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FFCP PHASE1:Mm9::chr1:133422413..133422424,-: Difference between revisions

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{{FFCP|EntrezGene=14270|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=-243bp_to_uc011wrq.1_5end|description=CAGE_peak_9_at_Srgap2_5end|id=chr1:133422413..133422424,-|ontology_enrichment_celltype=CL:0000540!1.66e-10!33;CL:0000047!1.66e-10!33;CL:0000031!1.66e-10!33;CL:0000404!1.66e-10!33;CL:0000393!6.48e-10!39;CL:0000211!6.48e-10!39;CL:0000221!2.26e-09!44;CL:0000133!2.26e-09!44;CL:0000117!2.73e-09!23;CL:0000337!2.73e-09!23;CL:0002319!7.70e-09!43;CL:0000055!4.04e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.16e-07,23;CL:0000337,9.16e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.21e-18!75;UBERON:0001016!8.21e-18!75;UBERON:0001017!2.14e-17!73;UBERON:0005743!2.14e-17!73;UBERON:0001049!2.29e-16!52;UBERON:0005068!2.29e-16!52;UBERON:0006241!2.29e-16!52;UBERON:0007135!2.29e-16!52;UBERON:0004121!3.20e-15!102;UBERON:0000924!3.20e-15!102;UBERON:0006601!3.20e-15!102;UBERON:0000955!9.53e-14!50;UBERON:0006238!9.53e-14!50;UBERON:0002020!1.09e-13!34;UBERON:0000033!2.84e-13!63;UBERON:0002616!2.88e-13!49;UBERON:0002346!7.28e-12!71;UBERON:0003075!7.28e-12!71;UBERON:0007284!7.28e-12!71;UBERON:0002791!1.85e-11!29;UBERON:0003528!1.85e-11!29;UBERON:0001893!1.85e-11!29;UBERON:0003080!2.82e-11!40;UBERON:0002780!1.18e-10!39;UBERON:0001890!1.18e-10!39;UBERON:0006240!1.18e-10!39;UBERON:0003056!2.96e-09!49;UBERON:0000153!1.70e-07!94;UBERON:0007811!3.08e-07!86;UBERON:0000956!3.20e-07!21;UBERON:0001869!3.20e-07!21;UBERON:0000203!3.20e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.86e-19,52;UBERON:0005068,1.86e-19,52;UBERON:0006241,1.86e-19,52;UBERON:0007135,1.86e-19,52;UBERON:0002616,5.14e-17,46;UBERON:0000073,8.19e-17,54;UBERON:0000955,1.56e-16,47;UBERON:0006238,1.56e-16,47;UBERON:0010371,4.36e-16,73;UBERON:0002020,2.50e-15,34;UBERON:0002346,1.28e-14,64;UBERON:0003075,1.28e-14,64;UBERON:0007284,1.28e-14,64;UBERON:0003528,2.05e-14,29;UBERON:0002791,2.05e-14,29;UBERON:0001893,2.05e-14,29;UBERON:0001017,3.12e-13,73;UBERON:0001016,1.04e-12,75;UBERON:0003080,1.67e-12,40;UBERON:0004121,9.00e-12,95;UBERON:0000924,9.00e-12,95;UBERON:0006601,9.00e-12,95;UBERON:0002420,1.74e-11,8;UBERON:0007245,1.74e-11,8;UBERON:0010009,1.74e-11,8;UBERON:0010011,1.74e-11,8;UBERON:0000454,1.74e-11,8;UBERON:0002780,3.01e-11,39;UBERON:0001890,3.01e-11,39;UBERON:0006240,3.01e-11,39;UBERON:0000369,4.38e-10,5;UBERON:0002435,4.38e-10,5;UBERON:0000204,4.38e-10,5;UBERON:0010082,4.38e-10,5;UBERON:0003056,2.08e-09,49;UBERON:0010314,2.89e-09,92;UBERON:0003076,3.89e-08,12;UBERON:0003057,3.89e-08,12|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0.65407546914134,0.219686182734472,0.388859798148567,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,1.34796496001021,0.675029691658453,0.420649922702764,0.571301968807607,0.662605622854841,1.83736198822431,1.43768206527355,0.919218786610021,0,0.766124028511126,0.307213066512487,1.18697658957174,1.09785172322892,1.04182674111352,1.3959149950069,1.12552522006336,0.61119299110724,1.17851434189467,1.56608848879013,0.745597783301202,0.605809546665472,0.302286240427142,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,1.40843419776681,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0.776813650941515,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0.662524555381181,0.484875253135222,0,8.49064311333487,5.86450779077674,0,0.11981512450592,0,0.127070227073065,1.79748767285787,2.28750301409313,3.8952849154988,0.695297280769106,1.02286182932132,0.83115217823824,1.46017136760982,0.305518091550949,0.373220911830279,0,0,0.130120442962704,0.229902104433473,0,0,0.272145996605311,0.384341160854549,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.61734640922383,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.583826711835847,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0.630869845692382,2.46971069710283,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0.754005626400808,0,0,0,0,0,0,0,0,0.407302655690628,0.387904974335251,0.140271639780637,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0.630540576424764,0,0.159454768657487,0.491589944147214,0.345369963731791,0,0,0,0,0,1.9266070798535,1.28932855251423,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.716906393857656,0.668396022247182,0.283076530788832,0,1.16902343164525,0.395287777946524,0.963963949265421,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0.60464711392950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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14270
|HGNC=
|MCL_coexpression_id=30
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-243bp_to_uc011wrq.1_5end
|cluster_id=chr1:133422413..133422424,-
|description=CAGE_peak_9_at_Srgap2_5end
|id=chr1:133422413..133422424,-
|ontology_enrichment_celltype=CL:0000540!1.66e-10!33;CL:0000047!1.66e-10!33;CL:0000031!1.66e-10!33;CL:0000404!1.66e-10!33;CL:0000393!6.48e-10!39;CL:0000211!6.48e-10!39;CL:0000221!2.26e-09!44;CL:0000133!2.26e-09!44;CL:0000117!2.73e-09!23;CL:0000337!2.73e-09!23;CL:0002319!7.70e-09!43;CL:0000055!4.04e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,9.16e-07,23;CL:0000337,9.16e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.21e-18!75;UBERON:0001016!8.21e-18!75;UBERON:0001017!2.14e-17!73;UBERON:0005743!2.14e-17!73;UBERON:0001049!2.29e-16!52;UBERON:0005068!2.29e-16!52;UBERON:0006241!2.29e-16!52;UBERON:0007135!2.29e-16!52;UBERON:0004121!3.20e-15!102;UBERON:0000924!3.20e-15!102;UBERON:0006601!3.20e-15!102;UBERON:0000955!9.53e-14!50;UBERON:0006238!9.53e-14!50;UBERON:0002020!1.09e-13!34;UBERON:0000033!2.84e-13!63;UBERON:0002616!2.88e-13!49;UBERON:0002346!7.28e-12!71;UBERON:0003075!7.28e-12!71;UBERON:0007284!7.28e-12!71;UBERON:0002791!1.85e-11!29;UBERON:0003528!1.85e-11!29;UBERON:0001893!1.85e-11!29;UBERON:0003080!2.82e-11!40;UBERON:0002780!1.18e-10!39;UBERON:0001890!1.18e-10!39;UBERON:0006240!1.18e-10!39;UBERON:0003056!2.96e-09!49;UBERON:0000153!1.70e-07!94;UBERON:0007811!3.08e-07!86;UBERON:0000956!3.20e-07!21;UBERON:0001869!3.20e-07!21;UBERON:0000203!3.20e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.86e-19,52;UBERON:0005068,1.86e-19,52;UBERON:0006241,1.86e-19,52;UBERON:0007135,1.86e-19,52;UBERON:0002616,5.14e-17,46;UBERON:0000073,8.19e-17,54;UBERON:0000955,1.56e-16,47;UBERON:0006238,1.56e-16,47;UBERON:0010371,4.36e-16,73;UBERON:0002020,2.50e-15,34;UBERON:0002346,1.28e-14,64;UBERON:0003075,1.28e-14,64;UBERON:0007284,1.28e-14,64;UBERON:0003528,2.05e-14,29;UBERON:0002791,2.05e-14,29;UBERON:0001893,2.05e-14,29;UBERON:0001017,3.12e-13,73;UBERON:0001016,1.04e-12,75;UBERON:0003080,1.67e-12,40;UBERON:0004121,9.00e-12,95;UBERON:0000924,9.00e-12,95;UBERON:0006601,9.00e-12,95;UBERON:0002420,1.74e-11,8;UBERON:0007245,1.74e-11,8;UBERON:0010009,1.74e-11,8;UBERON:0010011,1.74e-11,8;UBERON:0000454,1.74e-11,8;UBERON:0002780,3.01e-11,39;UBERON:0001890,3.01e-11,39;UBERON:0006240,3.01e-11,39;UBERON:0000369,4.38e-10,5;UBERON:0002435,4.38e-10,5;UBERON:0000204,4.38e-10,5;UBERON:0010082,4.38e-10,5;UBERON:0003056,2.08e-09,49;UBERON:0010314,2.89e-09,92;UBERON:0003076,3.89e-08,12;UBERON:0003057,3.89e-08,12
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0.65407546914134,0.219686182734472,0.388859798148567,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,1.34796496001021,0.675029691658453,0.420649922702764,0.571301968807607,0.662605622854841,1.83736198822431,1.43768206527355,0.919218786610021,0,0.766124028511126,0.307213066512487,1.18697658957174,1.09785172322892,1.04182674111352,1.3959149950069,1.12552522006336,0.61119299110724,1.17851434189467,1.56608848879013,0.745597783301202,0.605809546665472,0.302286240427142,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,1.40843419776681,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0.776813650941515,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0.662524555381181,0.484875253135222,0,8.49064311333487,5.86450779077674,0,0.11981512450592,0,0.127070227073065,1.79748767285787,2.28750301409313,3.8952849154988,0.695297280769106,1.02286182932132,0.83115217823824,1.46017136760982,0.305518091550949,0.373220911830279,0,0,0.130120442962704,0.229902104433473,0,0,0.272145996605311,0.384341160854549,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0.61734640922383,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.583826711835847,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0.630869845692382,2.46971069710283,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0.754005626400808,0,0,0,0,0,0,0,0,0.407302655690628,0.387904974335251,0.140271639780637,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0.630540576424764,0,0.159454768657487,0.491589944147214,0.345369963731791,0,0,0,0,0,1.9266070798535,1.28932855251423,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0.716906393857656,0.668396022247182,0.283076530788832,0,1.16902343164525,0.395287777946524,0.963963949265421,0,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0.188605079755898,0,0.614870295887855,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.388076051348264,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,1.48397627647332,1.29171541356724,0.603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,1.29797711407357,0,0,0,0,0,0.228778173206523,0,0.279902904647316,0,1.90934123603023,0.316335993581135,0.203319467126849,0.216010681643603,0.209088296014469,0.87345025498471,0.269728692769641,0.41326727862668,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0.337912250981556,0.352071715937262,0,0.209718688851422,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.116876902181569,0.680191150845634,0,0.0897138566094757,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,1.12950368523413,1.38097570952153,1.14579102687879,1.20297227640581,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0.243106717068294,1.25767897576789,0.183843508450014,0.222246727801615,1.03017528619447,0.320919209591815,0.505394423527595,0.760437899670719,1.13175804831646,1.21733959710847,0.704276676453562,0.804096565378586,0.476293691283074,1.15884325944855,1.15745532278223,0.824171801606613,0.735994600671987,1.02860775715625,0.70990322463735,0.476872379894642,0.436039249896986,0.376437521661322,0.592302255241736,0.73171189149109,1.31534855718921,0.679020569229309,2.24456908663095,0.830445126869219,0.591026894253381,0.818462086339379,0.464810523557898,1.35034627686799,0.249810577937946,0,1.50409737833809,1.53030665655075,0.441182838239031,0.231867835620421
|short_description=p9@Srgap2
}}

Latest revision as of 08:28, 26 September 2015

Short description:p9@Srgap2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Srgap2_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: -243bp_to_uc011wrq.1_5end
EntrezGene:Srgap2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Srgap2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.16e-0723
neuroblast (sensu Vertebrata)9.16e-0723

Uber anatomy
Ontology termp-valuen
neural tube1.86e-1952
neural rod1.86e-1952
future spinal cord1.86e-1952
neural keel1.86e-1952
regional part of brain5.14e-1746
regional part of nervous system8.19e-1754
brain1.56e-1647
future brain1.56e-1647
ecto-epithelium4.36e-1673
gray matter2.50e-1534
neurectoderm1.28e-1464
neural plate1.28e-1464
presumptive neural plate1.28e-1464
brain grey matter2.05e-1429
regional part of telencephalon2.05e-1429
telencephalon2.05e-1429
central nervous system3.12e-1373
nervous system1.04e-1275
anterior neural tube1.67e-1240
ectoderm-derived structure9.00e-1295
ectoderm9.00e-1295
presumptive ectoderm9.00e-1295
basal ganglion1.74e-118
nuclear complex of neuraxis1.74e-118
aggregate regional part of brain1.74e-118
collection of basal ganglia1.74e-118
cerebral subcortex1.74e-118
regional part of forebrain3.01e-1139
forebrain3.01e-1139
future forebrain3.01e-1139
corpus striatum4.38e-105
striatum4.38e-105
ventral part of telencephalon4.38e-105
future corpus striatum4.38e-105
pre-chordal neural plate2.08e-0949
structure with developmental contribution from neural crest2.89e-0992
posterior neural tube3.89e-0812
chordal neural plate3.89e-0812
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