FFCP PHASE1:Mm9::chr17:90487662..90487681,-: Difference between revisions
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{{FFCP|EntrezGene=18189|HGNC=|MCL_coexpression_id=1|UniProt=G3UWQ9|association_with_transcript=21bp_to_ENSMUST00000173917_5end|description=CAGE_peak_10_at_Nrxn1_5end|id=chr17:90487662..90487681,-|ontology_enrichment_celltype=CL:0000117!2.93e-15!23;CL:0000337!2.93e-15!23;CL:0000540!3.54e-10!33;CL:0000047!3.54e-10!33;CL:0000031!3.54e-10!33;CL:0000404!3.54e-10!33;CL:0000393!8.39e-08!39;CL:0000211!8.39e-08!39;CL:0002319!2.42e-07!43;CL:0000221!4.67e-07!44;CL:0000133!4.67e-07!44|ontology_enrichment_celltype_v019_2=CL:0002610,2.74e-08,3;CL:0002614,6.19e-08,3;CL:0000117,3.48e-07,23;CL:0000337,3.48e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.55e-34!52;UBERON:0005068!2.55e-34!52;UBERON:0006241!2.55e-34!52;UBERON:0007135!2.55e-34!52;UBERON:0000955!1.56e-32!50;UBERON:0006238!1.56e-32!50;UBERON:0002020!2.95e-32!34;UBERON:0002616!2.61e-31!49;UBERON:0000073!1.32e-28!75;UBERON:0001016!1.32e-28!75;UBERON:0001017!1.78e-28!73;UBERON:0005743!1.78e-28!73;UBERON:0002791!6.31e-27!29;UBERON:0003528!6.31e-27!29;UBERON:0001893!6.31e-27!29;UBERON:0000033!1.30e-24!63;UBERON:0003080!1.38e-24!40;UBERON:0002346!2.56e-24!71;UBERON:0003075!2.56e-24!71;UBERON:0007284!2.56e-24!71;UBERON:0002780!2.73e-23!39;UBERON:0001890!2.73e-23!39;UBERON:0006240!2.73e-23!39;UBERON:0003056!1.40e-19!49;UBERON:0000956!1.81e-18!21;UBERON:0001869!1.81e-18!21;UBERON:0000203!1.81e-18!21;UBERON:0004121!2.60e-18!102;UBERON:0000924!2.60e-18!102;UBERON:0006601!2.60e-18!102;UBERON:0007811!7.83e-15!86;UBERON:0002021!9.49e-15!10;UBERON:0000411!9.49e-15!10;UBERON:0001950!9.49e-15!10;UBERON:0002619!2.10e-14!17;UBERON:0000153!2.11e-13!94;UBERON:0003076!6.47e-10!12;UBERON:0003057!6.47e-10!12;UBERON:0002420!1.54e-09!8;UBERON:0007245!1.54e-09!8;UBERON:0010009!1.54e-09!8;UBERON:0010011!1.54e-09!8;UBERON:0000454!1.54e-09!8;UBERON:0000025!3.90e-09!114;UBERON:0002298!1.84e-08!6;UBERON:0004111!7.90e-08!122;UBERON:0002240!1.24e-07!6;UBERON:0005174!1.24e-07!6;UBERON:0001137!1.24e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.76e-39,54;UBERON:0001049,1.42e-35,52;UBERON:0005068,1.42e-35,52;UBERON:0006241,1.42e-35,52;UBERON:0007135,1.42e-35,52;UBERON:0001017,3.76e-32,73;UBERON:0000955,1.46e-31,47;UBERON:0006238,1.46e-31,47;UBERON:0001016,3.93e-31,75;UBERON:0002616,1.19e-29,46;UBERON:0002346,8.11e-28,64;UBERON:0003075,8.11e-28,64;UBERON:0007284,8.11e-28,64;UBERON:0002020,1.05e-27,34;UBERON:0002021,4.80e-27,10;UBERON:0000411,4.80e-27,10;UBERON:0001950,4.80e-27,10;UBERON:0003528,4.01e-24,29;UBERON:0002791,4.01e-24,29;UBERON:0001893,4.01e-24,29;UBERON:0010371,1.14e-23,73;UBERON:0003080,1.49e-23,40;UBERON:0004121,2.75e-23,95;UBERON:0000924,2.75e-23,95;UBERON:0006601,2.75e-23,95;UBERON:0002619,9.32e-22,17;UBERON:0002780,1.37e-21,39;UBERON:0001890,1.37e-21,39;UBERON:0006240,1.37e-21,39;UBERON:0000956,2.09e-20,21;UBERON:0001869,2.09e-20,21;UBERON:0000203,2.09e-20,21;UBERON:0003056,2.19e-18,49;UBERON:0010314,1.43e-17,92;UBERON:0000025,4.87e-13,114;UBERON:0003076,1.97e-12,12;UBERON:0003057,1.97e-12,12;UBERON:0004111,8.55e-12,122;UBERON:0002950,1.57e-10,4;UBERON:0001891,1.57e-10,4;UBERON:0009616,1.57e-10,4;UBERON:0010286,1.57e-10,4;UBERON:0004684,2.74e-08,3;UBERON:0002275,2.74e-08,3;UBERON:0011216,3.64e-08,194;UBERON:0002038,6.19e-08,3;UBERON:0009663,6.19e-08,3;UBERON:0009661,6.19e-08,3;UBERON:0000125,6.19e-08,3;UBERON:0002308,6.19e-08,3;UBERON:0004733,3.08e-07,6;UBERON:0004732,3.08e-07,6;UBERON:0002028,3.08e-07,6;UBERON:0007277,3.08e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.630974884054146,1.14260393761521,0.220868540951614,0.122490799214954,0.191690942036473,0,3.30347642998166,4.59674417106676,5.68344173048101,0.131886287730194,0.548925861614458,0.52091337055676,3.62937898701795,3.37657566019008,4.12555268997387,1.47314292736834,3.55929201997757,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61230072230023,6.0739544975902,0,0,0,0,9.13722900369418,7.32000964509802,0.628271760564322,15.4703644971126,13.2972037811772,5.61027720310812,6.48965052271031,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8187049078486,1.9551876352064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,4.33683240391152,0,0,0.315508219416257,0,0,0,0,0,0,0,0,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,6.86073617438886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,9.20650473014354,4.58316410751517,6.8741272937475,13.0165678756422,12.0863023582352,8.77529250301348,8.55610286126019,10.8754178156209,8.28416498802912,0,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0,0,0,0,0.188626341386076,0.280924522409647,0.384150914429216,0.516919220600519,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0,0,0,0,0|short_description=p10@Nrxn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18189 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=G3UWQ9 | |||
|association_with_transcript=21bp_to_ENSMUST00000173917_5end | |||
|cluster_id=chr17:90487662..90487681,- | |||
|description=CAGE_peak_10_at_Nrxn1_5end | |||
|id=chr17:90487662..90487681,- | |||
|ontology_enrichment_celltype=CL:0000117!2.93e-15!23;CL:0000337!2.93e-15!23;CL:0000540!3.54e-10!33;CL:0000047!3.54e-10!33;CL:0000031!3.54e-10!33;CL:0000404!3.54e-10!33;CL:0000393!8.39e-08!39;CL:0000211!8.39e-08!39;CL:0002319!2.42e-07!43;CL:0000221!4.67e-07!44;CL:0000133!4.67e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.74e-08,3;CL:0002614,6.19e-08,3;CL:0000117,3.48e-07,23;CL:0000337,3.48e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.55e-34!52;UBERON:0005068!2.55e-34!52;UBERON:0006241!2.55e-34!52;UBERON:0007135!2.55e-34!52;UBERON:0000955!1.56e-32!50;UBERON:0006238!1.56e-32!50;UBERON:0002020!2.95e-32!34;UBERON:0002616!2.61e-31!49;UBERON:0000073!1.32e-28!75;UBERON:0001016!1.32e-28!75;UBERON:0001017!1.78e-28!73;UBERON:0005743!1.78e-28!73;UBERON:0002791!6.31e-27!29;UBERON:0003528!6.31e-27!29;UBERON:0001893!6.31e-27!29;UBERON:0000033!1.30e-24!63;UBERON:0003080!1.38e-24!40;UBERON:0002346!2.56e-24!71;UBERON:0003075!2.56e-24!71;UBERON:0007284!2.56e-24!71;UBERON:0002780!2.73e-23!39;UBERON:0001890!2.73e-23!39;UBERON:0006240!2.73e-23!39;UBERON:0003056!1.40e-19!49;UBERON:0000956!1.81e-18!21;UBERON:0001869!1.81e-18!21;UBERON:0000203!1.81e-18!21;UBERON:0004121!2.60e-18!102;UBERON:0000924!2.60e-18!102;UBERON:0006601!2.60e-18!102;UBERON:0007811!7.83e-15!86;UBERON:0002021!9.49e-15!10;UBERON:0000411!9.49e-15!10;UBERON:0001950!9.49e-15!10;UBERON:0002619!2.10e-14!17;UBERON:0000153!2.11e-13!94;UBERON:0003076!6.47e-10!12;UBERON:0003057!6.47e-10!12;UBERON:0002420!1.54e-09!8;UBERON:0007245!1.54e-09!8;UBERON:0010009!1.54e-09!8;UBERON:0010011!1.54e-09!8;UBERON:0000454!1.54e-09!8;UBERON:0000025!3.90e-09!114;UBERON:0002298!1.84e-08!6;UBERON:0004111!7.90e-08!122;UBERON:0002240!1.24e-07!6;UBERON:0005174!1.24e-07!6;UBERON:0001137!1.24e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.76e-39,54;UBERON:0001049,1.42e-35,52;UBERON:0005068,1.42e-35,52;UBERON:0006241,1.42e-35,52;UBERON:0007135,1.42e-35,52;UBERON:0001017,3.76e-32,73;UBERON:0000955,1.46e-31,47;UBERON:0006238,1.46e-31,47;UBERON:0001016,3.93e-31,75;UBERON:0002616,1.19e-29,46;UBERON:0002346,8.11e-28,64;UBERON:0003075,8.11e-28,64;UBERON:0007284,8.11e-28,64;UBERON:0002020,1.05e-27,34;UBERON:0002021,4.80e-27,10;UBERON:0000411,4.80e-27,10;UBERON:0001950,4.80e-27,10;UBERON:0003528,4.01e-24,29;UBERON:0002791,4.01e-24,29;UBERON:0001893,4.01e-24,29;UBERON:0010371,1.14e-23,73;UBERON:0003080,1.49e-23,40;UBERON:0004121,2.75e-23,95;UBERON:0000924,2.75e-23,95;UBERON:0006601,2.75e-23,95;UBERON:0002619,9.32e-22,17;UBERON:0002780,1.37e-21,39;UBERON:0001890,1.37e-21,39;UBERON:0006240,1.37e-21,39;UBERON:0000956,2.09e-20,21;UBERON:0001869,2.09e-20,21;UBERON:0000203,2.09e-20,21;UBERON:0003056,2.19e-18,49;UBERON:0010314,1.43e-17,92;UBERON:0000025,4.87e-13,114;UBERON:0003076,1.97e-12,12;UBERON:0003057,1.97e-12,12;UBERON:0004111,8.55e-12,122;UBERON:0002950,1.57e-10,4;UBERON:0001891,1.57e-10,4;UBERON:0009616,1.57e-10,4;UBERON:0010286,1.57e-10,4;UBERON:0004684,2.74e-08,3;UBERON:0002275,2.74e-08,3;UBERON:0011216,3.64e-08,194;UBERON:0002038,6.19e-08,3;UBERON:0009663,6.19e-08,3;UBERON:0009661,6.19e-08,3;UBERON:0000125,6.19e-08,3;UBERON:0002308,6.19e-08,3;UBERON:0004733,3.08e-07,6;UBERON:0004732,3.08e-07,6;UBERON:0002028,3.08e-07,6;UBERON:0007277,3.08e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.630974884054146,1.14260393761521,0.220868540951614,0.122490799214954,0.191690942036473,0,3.30347642998166,4.59674417106676,5.68344173048101,0.131886287730194,0.548925861614458,0.52091337055676,3.62937898701795,3.37657566019008,4.12555268997387,1.47314292736834,3.55929201997757,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61230072230023,6.0739544975902,0,0,0,0,9.13722900369418,7.32000964509802,0.628271760564322,15.4703644971126,13.2972037811772,5.61027720310812,6.48965052271031,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8187049078486,1.9551876352064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,4.33683240391152,0,0,0.315508219416257,0,0,0,0,0,0,0,0,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,6.86073617438886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,9.20650473014354,4.58316410751517,6.8741272937475,13.0165678756422,12.0863023582352,8.77529250301348,8.55610286126019,10.8754178156209,8.28416498802912,0,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0,0,0,0,0.188626341386076,0.280924522409647,0.384150914429216,0.516919220600519,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.543216455383447,0,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0,0,0,0,0 | |||
|short_description=p10@Nrxn1 | |||
}} |
Latest revision as of 00:49, 27 September 2015
Short description: | p10@Nrxn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Nrxn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 21bp_to_ENSMUST00000173917_5end |
EntrezGene: | Nrxn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.74e-08 | 3 |
neuron of the substantia nigra | 6.19e-08 | 3 |
CNS neuron (sensu Vertebrata) | 3.48e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.48e-07 | 23 |