FFCP PHASE1:Mm9::chr4:82931045..82931073,-: Difference between revisions
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{{FFCP|EntrezGene=69863|HGNC=|MCL_coexpression_id=1|UniProt=E0CX38|association_with_transcript=0bp_to_ENSMUST00000150522_5end|description=CAGE_peak_5_at_Ttc39b_5end|id=chr4:82931045..82931073,-|ontology_enrichment_celltype=CL:0000117!7.70e-12!23;CL:0000337!7.70e-12!23;CL:0000540!3.22e-07!33;CL:0000047!3.22e-07!33;CL:0000031!3.22e-07!33;CL:0000404!3.22e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.64e-16,23;CL:0000337,5.64e-16,23;CL:0000540,4.27e-10,33;CL:0000047,4.27e-10,33;CL:0000031,4.27e-10,33;CL:0000404,4.27e-10,33;CL:0000393,4.89e-08,39;CL:0000211,4.89e-08,39;CL:0002610,2.72e-07,3;CL:0002319,5.41e-07,43;CL:0002614,5.86e-07,3;CL:0000221,9.20e-07,44;CL:0000133,9.20e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.24e-26!63;UBERON:0002346!1.03e-24!71;UBERON:0003075!1.03e-24!71;UBERON:0007284!1.03e-24!71;UBERON:0001049!2.06e-23!52;UBERON:0005068!2.06e-23!52;UBERON:0006241!2.06e-23!52;UBERON:0007135!2.06e-23!52;UBERON:0000955!2.17e-22!50;UBERON:0006238!2.17e-22!50;UBERON:0003056!3.02e-22!49;UBERON:0002616!1.57e-21!49;UBERON:0001017!1.23e-19!73;UBERON:0005743!1.23e-19!73;UBERON:0000073!3.99e-19!75;UBERON:0001016!3.99e-19!75;UBERON:0002020!1.61e-18!34;UBERON:0004121!1.72e-18!102;UBERON:0000924!1.72e-18!102;UBERON:0006601!1.72e-18!102;UBERON:0003080!1.24e-17!40;UBERON:0002780!7.72e-17!39;UBERON:0001890!7.72e-17!39;UBERON:0006240!7.72e-17!39;UBERON:0002791!3.02e-15!29;UBERON:0003528!3.02e-15!29;UBERON:0001893!3.02e-15!29;UBERON:0007811!9.89e-15!86;UBERON:0000956!9.23e-12!21;UBERON:0001869!9.23e-12!21;UBERON:0000203!9.23e-12!21;UBERON:0000153!1.07e-11!94;UBERON:0002619!8.64e-10!17;UBERON:0002021!1.69e-09!10;UBERON:0000411!1.69e-09!10;UBERON:0001950!1.69e-09!10;UBERON:0000025!7.85e-09!114;UBERON:0004111!3.02e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.74e-39,54;UBERON:0001049,1.64e-35,52;UBERON:0005068,1.64e-35,52;UBERON:0006241,1.64e-35,52;UBERON:0007135,1.64e-35,52;UBERON:0001017,4.90e-35,73;UBERON:0001016,7.10e-34,75;UBERON:0002346,3.11e-33,64;UBERON:0003075,3.11e-33,64;UBERON:0007284,3.11e-33,64;UBERON:0004121,1.03e-29,95;UBERON:0000924,1.03e-29,95;UBERON:0006601,1.03e-29,95;UBERON:0010371,3.93e-28,73;UBERON:0000955,4.59e-28,47;UBERON:0006238,4.59e-28,47;UBERON:0002020,8.90e-28,34;UBERON:0002616,2.53e-26,46;UBERON:0003056,2.06e-21,49;UBERON:0002021,2.20e-21,10;UBERON:0000411,2.20e-21,10;UBERON:0001950,2.20e-21,10;UBERON:0003080,2.61e-21,40;UBERON:0010314,1.23e-20,92;UBERON:0003528,1.81e-20,29;UBERON:0002791,1.81e-20,29;UBERON:0001893,1.81e-20,29;UBERON:0002780,9.94e-20,39;UBERON:0001890,9.94e-20,39;UBERON:0006240,9.94e-20,39;UBERON:0002619,1.96e-16,17;UBERON:0003076,2.14e-15,12;UBERON:0003057,2.14e-15,12;UBERON:0000956,2.47e-15,21;UBERON:0001869,2.47e-15,21;UBERON:0000203,2.47e-15,21;UBERON:0000025,5.23e-12,114;UBERON:0002240,2.99e-11,6;UBERON:0005174,2.99e-11,6;UBERON:0001137,2.99e-11,6;UBERON:0004111,1.01e-10,122;UBERON:0001948,3.81e-09,5;UBERON:0002315,3.81e-09,5;UBERON:0002950,6.21e-09,4;UBERON:0001891,6.21e-09,4;UBERON:0009616,6.21e-09,4;UBERON:0010286,6.21e-09,4;UBERON:0011216,8.29e-08,194;UBERON:0004684,2.72e-07,3;UBERON:0002275,2.72e-07,3;UBERON:0000483,4.28e-07,174;UBERON:0002038,5.86e-07,3;UBERON:0009663,5.86e-07,3;UBERON:0009661,5.86e-07,3;UBERON:0000125,5.86e-07,3;UBERON:0002308,5.86e-07,3;UBERON:0000119,6.35e-07,176|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,1.61853168687678,0,2.53532561402472,0,0,0,0,0,0,0,0.829516898467821,0.675029691658453,0.210324961351382,1.42825492201902,1.32521124570968,1.10241719293459,0.479227355091182,0.919218786610021,3.30347642998166,7.40586560894089,8.29475279583715,0.659431438650969,1.46380229763855,0,6.14202597803038,5.6276261003168,5.04234217663473,2.65165726926301,2.42031857358475,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.60289056221049,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,5.85561594023094,3.56059401582874,0,0,0,0,7.48953197024113,6.40500843946077,0.502617408451458,12.5153510538439,7.92717917724025,5.40248915854856,6.00292673350703,0,0,0,1.26265113531884,0.130120442962704,0.459804208866946,0.720248519221397,0.753524089178575,0.884474488967262,1.2811372028485,0.937017245597288,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0.621377317606506,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0,0.16455984991348,0.656669856316381,0.162137619091711,0.146199987425332,0.658650345873152,0,5.04695876553905,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,9.9541365792431,7.73597131508541,0,0,0,0,0,0,0.222798674082394,0,0,0,0,8.03303291054518,0.141940085208269,0,0,0,1.32745138339963,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0.712994756769443,0.948110273807448,0,0,1.70219802876894,0,0,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,9.82754100655701,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,3.95326289831947,7.82552902062201,5.15605962095457,6.53042092906013,6.85082519770642,9.06472676867641,6.07520250208625,11.7083512838297,8.15656336171568,11.39072685854,0.207574695168353,0,0.682934423016537,0.486213434136588,0,0.551530525350042,0,0,0.64183841918363,0.252697211763798,0.50695859978048,0,0,0.640251524048693,0.34461281373368,0,0.579421629724277,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.423073039458382,0.548783918618318,0.789209134313529,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p5@Ttc39b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69863 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E0CX38 | |||
|association_with_transcript=0bp_to_ENSMUST00000150522_5end | |||
|cluster_id=chr4:82931045..82931073,- | |||
|description=CAGE_peak_5_at_Ttc39b_5end | |||
|id=chr4:82931045..82931073,- | |||
|ontology_enrichment_celltype=CL:0000117!7.70e-12!23;CL:0000337!7.70e-12!23;CL:0000540!3.22e-07!33;CL:0000047!3.22e-07!33;CL:0000031!3.22e-07!33;CL:0000404!3.22e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.64e-16,23;CL:0000337,5.64e-16,23;CL:0000540,4.27e-10,33;CL:0000047,4.27e-10,33;CL:0000031,4.27e-10,33;CL:0000404,4.27e-10,33;CL:0000393,4.89e-08,39;CL:0000211,4.89e-08,39;CL:0002610,2.72e-07,3;CL:0002319,5.41e-07,43;CL:0002614,5.86e-07,3;CL:0000221,9.20e-07,44;CL:0000133,9.20e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.24e-26!63;UBERON:0002346!1.03e-24!71;UBERON:0003075!1.03e-24!71;UBERON:0007284!1.03e-24!71;UBERON:0001049!2.06e-23!52;UBERON:0005068!2.06e-23!52;UBERON:0006241!2.06e-23!52;UBERON:0007135!2.06e-23!52;UBERON:0000955!2.17e-22!50;UBERON:0006238!2.17e-22!50;UBERON:0003056!3.02e-22!49;UBERON:0002616!1.57e-21!49;UBERON:0001017!1.23e-19!73;UBERON:0005743!1.23e-19!73;UBERON:0000073!3.99e-19!75;UBERON:0001016!3.99e-19!75;UBERON:0002020!1.61e-18!34;UBERON:0004121!1.72e-18!102;UBERON:0000924!1.72e-18!102;UBERON:0006601!1.72e-18!102;UBERON:0003080!1.24e-17!40;UBERON:0002780!7.72e-17!39;UBERON:0001890!7.72e-17!39;UBERON:0006240!7.72e-17!39;UBERON:0002791!3.02e-15!29;UBERON:0003528!3.02e-15!29;UBERON:0001893!3.02e-15!29;UBERON:0007811!9.89e-15!86;UBERON:0000956!9.23e-12!21;UBERON:0001869!9.23e-12!21;UBERON:0000203!9.23e-12!21;UBERON:0000153!1.07e-11!94;UBERON:0002619!8.64e-10!17;UBERON:0002021!1.69e-09!10;UBERON:0000411!1.69e-09!10;UBERON:0001950!1.69e-09!10;UBERON:0000025!7.85e-09!114;UBERON:0004111!3.02e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.74e-39,54;UBERON:0001049,1.64e-35,52;UBERON:0005068,1.64e-35,52;UBERON:0006241,1.64e-35,52;UBERON:0007135,1.64e-35,52;UBERON:0001017,4.90e-35,73;UBERON:0001016,7.10e-34,75;UBERON:0002346,3.11e-33,64;UBERON:0003075,3.11e-33,64;UBERON:0007284,3.11e-33,64;UBERON:0004121,1.03e-29,95;UBERON:0000924,1.03e-29,95;UBERON:0006601,1.03e-29,95;UBERON:0010371,3.93e-28,73;UBERON:0000955,4.59e-28,47;UBERON:0006238,4.59e-28,47;UBERON:0002020,8.90e-28,34;UBERON:0002616,2.53e-26,46;UBERON:0003056,2.06e-21,49;UBERON:0002021,2.20e-21,10;UBERON:0000411,2.20e-21,10;UBERON:0001950,2.20e-21,10;UBERON:0003080,2.61e-21,40;UBERON:0010314,1.23e-20,92;UBERON:0003528,1.81e-20,29;UBERON:0002791,1.81e-20,29;UBERON:0001893,1.81e-20,29;UBERON:0002780,9.94e-20,39;UBERON:0001890,9.94e-20,39;UBERON:0006240,9.94e-20,39;UBERON:0002619,1.96e-16,17;UBERON:0003076,2.14e-15,12;UBERON:0003057,2.14e-15,12;UBERON:0000956,2.47e-15,21;UBERON:0001869,2.47e-15,21;UBERON:0000203,2.47e-15,21;UBERON:0000025,5.23e-12,114;UBERON:0002240,2.99e-11,6;UBERON:0005174,2.99e-11,6;UBERON:0001137,2.99e-11,6;UBERON:0004111,1.01e-10,122;UBERON:0001948,3.81e-09,5;UBERON:0002315,3.81e-09,5;UBERON:0002950,6.21e-09,4;UBERON:0001891,6.21e-09,4;UBERON:0009616,6.21e-09,4;UBERON:0010286,6.21e-09,4;UBERON:0011216,8.29e-08,194;UBERON:0004684,2.72e-07,3;UBERON:0002275,2.72e-07,3;UBERON:0000483,4.28e-07,174;UBERON:0002038,5.86e-07,3;UBERON:0009663,5.86e-07,3;UBERON:0009661,5.86e-07,3;UBERON:0000125,5.86e-07,3;UBERON:0002308,5.86e-07,3;UBERON:0000119,6.35e-07,176 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,1.61853168687678,0,2.53532561402472,0,0,0,0,0,0,0,0.829516898467821,0.675029691658453,0.210324961351382,1.42825492201902,1.32521124570968,1.10241719293459,0.479227355091182,0.919218786610021,3.30347642998166,7.40586560894089,8.29475279583715,0.659431438650969,1.46380229763855,0,6.14202597803038,5.6276261003168,5.04234217663473,2.65165726926301,2.42031857358475,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0.304465478312141,0,0.60289056221049,0.117588707135705,0,0,0,0,0,0,0.484875253135222,0,5.85561594023094,3.56059401582874,0,0,0,0,7.48953197024113,6.40500843946077,0.502617408451458,12.5153510538439,7.92717917724025,5.40248915854856,6.00292673350703,0,0,0,1.26265113531884,0.130120442962704,0.459804208866946,0.720248519221397,0.753524089178575,0.884474488967262,1.2811372028485,0.937017245597288,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0.621377317606506,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0,0.16455984991348,0.656669856316381,0.162137619091711,0.146199987425332,0.658650345873152,0,5.04695876553905,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,9.9541365792431,7.73597131508541,0,0,0,0,0,0,0.222798674082394,0,0,0,0,8.03303291054518,0.141940085208269,0,0,0,1.32745138339963,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0.712994756769443,0.948110273807448,0,0,1.70219802876894,0,0,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,9.82754100655701,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,3.95326289831947,7.82552902062201,5.15605962095457,6.53042092906013,6.85082519770642,9.06472676867641,6.07520250208625,11.7083512838297,8.15656336171568,11.39072685854,0.207574695168353,0,0.682934423016537,0.486213434136588,0,0.551530525350042,0,0,0.64183841918363,0.252697211763798,0.50695859978048,0,0,0.640251524048693,0.34461281373368,0,0.579421629724277,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.423073039458382,0.548783918618318,0.789209134313529,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p5@Ttc39b | |||
}} |
Latest revision as of 05:59, 27 September 2015
Short description: | p5@Ttc39b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ttc39b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000150522_5end |
EntrezGene: | Ttc39b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.64e-16 | 23 |
neuroblast (sensu Vertebrata) | 5.64e-16 | 23 |
neuron | 4.27e-10 | 33 |
neuronal stem cell | 4.27e-10 | 33 |
neuroblast | 4.27e-10 | 33 |
electrically signaling cell | 4.27e-10 | 33 |
electrically responsive cell | 4.89e-08 | 39 |
electrically active cell | 4.89e-08 | 39 |
raphe nuclei neuron | 2.72e-07 | 3 |
neural cell | 5.41e-07 | 43 |
neuron of the substantia nigra | 5.86e-07 | 3 |
ectodermal cell | 9.20e-07 | 44 |
neurectodermal cell | 9.20e-07 | 44 |