FFCP PHASE1:Mm9::chr2:181100089..181100119,+: Difference between revisions
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{{FFCP|EntrezGene=229007|HGNC=|UniProt=Q8VDM1|association_with_transcript=0bp_to_ENSMUST00000108807_5end|description=CAGE_peak_1_at_Zgpat_5end|id=chr2:181100089..181100119,+|ontology_enrichment_celltype=CL:0000117!6.24e-12!23;CL:0000337!6.24e-12!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.24e-12,23;CL:0000337,6.24e-12,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.31e-24!94;UBERON:0007811!1.78e-23!86;UBERON:0000033!7.26e-20!63;UBERON:0001049!2.31e-19!52;UBERON:0005068!2.31e-19!52;UBERON:0006241!2.31e-19!52;UBERON:0007135!2.31e-19!52;UBERON:0000955!2.22e-18!50;UBERON:0006238!2.22e-18!50;UBERON:0003056!3.09e-18!49;UBERON:0002616!9.60e-18!49;UBERON:0002346!1.76e-17!71;UBERON:0003075!1.76e-17!71;UBERON:0007284!1.76e-17!71;UBERON:0002020!2.99e-17!34;UBERON:0003080!2.45e-16!40;UBERON:0002780!8.42e-16!39;UBERON:0001890!8.42e-16!39;UBERON:0006240!8.42e-16!39;UBERON:0001017!1.79e-15!73;UBERON:0005743!1.79e-15!73;UBERON:0002791!5.18e-15!29;UBERON:0003528!5.18e-15!29;UBERON:0001893!5.18e-15!29;UBERON:0000073!1.51e-14!75;UBERON:0001016!1.51e-14!75;UBERON:0004121!4.36e-13!102;UBERON:0000924!4.36e-13!102;UBERON:0006601!4.36e-13!102;UBERON:0000956!7.66e-11!21;UBERON:0001869!7.66e-11!21;UBERON:0000203!7.66e-11!21;UBERON:0002619!1.37e-08!17;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10;UBERON:0000479!8.73e-07!349;UBERON:0000064!9.03e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.01e-20,54;UBERON:0001049,2.31e-19,52;UBERON:0005068,2.31e-19,52;UBERON:0006241,2.31e-19,52;UBERON:0007135,2.31e-19,52;UBERON:0002346,3.22e-19,64;UBERON:0003075,3.22e-19,64;UBERON:0007284,3.22e-19,64;UBERON:0003056,3.09e-18,49;UBERON:0000955,1.04e-17,47;UBERON:0006238,1.04e-17,47;UBERON:0002020,2.99e-17,34;UBERON:0002616,4.47e-17,46;UBERON:0010371,5.80e-17,73;UBERON:0003080,2.45e-16,40;UBERON:0002780,8.42e-16,39;UBERON:0001890,8.42e-16,39;UBERON:0006240,8.42e-16,39;UBERON:0001017,1.79e-15,73;UBERON:0010314,4.74e-15,92;UBERON:0003528,5.18e-15,29;UBERON:0002791,5.18e-15,29;UBERON:0001893,5.18e-15,29;UBERON:0001016,1.51e-14,75;UBERON:0004121,6.38e-14,95;UBERON:0000924,6.38e-14,95;UBERON:0006601,6.38e-14,95;UBERON:0000956,7.66e-11,21;UBERON:0001869,7.66e-11,21;UBERON:0000203,7.66e-11,21;UBERON:0002619,1.37e-08,17;UBERON:0002021,1.79e-07,10;UBERON:0000411,1.79e-07,10;UBERON:0001950,1.79e-07,10;UBERON:0000479,8.73e-07,349|phase1_expression=11.69086583865,7.32848356042658,3.63999391511629,9.98131897312539,6.51164448930251,3.52546471014969,4.90586545250604,23.75869151325,4.78681655315667,7.72412936862578,12.1564757440109,14.9173937321279,20.7152883216759,27.7122675668222,4.33042690360362,6.88415909125408,8.39474253753776,6.78243655520211,7.26706498110415,9.76096199135469,9.09963204616447,2.28369187762036,2.08959831311148,2.71987118748791,2.2940928106717,2.29692785646008,2.15380998079537,2.58565479223067,3.99049180858385,4.28451220591882,3.76941868114018,5.08024538767705,9.22597181376855,15.8481681015439,7.79899373328441,6.4831511689812,5.3084032628216,5.4409111995798,2.3440060335714,2.61761871986899,5.29408339227913,6.83045484958446,5.82612423637384,3.27331726736501,3.95370031756107,4.77221555620372,10.1710874765245,6.32272953503295,6.37089929929968,5.8328969722285,4.75953833526233,7.18762821824858,3.6912173332702,18.859415692295,6.04968838456435,3.08711323243136,4.58453503902011,2.57836046138721,18.8154308599426,16.9277113367051,16.4796164911607,7.79342423759004,2.66788438833342,4.94944844504769,11.8663963508037,7.104801149461,5.09320187881288,8.83702102239575,21.7748185847803,21.0609263797437,15.7743721013537,12.2829923293636,13.2521124570968,20.0884910712525,25.3032043488144,21.1420320920305,12.1127469099328,10.4703617229854,9.5236050618871,22.0250100509424,22.9633985442048,17.7110545989298,12.0048689570594,10.6924895906019,16.1966142643419,12.374400589894,15.0913981647049,17.8943467992289,6.81535739998656,4.38315048619356,10.1452571045587,7.74381489283248,4.0798280022465,8.63525106620507,8.4470934268197,1.79210754838934,4.0728881838208,4.77204903218562,2.33807404142582,6.71345191569646,14.6477156567748,11.5493829672886,7.64415719119937,0,2.38140145112336,2.53359865475099,0.505524445014783,2.96878087269556,6.99132285847364,6.97678053604676,7.28638372417771,5.1759131313064,7.61031140944993,7.988299949289,7.05532242814229,9.55066094105534,7.16865406429684,2.89198713839823,6.19227386364912,6.14714029800155,7.06692859073259,2.42437626567611,0,14.9318206475889,13.1951425292477,6.38642638021478,2.39630249011841,1.79970819298022,2.03312363316904,16.1773890557209,20.1300265240196,21.2355855070741,16.5133104182663,17.9000820131231,10.8049783170971,13.9527486238272,6.72139801412087,5.10068579501381,4.29628689337247,6.94458124425364,11.5807194236806,8.73627996847197,10.0834792690996,11.6042709733501,12.3826428455417,11.2740073850668,13.7741535102801,13.7112786491678,4.52692785158969,11.7245769704048,12.6684809398043,10.302199424096,10.0097009721215,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229007 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8VDM1 | |||
|association_with_transcript=0bp_to_ENSMUST00000108807_5end | |||
|cluster_id=chr2:181100089..181100119,+ | |||
|description=CAGE_peak_1_at_Zgpat_5end | |||
|id=chr2:181100089..181100119,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.24e-12!23;CL:0000337!6.24e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.24e-12,23;CL:0000337,6.24e-12,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.31e-24!94;UBERON:0007811!1.78e-23!86;UBERON:0000033!7.26e-20!63;UBERON:0001049!2.31e-19!52;UBERON:0005068!2.31e-19!52;UBERON:0006241!2.31e-19!52;UBERON:0007135!2.31e-19!52;UBERON:0000955!2.22e-18!50;UBERON:0006238!2.22e-18!50;UBERON:0003056!3.09e-18!49;UBERON:0002616!9.60e-18!49;UBERON:0002346!1.76e-17!71;UBERON:0003075!1.76e-17!71;UBERON:0007284!1.76e-17!71;UBERON:0002020!2.99e-17!34;UBERON:0003080!2.45e-16!40;UBERON:0002780!8.42e-16!39;UBERON:0001890!8.42e-16!39;UBERON:0006240!8.42e-16!39;UBERON:0001017!1.79e-15!73;UBERON:0005743!1.79e-15!73;UBERON:0002791!5.18e-15!29;UBERON:0003528!5.18e-15!29;UBERON:0001893!5.18e-15!29;UBERON:0000073!1.51e-14!75;UBERON:0001016!1.51e-14!75;UBERON:0004121!4.36e-13!102;UBERON:0000924!4.36e-13!102;UBERON:0006601!4.36e-13!102;UBERON:0000956!7.66e-11!21;UBERON:0001869!7.66e-11!21;UBERON:0000203!7.66e-11!21;UBERON:0002619!1.37e-08!17;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10;UBERON:0000479!8.73e-07!349;UBERON:0000064!9.03e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.01e-20,54;UBERON:0001049,2.31e-19,52;UBERON:0005068,2.31e-19,52;UBERON:0006241,2.31e-19,52;UBERON:0007135,2.31e-19,52;UBERON:0002346,3.22e-19,64;UBERON:0003075,3.22e-19,64;UBERON:0007284,3.22e-19,64;UBERON:0003056,3.09e-18,49;UBERON:0000955,1.04e-17,47;UBERON:0006238,1.04e-17,47;UBERON:0002020,2.99e-17,34;UBERON:0002616,4.47e-17,46;UBERON:0010371,5.80e-17,73;UBERON:0003080,2.45e-16,40;UBERON:0002780,8.42e-16,39;UBERON:0001890,8.42e-16,39;UBERON:0006240,8.42e-16,39;UBERON:0001017,1.79e-15,73;UBERON:0010314,4.74e-15,92;UBERON:0003528,5.18e-15,29;UBERON:0002791,5.18e-15,29;UBERON:0001893,5.18e-15,29;UBERON:0001016,1.51e-14,75;UBERON:0004121,6.38e-14,95;UBERON:0000924,6.38e-14,95;UBERON:0006601,6.38e-14,95;UBERON:0000956,7.66e-11,21;UBERON:0001869,7.66e-11,21;UBERON:0000203,7.66e-11,21;UBERON:0002619,1.37e-08,17;UBERON:0002021,1.79e-07,10;UBERON:0000411,1.79e-07,10;UBERON:0001950,1.79e-07,10;UBERON:0000479,8.73e-07,349 | |||
|phase1_expression=11.69086583865,7.32848356042658,3.63999391511629,9.98131897312539,6.51164448930251,3.52546471014969,4.90586545250604,23.75869151325,4.78681655315667,7.72412936862578,12.1564757440109,14.9173937321279,20.7152883216759,27.7122675668222,4.33042690360362,6.88415909125408,8.39474253753776,6.78243655520211,7.26706498110415,9.76096199135469,9.09963204616447,2.28369187762036,2.08959831311148,2.71987118748791,2.2940928106717,2.29692785646008,2.15380998079537,2.58565479223067,3.99049180858385,4.28451220591882,3.76941868114018,5.08024538767705,9.22597181376855,15.8481681015439,7.79899373328441,6.4831511689812,5.3084032628216,5.4409111995798,2.3440060335714,2.61761871986899,5.29408339227913,6.83045484958446,5.82612423637384,3.27331726736501,3.95370031756107,4.77221555620372,10.1710874765245,6.32272953503295,6.37089929929968,5.8328969722285,4.75953833526233,7.18762821824858,3.6912173332702,18.859415692295,6.04968838456435,3.08711323243136,4.58453503902011,2.57836046138721,18.8154308599426,16.9277113367051,16.4796164911607,7.79342423759004,2.66788438833342,4.94944844504769,11.8663963508037,7.104801149461,5.09320187881288,8.83702102239575,21.7748185847803,21.0609263797437,15.7743721013537,12.2829923293636,13.2521124570968,20.0884910712525,25.3032043488144,21.1420320920305,12.1127469099328,10.4703617229854,9.5236050618871,22.0250100509424,22.9633985442048,17.7110545989298,12.0048689570594,10.6924895906019,16.1966142643419,12.374400589894,15.0913981647049,17.8943467992289,6.81535739998656,4.38315048619356,10.1452571045587,7.74381489283248,4.0798280022465,8.63525106620507,8.4470934268197,1.79210754838934,4.0728881838208,4.77204903218562,2.33807404142582,6.71345191569646,14.6477156567748,11.5493829672886,7.64415719119937,0,2.38140145112336,2.53359865475099,0.505524445014783,2.96878087269556,6.99132285847364,6.97678053604676,7.28638372417771,5.1759131313064,7.61031140944993,7.988299949289,7.05532242814229,9.55066094105534,7.16865406429684,2.89198713839823,6.19227386364912,6.14714029800155,7.06692859073259,2.42437626567611,0,14.9318206475889,13.1951425292477,6.38642638021478,2.39630249011841,1.79970819298022,2.03312363316904,16.1773890557209,20.1300265240196,21.2355855070741,16.5133104182663,17.9000820131231,10.8049783170971,13.9527486238272,6.72139801412087,5.10068579501381,4.29628689337247,6.94458124425364,11.5807194236806,8.73627996847197,10.0834792690996,11.6042709733501,12.3826428455417,11.2740073850668,13.7741535102801,13.7112786491678,4.52692785158969,11.7245769704048,12.6684809398043,10.302199424096,10.0097009721215,9.4028084960985,11.9353639116607,10.7478504081986,2.1066395619397,1.80143534980301,1.42081749697796,6.42089894860056,7.27030785941398,8.64297895012871,7.57583153872673,9.05115466038058,8.4846912088058,8.37122201101468,7.77992864058896,7.70651259623319,9.70903114489535,7.05920095540109,9.40398190731926,10.5263990946239,6.58650345873152,8.85762363818454,18.7158054222073,14.6124549578584,6.93879444265976,5.28901133327089,8.10495352033889,8.36052018697579,7.60318021800351,6.6555563125703,13.1203045868473,7.60902504450237,6.64340686162316,5.59976446061637,8.04272668160862,8.15721535368718,8.38345574612217,6.29173586057955,3.24207074812041,5.57595565112228,5.69003702859245,6.39791670614481,5.63538678365402,9.36796108088446,9.89157684554891,6.45249542990931,7.52514791778662,5.31396532726568,5.33795674660674,4.56569506510662,5.33614728756868,6.34011401721157,6.6830058338489,8.54476027062444,4.05720242777006,7.71766911207734,8.14802725700543,6.32931502391783,4.05338066937588,2.47105271869273,2.87536413054709,2.97712758134803,3.43241440426017,4.54641980304801,3.76734568396016,2.41221760681684,7.20537441649758,9.28507917675375,8.47417877498535,7.63852885988347,8.44884893838608,7.87279409976534,8.80761471278251,6.43941037930736,5.83250033192907,5.3151525515706,10.8429242687091,7.37384916220821,8.11619414769709,5.49666422609744,3.01582567878545,5.98296252200581,1.96705709207614,2.20749397043786,10.1146871692309,9.72856998715286,1.63934945376675,4.54447668967871,3.15508219416257,3.12350995437311,7.53981892064796,3.82350076724083,6.23836287430704,8.20921939287614,4.85772842009873,4.09158201075837,5.92931666919785,20.5645642509957,6.95506417520516,12.2865266530406,9.12166972380026,7.9185659026817,10.619611067197,6.79785781233948,7.86041248108353,7.16699303072413,6.79194353625777,5.22639751504677,8.01127708821486,7.27067458955011,6.41695281092498,6.32073515871632,12.6502330289999,8.25084345985495,7.83011093233712,9.90336017172206,17.2047049431063,8.57348140126369,10.8177542521787,10.7021290561242,11.0247843803421,5.78483403317739,4.22409074514679,4.87213762986786,5.07215315526412,7.74965388824956,5.9741837877485,7.29786391630686,6.80422360817878,10.0125948844487,6.70405924248657,8.52956389248344,5.80960994712699,9.08102219038179,6.85219751267933,5.27431679613135,6.69801715833023,6.17701067657611,2.88963330989554,2.51912614182584,4.00779924032829,3.81868247206045,7.59206384594725,8.13277868507395,7.77638453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| |||
|short_description=p1@Zgpat | |||
}} |
Latest revision as of 08:10, 26 September 2015
Short description: | p1@Zgpat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zgpat_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000108807_5end |
EntrezGene: | Zgpat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.24e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.24e-12 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.01e-20 | 54 |
neural tube | 2.31e-19 | 52 |
neural rod | 2.31e-19 | 52 |
future spinal cord | 2.31e-19 | 52 |
neural keel | 2.31e-19 | 52 |
neurectoderm | 3.22e-19 | 64 |
neural plate | 3.22e-19 | 64 |
presumptive neural plate | 3.22e-19 | 64 |
pre-chordal neural plate | 3.09e-18 | 49 |
brain | 1.04e-17 | 47 |
future brain | 1.04e-17 | 47 |
gray matter | 2.99e-17 | 34 |
regional part of brain | 4.47e-17 | 46 |
ecto-epithelium | 5.80e-17 | 73 |
anterior neural tube | 2.45e-16 | 40 |
regional part of forebrain | 8.42e-16 | 39 |
forebrain | 8.42e-16 | 39 |
future forebrain | 8.42e-16 | 39 |
central nervous system | 1.79e-15 | 73 |
structure with developmental contribution from neural crest | 4.74e-15 | 92 |
brain grey matter | 5.18e-15 | 29 |
regional part of telencephalon | 5.18e-15 | 29 |
telencephalon | 5.18e-15 | 29 |
nervous system | 1.51e-14 | 75 |
ectoderm-derived structure | 6.38e-14 | 95 |
ectoderm | 6.38e-14 | 95 |
presumptive ectoderm | 6.38e-14 | 95 |
cerebral cortex | 7.66e-11 | 21 |
cerebral hemisphere | 7.66e-11 | 21 |
pallium | 7.66e-11 | 21 |
regional part of cerebral cortex | 1.37e-08 | 17 |
occipital lobe | 1.79e-07 | 10 |
visual cortex | 1.79e-07 | 10 |
neocortex | 1.79e-07 | 10 |
tissue | 8.73e-07 | 349 |