progenitor cell | 1.87e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-07 | 161 |