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FFCP PHASE1:Mm9::chr2:73498054..73498124,-: Difference between revisions

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{{FFCP|EntrezGene=108699|HGNC=|MCL_coexpression_id=1|UniProt=Q91V57|association_with_transcript=338bp_to_ENSMUST00000102677_5end|description=CAGE_peak_3_at_Chn1_5end|id=chr2:73498054..73498124,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.08e-11!63;UBERON:0002346!1.32e-11!71;UBERON:0003075!1.32e-11!71;UBERON:0007284!1.32e-11!71;UBERON:0000955!5.43e-11!50;UBERON:0006238!5.43e-11!50;UBERON:0004111!6.83e-11!122;UBERON:0000025!7.92e-11!114;UBERON:0001049!8.93e-11!52;UBERON:0005068!8.93e-11!52;UBERON:0006241!8.93e-11!52;UBERON:0007135!8.93e-11!52;UBERON:0002616!2.00e-10!49;UBERON:0004121!2.74e-09!102;UBERON:0000924!2.74e-09!102;UBERON:0006601!2.74e-09!102;UBERON:0003056!3.72e-09!49;UBERON:0000073!8.39e-09!75;UBERON:0001016!8.39e-09!75;UBERON:0001017!1.25e-08!73;UBERON:0005743!1.25e-08!73;UBERON:0002021!1.38e-08!10;UBERON:0000411!1.38e-08!10;UBERON:0001950!1.38e-08!10;UBERON:0003080!4.55e-07!40;UBERON:0002020!8.66e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.11e-29,54;UBERON:0001049,6.04e-26,52;UBERON:0005068,6.04e-26,52;UBERON:0006241,6.04e-26,52;UBERON:0007135,6.04e-26,52;UBERON:0002346,7.19e-23,64;UBERON:0003075,7.19e-23,64;UBERON:0007284,7.19e-23,64;UBERON:0001017,1.48e-22,73;UBERON:0010371,7.02e-22,73;UBERON:0001016,9.99e-22,75;UBERON:0000955,1.81e-21,47;UBERON:0006238,1.81e-21,47;UBERON:0004121,2.79e-20,95;UBERON:0000924,2.79e-20,95;UBERON:0006601,2.79e-20,95;UBERON:0002616,4.12e-20,46;UBERON:0002021,2.93e-19,10;UBERON:0000411,2.93e-19,10;UBERON:0001950,2.93e-19,10;UBERON:0002020,7.12e-19,34;UBERON:0003080,6.45e-16,40;UBERON:0003056,8.05e-15,49;UBERON:0003528,9.53e-15,29;UBERON:0002791,9.53e-15,29;UBERON:0001893,9.53e-15,29;UBERON:0002780,1.35e-14,39;UBERON:0001890,1.35e-14,39;UBERON:0006240,1.35e-14,39;UBERON:0010314,1.50e-14,92;UBERON:0000025,1.04e-12,114;UBERON:0002619,1.05e-12,17;UBERON:0000956,6.41e-12,21;UBERON:0001869,6.41e-12,21;UBERON:0000203,6.41e-12,21;UBERON:0007023,1.19e-11,51;UBERON:0004111,2.60e-11,122;UBERON:0003076,2.77e-11,12;UBERON:0003057,2.77e-11,12;UBERON:0002950,2.79e-08,4;UBERON:0001891,2.79e-08,4;UBERON:0009616,2.79e-08,4;UBERON:0010286,2.79e-08,4;UBERON:0002240,2.40e-07,6;UBERON:0005174,2.40e-07,6;UBERON:0001137,2.40e-07,6;UBERON:0000483,3.10e-07,174;UBERON:0000119,4.73e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.246233781754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.917733760808408,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0.771778308107841,0.573066879877513,0,0.404632921719196,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,2.57085885963423,3.09215957332259,0,0,0,37.4393995397922,42.6475709204527,46.8499926431543,0,0,0,39.6439858581961,29.826418331679,27.8092810953794,2.94628585473668,2.84743361598206,0,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,2.67195850316685,0.173485326766136,0,0,0.301445281105245,0,0.251333182659351,0,9.9773556274739,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,22.5441213698891,14.2423760633149,0.255457055208591,0,0,0,56.9204429738326,108.427642868014,0.628271760564322,95.2557274653675,67.2531652778769,59.8429568331533,45.9142774481754,0.203678727700633,0.746441823660558,0.252722758433675,5.6819301089348,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.476255494059295,0.768682321709099,0.655912071918102,8.53721123438752,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.233530684734339,0.658239399653922,0.492502392237286,0.0810688095458557,0,0.439100230582101,0.805238512562231,62.6664046721099,0.308713837137853,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0.37898282354097,0.814824882210129,0.339490171550376,0.469380496577004,0.670025029767263,0.238043640886014,0.390267295715598,0.945810864637146,0.664394068946325,1.11618338060241,0.983179888294428,0.172684981865896,0.723245292907558,0,0,1.96705709207614,1.10374698521893,76.1009796542134,54.1517992055979,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0.809621403349789,0,0,33.7387382242897,0.99358059645788,0,0,1.31976098378028,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,7.83011093233712,0,0,0,0.354680467284547,0.356737635204141,0.822745103010605,0.304464949114599,0.23467170806371,0,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0,0.291480836629851,67.4948099318255,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.419437377702843,0,0,0.316011120628178,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0,0.549454872801795,0.214368379079066,0.501572104035363,29.3670958160875,26.2385384809091,26.3531936182122,27.8402155396774,64.3977568584404,69.4962385598524,48.60162001669,64.3959320610635,84.7376304800462,63.6845183454738,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0.412070114477788,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0.704276676453562,0.402048282689293,0.952587382566147,0.231768651889711,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.872078499793971,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.619747364743864,0.192906610981141,0,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.927471342481686|short_description=p3@Chn1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108699
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q91V57
|association_with_transcript=338bp_to_ENSMUST00000102677_5end
|cluster_id=chr2:73498054..73498124,-
|description=CAGE_peak_3_at_Chn1_5end
|id=chr2:73498054..73498124,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.08e-11!63;UBERON:0002346!1.32e-11!71;UBERON:0003075!1.32e-11!71;UBERON:0007284!1.32e-11!71;UBERON:0000955!5.43e-11!50;UBERON:0006238!5.43e-11!50;UBERON:0004111!6.83e-11!122;UBERON:0000025!7.92e-11!114;UBERON:0001049!8.93e-11!52;UBERON:0005068!8.93e-11!52;UBERON:0006241!8.93e-11!52;UBERON:0007135!8.93e-11!52;UBERON:0002616!2.00e-10!49;UBERON:0004121!2.74e-09!102;UBERON:0000924!2.74e-09!102;UBERON:0006601!2.74e-09!102;UBERON:0003056!3.72e-09!49;UBERON:0000073!8.39e-09!75;UBERON:0001016!8.39e-09!75;UBERON:0001017!1.25e-08!73;UBERON:0005743!1.25e-08!73;UBERON:0002021!1.38e-08!10;UBERON:0000411!1.38e-08!10;UBERON:0001950!1.38e-08!10;UBERON:0003080!4.55e-07!40;UBERON:0002020!8.66e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.11e-29,54;UBERON:0001049,6.04e-26,52;UBERON:0005068,6.04e-26,52;UBERON:0006241,6.04e-26,52;UBERON:0007135,6.04e-26,52;UBERON:0002346,7.19e-23,64;UBERON:0003075,7.19e-23,64;UBERON:0007284,7.19e-23,64;UBERON:0001017,1.48e-22,73;UBERON:0010371,7.02e-22,73;UBERON:0001016,9.99e-22,75;UBERON:0000955,1.81e-21,47;UBERON:0006238,1.81e-21,47;UBERON:0004121,2.79e-20,95;UBERON:0000924,2.79e-20,95;UBERON:0006601,2.79e-20,95;UBERON:0002616,4.12e-20,46;UBERON:0002021,2.93e-19,10;UBERON:0000411,2.93e-19,10;UBERON:0001950,2.93e-19,10;UBERON:0002020,7.12e-19,34;UBERON:0003080,6.45e-16,40;UBERON:0003056,8.05e-15,49;UBERON:0003528,9.53e-15,29;UBERON:0002791,9.53e-15,29;UBERON:0001893,9.53e-15,29;UBERON:0002780,1.35e-14,39;UBERON:0001890,1.35e-14,39;UBERON:0006240,1.35e-14,39;UBERON:0010314,1.50e-14,92;UBERON:0000025,1.04e-12,114;UBERON:0002619,1.05e-12,17;UBERON:0000956,6.41e-12,21;UBERON:0001869,6.41e-12,21;UBERON:0000203,6.41e-12,21;UBERON:0007023,1.19e-11,51;UBERON:0004111,2.60e-11,122;UBERON:0003076,2.77e-11,12;UBERON:0003057,2.77e-11,12;UBERON:0002950,2.79e-08,4;UBERON:0001891,2.79e-08,4;UBERON:0009616,2.79e-08,4;UBERON:0010286,2.79e-08,4;UBERON:0002240,2.40e-07,6;UBERON:0005174,2.40e-07,6;UBERON:0001137,2.40e-07,6;UBERON:0000483,3.10e-07,174;UBERON:0000119,4.73e-07,176
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.246233781754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.01376931219515,0.917733760808408,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0.771778308107841,0.573066879877513,0,0.404632921719196,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,2.57085885963423,3.09215957332259,0,0,0,37.4393995397922,42.6475709204527,46.8499926431543,0,0,0,39.6439858581961,29.826418331679,27.8092810953794,2.94628585473668,2.84743361598206,0,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,2.67195850316685,0.173485326766136,0,0,0.301445281105245,0,0.251333182659351,0,9.9773556274739,0,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,22.5441213698891,14.2423760633149,0.255457055208591,0,0,0,56.9204429738326,108.427642868014,0.628271760564322,95.2557274653675,67.2531652778769,59.8429568331533,45.9142774481754,0.203678727700633,0.746441823660558,0.252722758433675,5.6819301089348,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.476255494059295,0.768682321709099,0.655912071918102,8.53721123438752,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.233530684734339,0.658239399653922,0.492502392237286,0.0810688095458557,0,0.439100230582101,0.805238512562231,62.6664046721099,0.308713837137853,0,0,0,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47802552133284,0.37898282354097,0.814824882210129,0.339490171550376,0.469380496577004,0.670025029767263,0.238043640886014,0.390267295715598,0.945810864637146,0.664394068946325,1.11618338060241,0.983179888294428,0.172684981865896,0.723245292907558,0,0,1.96705709207614,1.10374698521893,76.1009796542134,54.1517992055979,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0.809621403349789,0,0,33.7387382242897,0.99358059645788,0,0,1.31976098378028,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,7.83011093233712,0,0,0,0.354680467284547,0.356737635204141,0.822745103010605,0.304464949114599,0.23467170806371,0,0.441056796109924,0.32977250588296,0,0,0.119372344003136,0,0.291480836629851,67.4948099318255,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0.419437377702843,0,0,0.316011120628178,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.579568782096571,0,0.549454872801795,0.214368379079066,0.501572104035363,29.3670958160875,26.2385384809091,26.3531936182122,27.8402155396774,64.3977568584404,69.4962385598524,48.60162001669,64.3959320610635,84.7376304800462,63.6845183454738,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0.412070114477788,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0.704276676453562,0.402048282689293,0.952587382566147,0.231768651889711,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.872078499793971,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.619747364743864,0.192906610981141,0,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.927471342481686
|short_description=p3@Chn1
}}

Latest revision as of 23:11, 26 September 2015

Short description:p3@Chn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Chn1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 338bp_to_ENSMUST00000102677_5end
EntrezGene:Chn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Chn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F342.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D746.85
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E439.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H19.98
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B222.54
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A456.92
corpus striatum, adult.CNhs10487.19-21D8108.43
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D595.26
cortex, neonate N30.CNhs11107.1392-42F267.25
diencephalon, adult.CNhs10482.20-12F259.84
diencephalon, neonate N30.CNhs11201.1388-42B245.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E862.67
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C276.10
medulla oblongata, neonate N30.CNhs11200.1396-42A354.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I933.74
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C967.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A464.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A569.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A648.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A764.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A884.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A963.68
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.11e-2954
neural tube6.04e-2652
neural rod6.04e-2652
future spinal cord6.04e-2652
neural keel6.04e-2652
neurectoderm7.19e-2364
neural plate7.19e-2364
presumptive neural plate7.19e-2364
central nervous system1.48e-2273
ecto-epithelium7.02e-2273
nervous system9.99e-2275
brain1.81e-2147
future brain1.81e-2147
ectoderm-derived structure2.79e-2095
ectoderm2.79e-2095
presumptive ectoderm2.79e-2095
regional part of brain4.12e-2046
occipital lobe2.93e-1910
visual cortex2.93e-1910
neocortex2.93e-1910
gray matter7.12e-1934
anterior neural tube6.45e-1640
pre-chordal neural plate8.05e-1549
brain grey matter9.53e-1529
regional part of telencephalon9.53e-1529
telencephalon9.53e-1529
regional part of forebrain1.35e-1439
forebrain1.35e-1439
future forebrain1.35e-1439
structure with developmental contribution from neural crest1.50e-1492
tube1.04e-12114
regional part of cerebral cortex1.05e-1217
cerebral cortex6.41e-1221
cerebral hemisphere6.41e-1221
pallium6.41e-1221
adult organism1.19e-1151
anatomical conduit2.60e-11122
posterior neural tube2.77e-1112
chordal neural plate2.77e-1112
regional part of midbrain2.79e-084
midbrain2.79e-084
presumptive midbrain2.79e-084
midbrain neural tube2.79e-084
spinal cord2.40e-076
dorsal region element2.40e-076
dorsum2.40e-076
epithelium3.10e-07174
cell layer4.73e-07176
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