FFCP PHASE1:Hg19::chr7:14029312..14029325,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3490 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000405192_5end | |||
|cluster_id=chr7:14029312..14029325,- | |||
|coexpression_cluster_id=C4660 | |||
|description=CAGE_peak_4_at_ETV1_5end | |||
|id=chr7:14029312..14029325,- | |||
|ontology_enrichment_celltype=CL:0000055!1.78e-12!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.80e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.42e-27!86;UBERON:0001017!2.02e-27!82;UBERON:0000073!1.00e-26!94;UBERON:0001016!1.00e-26!94;UBERON:0000481!2.76e-23!347;UBERON:0000033!3.54e-23!123;UBERON:0004121!4.47e-23!169;UBERON:0001049!4.98e-23!57;UBERON:0005068!4.98e-23!57;UBERON:0006241!4.98e-23!57;UBERON:0007135!4.98e-23!57;UBERON:0000475!5.52e-23!365;UBERON:0000153!9.31e-23!129;UBERON:0007811!9.31e-23!129;UBERON:0003075!1.77e-22!86;UBERON:0007284!1.77e-22!86;UBERON:0002616!2.08e-22!59;UBERON:0000955!7.34e-22!69;UBERON:0006238!7.34e-22!69;UBERON:0000924!9.02e-22!173;UBERON:0006601!9.02e-22!173;UBERON:0002346!1.80e-20!90;UBERON:0003080!5.55e-19!42;UBERON:0002780!1.09e-18!41;UBERON:0001890!1.09e-18!41;UBERON:0006240!1.09e-18!41;UBERON:0000477!3.09e-18!286;UBERON:0003056!6.51e-18!61;UBERON:0007023!1.82e-17!115;UBERON:0001893!1.38e-16!34;UBERON:0002020!2.25e-16!34;UBERON:0003528!2.25e-16!34;UBERON:0000119!2.31e-16!312;UBERON:0000483!3.87e-16!309;UBERON:0001869!4.33e-16!32;UBERON:0002791!5.86e-16!33;UBERON:0002619!4.21e-14!22;UBERON:0000468!6.09e-14!659;UBERON:0000956!7.24e-14!25;UBERON:0000203!7.24e-14!25;UBERON:0001950!5.90e-13!20;UBERON:0004111!6.63e-13!241;UBERON:0000025!9.66e-13!194;UBERON:0000467!9.78e-13!625;UBERON:0000480!1.55e-12!626;UBERON:0000922!3.16e-12!612;UBERON:0002050!4.17e-10!605;UBERON:0005423!4.17e-10!605;UBERON:0000923!7.34e-10!604;UBERON:0005291!7.34e-10!604;UBERON:0006598!7.34e-10!604;UBERON:0002532!7.34e-10!604;UBERON:0000062!2.31e-09!511;UBERON:0000064!9.12e-09!219;UBERON:0001048!1.37e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.12e-20;22!UBERON:0001869;1.56e-19;32!UBERON:0001893;2.32e-19;34!UBERON:0002791;3.63e-19;32!UBERON:0003528;4.63e-19;34!UBERON:0002020;4.63e-19;34!UBERON:0002780;1.35e-18;41!UBERON:0001890;1.35e-18;41!UBERON:0001950;2.21e-18;20!UBERON:0000956;3.60e-18;25!UBERON:0000203;3.60e-18;25!UBERON:0000073;1.28e-17;53!UBERON:0002616;1.28e-17;53!UBERON:0001017;2.32e-12;75!UBERON:0001016;7.72e-12;83!UBERON:0000955;1.36e-11;68!UBERON:0010314;1.21e-07;132!UBERON:0001871;3.41e-07;6!UBERON:0000200;5.73e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.35e-34,81;UBERON:0001016,1.84e-33,89;UBERON:0001049,4.86e-32,56;UBERON:0005068,4.86e-32,56;UBERON:0006241,4.86e-32,56;UBERON:0007135,4.86e-32,56;UBERON:0000073,2.00e-30,53;UBERON:0002616,2.00e-30,53;UBERON:0010314,7.60e-30,132;UBERON:0003075,3.33e-29,82;UBERON:0007284,3.33e-29,82;UBERON:0000955,2.21e-27,68;UBERON:0006238,2.21e-27,68;UBERON:0002346,8.07e-27,86;UBERON:0002780,2.72e-26,41;UBERON:0001890,2.72e-26,41;UBERON:0003080,2.72e-26,41;UBERON:0006240,2.72e-26,41;UBERON:0004121,1.14e-25,171;UBERON:0000924,1.14e-25,171;UBERON:0006601,1.14e-25,171;UBERON:0001893,1.07e-22,34;UBERON:0003528,2.17e-22,34;UBERON:0002020,2.17e-22,34;UBERON:0001869,6.03e-22,32;UBERON:0010371,6.10e-22,104;UBERON:0003056,9.52e-22,61;UBERON:0002791,2.70e-21,32;UBERON:0002619,3.54e-20,22;UBERON:0007023,5.69e-19,114;UBERON:0001950,1.80e-18,20;UBERON:0000956,3.86e-18,25;UBERON:0000203,3.86e-18,25;UBERON:0011216,4.56e-18,223;UBERON:0000025,4.52e-10,192;UBERON:0000119,9.56e-10,309;UBERON:0000483,1.26e-09,306;UBERON:0004111,3.73e-09,240;UBERON:0003076,4.16e-07,15;UBERON:0003057,4.16e-07,15;UBERON:0000922,4.78e-07,592;UBERON:0001871,4.92e-07,6;UBERON:0000200,6.82e-07,6 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0,0.491467873003018,0,0.218441372130172,0,0.618831764800233,0.662794751455832,1.34465029290355,1.20538905604795,0.730310090387373,0.975865597581014,0.123121058076788,0.204000691244253,0,0.85870796139317,1.23186982565596,0.251085279189606,0.382067028739756,0.0821005894499457,0.314843125254717,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0.144846518960824,0.795285947051099,0,3.59232305223458,2.88248216701333,1.66886092816939,1.37528029272598,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0,0,0.516833518338658,2.49036383880697,0.33472061276467,0,0,0,0,0.81014194788176,0.714397826272638,0.22452937262617,0.675668882899933,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.397227542439656,0.286836620748814,1.06400514659507,0,0,0.24666754841716,4.04574346019696,0.538842688278752,0.490385709340376,0.756787138224657,2.88087962239999,0.70296429550139,1.5608003841516,1.71141546463335,1.79338416662161,2.23125547423153,1.61872944368132,1.68540968042698,7.55370433643105,3.93069815397658,4.54633437173368,4.75201142912821,0.741800787835671,0.910161361938026,0,8.41680569770331,5.88057043398232,6.37247465613621,0,0.30648779579902,1.65261864797256,0.340296549480063,0,1.2813443329114,0,0.300091096084402,1.33968288009971,0.257640540045629,0.558350568994769,0.337552664482532,0.194874010322397,0.757301322732344,0.552299391853796,0.161646056818812,0.355009592516614,0,0.508681776931463,0,0,0.286804595389004,3.41526377162867,2.91565490307268,3.71820617182459,2.17688215532278,2.01856680700503,4.01475094983413,3.12899064659632,0,0,1.85747171212792,0,0.709840800239063,0.505754070234305,0.241011029883482,0.55146986366197,0.653638332277218,0.474541238222193,0.539325232640658,0.392442930250692,0.769494313892781,0,0,0.4115740113314,0,0,1.96565443335525,0,0,0,1.88724591328378,0,0,0.201057944823262,0.277765335475589,0.325808305310325,1.03993478527958,0,2.43453850447661,2.23076519048061,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,3.04789892602411,0.381988425558278,0,0,2.05654985406647,1.50171528921959,2.00078502841405,0.560655421726804,0,4.1069440059732,1.68053230485111,0,1.690605505112,0,0,0.514414748524284,0,0.799266537048298,1.42977993658148,0,0,1.62868092146868,0.710783897485092,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,7.13184525203592,0.579125226670317,1.84928690295345,1.61154866915906,0.224170287987055,0,0,0,18.0407183197949,5.20559415430487,3.09315525111078,2.51274398001523,0.637938751653163,0,0,0,1.10422342547226,0.500170521059677,0.271265023699736,0,0,0,0.234282829985426,0.902838299183157,0,0,1.32845119707087,0.737476674166813,5.73431855489347,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.256278298511402,1.02341449813341,0,1.48418066444991,2.62156479464514,0.532685175939381,4.59912073677331,3.11552657510173,2.20799719073923,0,0,0,1.37777337797528,0.910455840033585,0.655622074797121,0.451199612907412,0.539107359730903,0,0,0.73886140225013,0,0.340187410553031,0.215915916102139,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0.512900250232778,0.656029291399411,0.650756789328606,1.23649213977267,0.27470839445503,0.165018999841176,0,1.30012049207304,0,1.64340221096607,0.154048617114644,0.614014698904518,0.137836572484531,2.14840489736547,0.580066775656914,0.852266274161009,0.801288320820636,0,0,0.127612712494584,0,0.464845549297286,0.31481234683064,1.3940745403212,2.7723022215848,0,0,0.37064843820784,0.143124886741991,2.60510858551767,0.316379424718726,0.190630193923825,0.767693373934002,0.855877976067841,2.86382923133343,0,0.719489830333259,0,0.353437207037059,0.404364963146632,0,0,0,0.487426979262569,0,1.22849920267187,0.565621727814851,4.52032466480971,1.65409603063837,0.66343897524122,0.876901770507525,1.15755106853338,1.9676842561399,0.202910376962704,0.30982349809975,1.40847801266121,0.717056761020258,0.392996164052485,0.35667105148125,3.90237170477658,0.211107635297664,0,1.51789269506286,0.699869440489966,0.0962221127255121,0,0,1.22386941009813,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0.146508179271894,3.03401304373784,0.557216921387392,0.568272293612826,0.23874448473769,0,0,2.98244294329889,5.48610724001,0.779160935160341,0.494411622680279,0,0.597743964753209,0,1.0077309914171,0.715880777515084,0,0,0.269605053441981,0,0,0.789147245095469,0,0,1.93866549219044,2.87581104301739,0,0,0,1.44999915086959,0,0,1.18193840883968,1.03423011972439,0,0.520874984799877,1.77148277162768,3.49729672013683,22.8872604475625,30.519875741018,13.2996428529096,3.07139556015562,0,0,0.769502585037971,0.91153644677601,0,0,0,0,1.37396390102793,0,0,0.31396051279005,0.332423363800313,1.57916962432026,0.392125068635479,1.1747511088309,1.13852239634511,0.794682894901893,0.843992258112108,0,0,0.432777279484182,1.99052386215701,0.265372693510018,1.22206028986725,0,0,0,1.61762719153625,0,4.45102446878144,0,1.76098157038881,1.45668227720456,0.394584402849391,1.20990716048664,3.0607276163049,0.505492637027904,0.901940516486955,0.933193722575224,0.664653872707185,0.661983911750998,0.627865836814451,3.58417289318877,1.13843818411917,3.32819215231533,0,0,0,0.52418000472609,0.343972064943233,0,0,0,0.387956065953678,0.176512253383001,1.35588444468319,0.274083849293502,0.397429223405979,4.30513412499975,0,1.28254112402454,1.28071796843612,0.19980960958213,1.58499458869517,1.94712213482057,3.08870996151536,0.864328787928898,7.45515213392595,0,1.08723364858891,1.15063130943567,0,1.73370353940911,0,1.77976992559591,0,0,0.262887354279314,2.79282401272254,2.06244381610515,0,0.599037001496973,1.28767814440971,2.4548860318606,7.79328280846025,0,0,0,0,0.0674035438541849,0.984274815147488,0.338693328263138,2.38568906942791,6.26535668113248,3.05430982083536,2.47570985875021,3.32352270423348,0,0,3.52347428616543,0,0.236417121897595,2.04572893726493,1.5840050477911,2.33073541132698,0.575745591958336,4.2881719582402,2.64836788146173,0,0,0.864221491201268,0.979762080328227,0,0,1.02232813071253,2.03961764736226,0.146552233678082,0,1.55139547633861,2.11572162788304,0.342173675768659,0,3.41719720216623,4.55892484789031,1.65695622138878,0,0,0,0,0,0,0,0,5.81100156125867,4.43034089983493,4.6369980662746,3.254964198369,1.14681839138014,3.54972964917927,1.98708489412427,0.553394539744923,0.874862855734746,0.758245587708239,1.14186133417987,0,0,0.579684114443301,2.38807684618998,0.467426619694449,0.554805861502613,6.25029917407794,1.76097531226803,0,1.83072054717539,1.05861646634267,4.04136721515229,2.06997209985487,1.11507737014592,0,1.24210365501008,4.14706207840855,1.86089200190596,0.521745061811734,0.300515217994437,0.380805212168795,0,0.909243296012797,0.859284456339908,1.39210127963548,0.398095888698616,0,0,0.673498977531838,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0.211312123358627,0,0.213383459388282,0,1.70254786070051,5.8913904080589,0,0,0.895260599125562,2.69562028491704,0,1.63814457288021,0,0.425149840203366,0,0,0,0,0.80057074828547,1.41070377476274,0.3062454773532,4.81719188223446,1.41696576325585,2.87340946302872,3.48697819209284,3.27693205088234,2.90460460349715,4.35984243205998,0,0,0,0,0,0,3.4517996303005,0,0.526472298444801,0,1.56302802246618,0,0.818859587550484,0,4.32240541557726,3.90539049306924,3.30698874401895,4.43910671357348,3.82882366312754,8.22386650285773,0,0,0,0,2.69026977775059,3.03482802118316,3.87025725297206,0.354809480650555,0.576169937778896,4.97315227368514,3.39848664884159,3.485956998831,0,2.66955364540966,1.25588948560822,5.18481446722806,0,0,1.94334832096759,0.9555033757741,0.78624198594322,0,0.581207126840626,13.7348035119038,0,0.62164849248911,0.6828739083758,0,1.29068207646083,3.31329602045583,3.23810938084799,0.423387050190929,0.22910686854405,0.31020638566432,0,0,0,0.121917924982269,0,0.102662806856247,1.1598144313382,0.971421986118279,0.701818390386317,6.36642480516378,1.07028081699812,3.3883824611688,0.109940516745429,0,0.231522474323834,1.31135736302374,4.70317296361523,0.735444965261716,0.471353094203252,1.37415926980462,1.48523200163543,2.5359343655004,0,1.69171052363736,1.03132620757723,0,0,0,0.240724100067505,0.730336388246517,2.2936464170227,1.14671666521161,0.473314686579554,4.35145537221854,4.36350690340377,1.0580536810308,1.11598505450025,0.462175628631418,0,0.883164973845552,1.31118686356435,1.64708051314868,2.03977659483963,5.61156551057677,0.735159196278759,7.27051863947888,1.13668047327359,1.07185652062471,1.65833887891756,2.79269088827117,0.426467963801962,1.42838658878244,0.258355639344024,0.558672428662721,1.00918676322552,1.2729431655633,0.606351566874658,0,0.684466602170562,0.740872583160463,0.78894425931944,1.99596213927608,0.162806537221949,1.28072815053259,0,1.3473780315988,0,0.488965776731466,1.62758471326295,0,0.201273793591026,0 | |||
|short_description=p4@ETV1 | |||
}} |
Latest revision as of 18:07, 16 September 2015
Short description: | p4@ETV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ETV1_5end |
Coexpression cluster: | C4660_lung_cerebellum_rhabdomyosarcoma_mesenchymal_Neural_myxofibrosarcoma_Fibroblast |
Association with transcript: | -11bp_to_ENST00000405192_5end |
EntrezGene: | ETV1 |
HGNC: | 3490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data