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FFCP PHASE1:Mm9::chr10:79256298..79256366,+: Difference between revisions

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(Created page with "{{FFCP |id=chr10:79256298..79256366,+ |short_description=p1@Palm |description=CAGE_peak_1_at_Palm_5end |association_with_transcript=0bp_to_ENSMUST00000046945,ENSMUST000001...")
 
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{{FFCP
{{FFCP
|id=chr10:79256298..79256366,+
|DHSsupport=NA
|short_description=p1@Palm
|DPIdataset=NA
|description=CAGE_peak_1_at_Palm_5end
|association_with_transcript=0bp_to_ENSMUST00000046945,ENSMUST00000105379,NM_001161747,NM_023128,uc007fzv.2,uc007fzw.2,uc007fzx.2_5end
|EntrezGene=18483
|EntrezGene=18483
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q9Z0P4,Q3TRX4,Q542N8,Q8CB16,Q3UZP7
|UniProt=Q9Z0P4,Q3TRX4,Q542N8,Q8CB16,Q3UZP7
|association_with_transcript=0bp_to_ENSMUST00000046945,ENSMUST00000105379,NM_001161747,NM_023128,uc007fzv.2,uc007fzw.2,uc007fzx.2_5end
|cluster_id=chr10:79256298..79256366,+
|description=CAGE_peak_1_at_Palm_5end
|id=chr10:79256298..79256366,+
|ontology_enrichment_celltype=CL:0002319!3.78e-16!43;CL:0000221!6.95e-16!44;CL:0000133!6.95e-16!44;CL:0000540!1.15e-15!33;CL:0000047!1.15e-15!33;CL:0000031!1.15e-15!33;CL:0000404!1.15e-15!33;CL:0000393!4.19e-14!39;CL:0000211!4.19e-14!39;CL:0000055!4.66e-14!50;CL:0000117!7.76e-14!23;CL:0000337!7.76e-14!23
|ontology_enrichment_celltype_v019_2=CL:0002319,3.74e-16,43;CL:0000221,6.89e-16,44;CL:0000133,6.89e-16,44;CL:0000540,1.14e-15,33;CL:0000047,1.14e-15,33;CL:0000031,1.14e-15,33;CL:0000404,1.14e-15,33;CL:0000393,4.16e-14,39;CL:0000211,4.16e-14,39;CL:0000117,7.70e-14,23;CL:0000337,7.70e-14,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.18e-34!73;UBERON:0005743!2.18e-34!73;UBERON:0000073!8.25e-33!75;UBERON:0001016!8.25e-33!75;UBERON:0004121!9.28e-28!102;UBERON:0000924!9.28e-28!102;UBERON:0006601!9.28e-28!102;UBERON:0002346!3.12e-27!71;UBERON:0003075!3.12e-27!71;UBERON:0007284!3.12e-27!71;UBERON:0001049!1.17e-26!52;UBERON:0005068!1.17e-26!52;UBERON:0006241!1.17e-26!52;UBERON:0007135!1.17e-26!52;UBERON:0000955!2.19e-25!50;UBERON:0006238!2.19e-25!50;UBERON:0002616!9.37e-25!49;UBERON:0000033!8.89e-24!63;UBERON:0003056!2.32e-21!49;UBERON:0002020!5.63e-21!34;UBERON:0003080!7.50e-21!40;UBERON:0002780!1.70e-20!39;UBERON:0001890!1.70e-20!39;UBERON:0006240!1.70e-20!39;UBERON:0002791!3.53e-18!29;UBERON:0003528!3.53e-18!29;UBERON:0001893!3.53e-18!29;UBERON:0000153!5.79e-18!94;UBERON:0007811!6.56e-18!86;UBERON:0000956!1.55e-13!21;UBERON:0001869!1.55e-13!21;UBERON:0000203!1.55e-13!21;UBERON:0002619!3.33e-11!17;UBERON:0002021!8.35e-08!10;UBERON:0000411!8.35e-08!10;UBERON:0001950!8.35e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.14e-34,73;UBERON:0001016,8.10e-33,75;UBERON:0002346,2.00e-28,64;UBERON:0003075,2.00e-28,64;UBERON:0007284,2.00e-28,64;UBERON:0004121,3.59e-28,95;UBERON:0000924,3.59e-28,95;UBERON:0006601,3.59e-28,95;UBERON:0000073,8.25e-28,54;UBERON:0001049,1.15e-26,52;UBERON:0005068,1.15e-26,52;UBERON:0006241,1.15e-26,52;UBERON:0007135,1.15e-26,52;UBERON:0010371,4.66e-24,73;UBERON:0000955,5.62e-24,47;UBERON:0006238,5.62e-24,47;UBERON:0002616,2.36e-23,46;UBERON:0003056,2.29e-21,49;UBERON:0002020,5.56e-21,34;UBERON:0003080,7.41e-21,40;UBERON:0002780,1.68e-20,39;UBERON:0001890,1.68e-20,39;UBERON:0006240,1.68e-20,39;UBERON:0010314,1.07e-19,92;UBERON:0003528,3.50e-18,29;UBERON:0002791,3.50e-18,29;UBERON:0001893,3.50e-18,29;UBERON:0000956,1.54e-13,21;UBERON:0001869,1.54e-13,21;UBERON:0000203,1.54e-13,21;UBERON:0002619,3.31e-11,17;UBERON:0002021,8.32e-08,10;UBERON:0000411,8.32e-08,10;UBERON:0001950,8.32e-08,10
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.8020937227963,23.7215417931714,17.0141362289619,13.3503422490547,4.34937519160848,1.12738587736838,23.3245811828607,27.4661094158782,38.5013352921214,36.8105496911534,30.5810587138308,35.2071715937262,25.1294462748824,22.4398997071021,9.90494895386625,5.76060012515731,34.4452121484714,43.9913717179656,34.9217254360413,34.6888597350713,39.2068463511784,41.7230845040656,36.4192212045506,34.8547284132002,35.1363245819554,42.8282253401099,33.2726410951574,30.699232433022,32.423390632791,42.8938231006358,24.0334206632124,23.5305110576509,32.2969883794113,27.3651924673448,36.8992124601484,30.967608449445,26.3738338944862,18.0069438426415,6.01886524842436,307.225002383684,319.005388899474,272.125368883713,219.456513852889,211.005416089358,223.596593627351,207.906930071396,216.60449875085,178.538109139777,221.083653118027,69.2261608386458,86.9874224014248,51.5615489377485,37.9246478626539,59.110911861091,53.6823044674041,38.0041904540762,40.3828712188233,34.659274635916,37.399187341042,39.5427707828774,35.4617521805823,39.5167161522904,40.3998711674725,38.6540706071277,41.9138448329105,49.2508385265636,39.7392994155232,42.8569336835439,42.6876868389752,37.0298792576249,40.8194354166476,43.872258950307,37.7900683244054,37.1732052640556,34.3535308040207,40.0612260591372,31.5683653725411,42.235079406063,39.8411012876994,42.5899715065785,48.2671963640261,34.7846386694236,36.8749682022599,38.7742288072094,92.1801032591021,34.6218780499204,34.594239701776,29.4584031386019,28.235701647298,23.1867835620421
|phase1_expression=29.6275367143869,0.348975407639361,2.27499619694768,0.90739263392049,2.00358291978539,0.16787927191189,0.700837921786577,0.258246646883153,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0.342401459862411,0.437102012094987,0.999329285446988,1.21485160433896,2.09868563438444,5.99378114180652,3.97631857456642,2.54633791078818,42.2665152050817,37.8298524075373,26.1199789138935,1.43993180514066,1.60586496747019,0,0.430761996159075,0.215471232685889,2.85035129184561,2.26827116783938,0.665191531965914,6.98533740805594,9.84103660135312,0,0,0,0.204169356262369,115.09619845265,82.8215465195228,99.4695113550217,121.175686534389,140.024324416481,120.406567551726,31.3483076759187,29.6020639160983,32.4877751326176,70.4152209913235,66.2796475396557,63.9286791757313,60.8565584102507,45.4955870282428,41.6882436658418,3.02008690903925,0.725362142011344,1.00828139742739,46.0494390504345,39.5416147115484,21.6582278756526,236.103309823151,230.640066962606,193.952409472891,64.7193056252042,41.7968554172235,9.44894703145469,6.92206453796882,8.5257613793532,42.5432156936135,60.3222739354841,179.383029293666,212.364340995749,209.273336544625,139.397680389056,119.931617736726,207.499413870132,224.565938595728,167.297819163024,69.3730050296149,84.4013304743091,81.1042495592965,232.251752692871,264.033339436554,215.658135410499,87.6634616864336,77.0984775743402,101.763633019356,146.430406980413,144.222512649491,194.228222549963,9.92013132664711,23.5783267533171,31.8850937571846,3.44169550792555,0.679971333707751,0,0,0,16.1511083151515,41.5849987090461,46.2419088193106,47.7008425588959,32.1122997090832,32.0816193535795,76.4415719119937,92.4386714099331,5.84525810730278,5.32055717497707,2.02209778005913,13.35951392713,6.99132285847364,27.3133535879278,40.2485958097435,29.8376168745898,35.9760175719451,29.9938054699719,37.7459749905612,43.354974008738,9.14621380617183,20.6777080395474,34.4998115260451,24.4267943420588,22.0841518460394,15.0311328471919,11.1835056730873,81.3930615692101,88.8054036889049,10.7291963187608,33.1887894881399,45.592607555499,36.2150147158234,64.5597655834786,168.360221837255,266.135917775047,151.92245584805,177.72224284458,77.2971525761563,116.164744356514,47.8645010096487,18.9098595327341,4.29628689337247,14.0996043443938,49.0554069969393,55.1765050640335,69.1438578452541,51.0889332463074,52.7282868422791,52.6547390370733,52.4729657534481,34.1488449375501,62.0835819646586,55.0298693288354,57.1841153532834,40.1128190342462,30.5851974148158,25.4224081561182,34.1598346437186,33.8358253591438,52.6659890484926,72.0574139921202,68.1992398549422,22.3695834338342,26.5014447778639,23.0479438670099,20.1233025247429,23.4149435779411,19.4376562238097,14.1845706297749,20.1205051049714,19.4998121753173,24.1902979372816,21.1776028662033,25.860950245128,23.9767979377545,21.0768110679409,30.5990634773648,139.842815795145,217.334541345049,1.98251269790279,3.43785736662608,43.5108031091877,34.8355007790658,28.7374438748268,18.7565677899709,18.2349995952794,17.8812088545806,8.54152310780121,17.2933902460211,12.3154252312132,15.3196483471686,15.7920910566487,8.08937467788799,9.07779809473716,9.95706366271836,44.3822888230211,40.9009675142829,33.8123207019241,43.3777328310519,52.5611240224266,58.9140887078676,46.6053278605776,54.172924308514,41.1336666944402,49.9758513883292,1.48226313543574,6.17326891149548,7.07612382407531,6.52100125916076,6.49152388443209,6.99413763282009,8.40265310878685,13.8094145976389,11.8358715545776,4.94210543738547,21.5652309791032,5.95425516269605,4.05648975048929,3.03094653536534,2.69096120282868,4.82443521363367,14.7802552133284,41.1196363541952,26.0743962307241,25.9709981236038,23.7037150771387,17.5881570313907,18.091316707337,17.1717610114863,24.5910824805658,23.2537924131214,27.2667654404303,20.3190510247515,22.6217326244323,20.6848153771562,4.52373851817817,8.70249094109935,10.3270497333998,11.8652800911035,60.0459206554342,65.0524860586728,21.9672826804745,19.1877904675323,59.6310534696725,58.5658116444958,55.5792366150621,50.9003539638936,50.3525003426211,51.2368520727787,61.9360373562588,66.0498238879565,77.4764044775186,171.906904285667,30.9429385754026,53.5977467038438,43.1650442286977,38.6030087755733,9.2921596837974,29.6192376109077,18.7440605318146,14.1453809816924,23.6241514304618,25.2096821314021,20.4158351602895,19.9943551212628,16.7553767840819,12.6414703174326,8.4334886859999,11.3449097573006,48.3424240170379,52.3977783631113,54.7187232401052,45.6537884617292,37.2414490648775,66.1748313303682,55.782117984119,70.635868194587,19.9470951854154,17.3702298108333,6.61585194164886,33.4719093471204,24.3811284310817,23.5220407219808,26.3812880246932,24.9494167612493,9.91034844541493,55.6275906031529,7.51831875510552,30.1324827226305,16.1119238811649,7.72310673719233,5.60446333656203,4.57556346413045,14.6181449794716,17.2140286358099,16.7221968303353,9.54670618015114,51.5627669537251,27.8547669963783,24.5172123665489,24.2542423376784,18.9975430459175,17.8020937227963,23.7215417931714,17.0141362289619,13.3503422490547,4.34937519160848,1.12738587736838,23.3245811828607,27.4661094158782,38.5013352921214,36.8105496911534,30.5810587138308,35.2071715937262,25.1294462748824,22.4398997071021,9.90494895386625,5.76060012515731,34.4452121484714,43.9913717179656,34.9217254360413,34.6888597350713,39.2068463511784,41.7230845040656,36.4192212045506,34.8547284132002,35.1363245819554,42.8282253401099,33.2726410951574,30.699232433022,32.423390632791,42.8938231006358,24.0334206632124,23.5305110576509,32.2969883794113,27.3651924673448,36.8992124601484,30.967608449445,26.3738338944862,18.0069438426415,6.01886524842436,307.225002383684,319.005388899474,272.125368883713,219.456513852889,211.005416089358,223.596593627351,207.906930071396,216.60449875085,178.538109139777,221.083653118027,69.2261608386458,86.9874224014248,51.5615489377485,37.9246478626539,59.110911861091,53.6823044674041,38.0041904540762,40.3828712188233,34.659274635916,37.399187341042,39.5427707828774,35.4617521805823,39.5167161522904,40.3998711674725,38.6540706071277,41.9138448329105,49.2508385265636,39.7392994155232,42.8569336835439,42.6876868389752,37.0298792576249,40.8194354166476,43.872258950307,37.7900683244054,37.1732052640556,34.3535308040207,40.0612260591372,31.5683653725411,42.235079406063,39.8411012876994,42.5899715065785,48.2671963640261,34.7846386694236,36.8749682022599,38.7742288072094,92.1801032591021,34.6218780499204,34.594239701776,29.4584031386019,28.235701647298,23.1867835620421
|short_description=p1@Palm
}}
}}

Latest revision as of 09:01, 26 September 2015

Short description:p1@Palm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Palm_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000046945, ENSMUST00000105379, NM_001161747, NM_023128, uc007fzv.2, uc007fzw.2, uc007fzx.2_5end
EntrezGene:Palm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Palm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.98
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A342.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H237.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I926.12
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8115.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H182.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H399.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9121.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2140.02
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4120.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D929.60
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B332.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B770.42
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C266.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B863.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C360.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C445.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C441.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C146.05
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E139.54
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.66
Mouse Granule cells, donor1.CNhs12131.11713-123C3236.10
Mouse Granule cells, donor2.CNhs12357.11731-123E3230.64
Mouse Granule cells, donor3.CNhs12108.11636-122C7193.95
Mouse Meningeal cells, donor1.CNhs12132.11716-123C664.72
Mouse Meningeal cells, donor3.CNhs12109.11639-122D141.80
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C842.54
Mouse Microglia, donor2.CNhs12634.11736-123E860.32
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5179.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5212.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9209.27
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1139.40
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5119.93
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2207.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2224.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6167.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D369.37
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F384.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D781.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4232.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4264.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8215.66
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E487.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E577.10
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6101.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6146.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6144.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1194.23
Mouse Schwann, donor1.CNhs12507.11728-123D99.92
Mouse Schwann, donor2.CNhs12573.11746-123F923.58
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G331.89
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I741.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E346.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I847.70
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G632.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H132.08
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I876.44
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B692.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.36
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D727.31
adrenal gland, embryo E14.CNhs11038.406-44C540.25
adrenal gland, embryo E16.CNhs11004.1254-43D629.84
adrenal gland, embryo E17.CNhs11043.1263-45I135.98
adrenal gland, embryo E18.CNhs11026.1262-18F529.99
adrenal gland, neonate N00.CNhs11191.1311-23C137.75
adrenal gland, neonate N25.CNhs11223.1377-27I343.35
amnion, adult pregnant day17.5.CNhs10488.583-22A89.15
aorta, adult.CNhs10498.46-23H120.68
bone (os femoris), adult.CNhs10483.56-12G234.50
bone (os femoris), neonate N02.CNhs11227.1985-43F524.43
bone (os femoris), neonate N16.CNhs11225.1525-43A622.08
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B281.39
cerebellum, neonate N30.CNhs11135.1395-42I288.81
colon, adult.CNhs10468.36-18H710.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C733.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D145.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D436.22
corpora quadrigemina, adult.CNhs10501.16-22A464.56
corpus striatum, adult.CNhs10487.19-21D8168.36
corpus striatum, neonate N00.CNhs11226.630-43F1266.14
cortex, adult.CNhs10473.12-14D5151.92
cortex, neonate N30.CNhs11107.1392-42F2177.72
diencephalon, adult.CNhs10482.20-12F277.30
diencephalon, neonate N30.CNhs11201.1388-42B2116.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B147.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.91
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G414.10
eyeball, embryo E12.CNhs11016.345-16C649.06
eyeball, embryo E14.CNhs10521.399-16E255.18
eyeball, embryo E15.CNhs10593.426-16C969.14
eyeball, embryo E17.CNhs11023.1261-18D451.09
eyeball, neonate N00.CNhs11207.633-15C652.73
eyeball, neonate N01.CNhs11140.1532-43E752.65
eyeball, neonate N02.CNhs11205.1551-44G852.47
eyeball, neonate N16.CNhs11188.777-19A234.15
forelimb, embryo E11.CNhs10596.335-25E262.08
forelimb, embryo E12.CNhs10600.359-14H255.03
forelimb, embryo E13.CNhs10589.384-1E257.18
forelimb, embryo E14.CNhs10577.413-26A840.11
forelimb, embryo E15.CNhs11007.437-20E730.59
forelimb, embryo E17.CNhs10598.1517-43C425.42
forelimb, embryo E18.CNhs11008.1520-43B534.16
gonad, embryo E13.CNhs11044.1564-45I633.84
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C852.67
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D272.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D568.20
heart, embryo E11.CNhs10586.331-24E922.37
heart, embryo E12.CNhs11015.353-12F526.50
heart, embryo E13.CNhs11013.376-3I923.05
heart, embryo E14.CNhs10597.403-26D420.12
heart, embryo E15.CNhs11017.431-16C823.41
heart, embryo E16.CNhs11021.457-17C619.44
heart, embryo E17.CNhs11025.479-18E514.18
heart, embryo E18.CNhs11030.1283-20G320.12
heart, neonate N00.CNhs11213.639-21E319.50
heart, neonate N03.CNhs11221.1349-25I224.19
heart, neonate N10.CNhs11118.749-24G121.18
heart, neonate N16.CNhs11209.782-15G125.86
heart, neonate N20.CNhs11127.821-26I623.98
heart, neonate N25.CNhs11196.1351-25D321.08
heart, neonate N30.CNhs11202.1390-42D230.60
hippocampus, adult.CNhs10478.13-16E8139.84
hippocampus, neonate N00.CNhs11228.627-43G1217.33
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I543.51
intestine, embryo E13.CNhs11010.381-16D534.84
intestine, embryo E15.CNhs10602.976-16D828.74
intestine, embryo E16.CNhs10585.463-22H418.76
intestine, embryo E17.CNhs10582.482-18D318.23
intestine, embryo E18.CNhs10526.1289-20F717.88
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E917.29
intestine, neonate N06.CNhs11102.688-20B812.32
intestine, neonate N07.CNhs11095.720-20F215.32
intestine, neonate N10.CNhs11098.755-23A515.79
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G19.96
kidney, embryo E14.CNhs10606.411-4I944.38
kidney, embryo E15.CNhs10997.434-16F840.90
kidney, embryo E16.CNhs10584.464-22A533.81
kidney, embryo E17.CNhs11028.483-18I243.38
kidney, embryo E18.CNhs11001.1288-20C752.56
kidney, neonate N00.CNhs11214.646-21G758.91
kidney, neonate N10.CNhs11206.758-6D546.61
kidney, neonate N20.CNhs11113.832-19I154.17
kidney, neonate N25.CNhs11122.1353-25F341.13
kidney, neonate N30.CNhs11203.1385-42H149.98
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F86.17
liver, embryo E13.CNhs10524.378-3H67.08
liver, embryo E14.CNhs10594.409-16E16.52
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F56.99
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G413.81
liver, neonate N00.CNhs11117.641-24F411.84
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B114.78
lung, embryo E12.CNhs10522.354-16G241.12
lung, embryo E14.CNhs10604.404-26F826.07
lung, embryo E15.CNhs11020.432-17C525.97
lung, embryo E16.CNhs10998.458-17B623.70
lung, embryo E17.CNhs10605.480-44A617.59
lung, embryo E18.CNhs10583.1287-20I618.09
lung, neonate N00.CNhs11224.640-42C617.17
lung, neonate N06.CNhs11212.683-20E524.59
lung, neonate N07.CNhs11111.715-19A323.25
lung, neonate N10.CNhs11219.750-23E627.27
lung, neonate N20.CNhs11109.822-18A420.32
lung, neonate N25.CNhs11119.1359-25C722.62
lung, neonate N30.CNhs11133.1394-42H220.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H211.87
medulla oblongata, adult.CNhs10477.17-12C260.05
medulla oblongata, neonate N30.CNhs11200.1396-42A365.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E159.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E258.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E355.58
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D750.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D850.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D951.24
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D461.94
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D566.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D677.48
olfactory brain, adult.CNhs10489.18-22I9171.91
ovary, adult.CNhs10507.91-2I730.94
ovary, embryo E18.CNhs11040.505-44H753.60
ovary, neonate N00.CNhs11217.1299-22I443.17
oviduct, adult pregnant day01.CNhs10500.988-6G638.60
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F429.62
pancreas, embryo E15.CNhs11042.1556-45F218.74
pancreas, embryo E16.CNhs11003.460-26E514.15
pancreas, embryo E17.CNhs10599.1558-45G323.62
pancreas, embryo E18.CNhs10580.1535-43I725.21
pancreas, neonate N00.CNhs11105.645-26G920.42
pancreas, neonate N01.CNhs11138.1531-43D719.99
pancreas, neonate N02.CNhs11139.1539-43D816.76
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G848.34
pituitary gland, embryo E12.CNhs11018.346-16E652.40
pituitary gland, embryo E13.CNhs11009.370-44C754.72
pituitary gland, embryo E14.CNhs11037.398-44A545.65
pituitary gland, embryo E15.CNhs10592.427-16B937.24
pituitary gland, embryo E16.CNhs11036.449-43F666.17
pituitary gland, embryo E17.CNhs11039.1265-44F555.78
pituitary gland, neonate N00.CNhs11190.1308-22E970.64
placenta, adult pregnant day10.CNhs10472.539-13I719.95
placenta, adult pregnant day17.CNhs10464.577-18G317.37
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C333.47
skin, neonate N00.CNhs11124.650-25G424.38
skin, neonate N03.CNhs11215.662-22H323.52
skin, neonate N06.CNhs11097.693-20I526.38
skin, neonate N10.CNhs11108.762-6C424.95
small intestine, neonate N16.CNhs11114.790-21I19.91
spinal cord, adult.CNhs10505.24-13C955.63
spleen, adult.CNhs10465.25-2G27.52
spleen, embryo E16.CNhs11035.461-43C130.13
spleen, embryo E18.CNhs11011.1271-21F216.11
spleen, neonate N10.CNhs11116.752-24D17.72
spleen, neonate N20.CNhs11112.824-19H15.60
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.72
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E351.56
stomach, embryo E15.CNhs10603.1252-16G827.85
stomach, embryo E16.CNhs11022.459-17D424.52
stomach, embryo E17.CNhs11006.1035-18D524.25
stomach, embryo E18.CNhs10999.1286-20C619.00
stomach, neonate N03.CNhs11193.1340-24B817.80
stomach, neonate N07.CNhs11210.718-18A923.72
stomach, neonate N25.CNhs11104.1355-25E417.01
stomach, neonate N30.CNhs11134.1386-42I113.35
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F523.32
testis, embryo E15.CNhs11034.443-27C527.47
testis, embryo E16.CNhs11033.470-26G538.50
testis, embryo E17.CNhs11029.486-18I536.81
testis, embryo E18.CNhs11027.503-18G530.58
testis, neonate N00.CNhs11189.1300-22B735.21
testis, neonate N07.CNhs11222.726-26I425.13
testis, neonate N10.CNhs11204.763-44D922.44
testis, neonate N20.CNhs11110.839-18H39.90
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B534.45
thymus, embryo E14.CNhs11041.402-44I443.99
thymus, embryo E15.CNhs11005.430-45I234.92
thymus, embryo E16.CNhs11002.456-26C534.69
thymus, embryo E17.CNhs10581.478-18C139.21
thymus, embryo E18.CNhs10595.1273-19G441.72
thymus, neonate N02.CNhs11181.1541-43F836.42
thymus, neonate N03.CNhs11137.2104-43C734.85
thymus, neonate N06.CNhs11197.681-26C435.14
thymus, neonate N07.CNhs11211.713-19D342.83
thymus, neonate N10.CNhs11194.748-24E433.27
thymus, neonate N20.CNhs11186.820-7A230.70
thymus, neonate N25.CNhs11125.1362-25G732.42
thymus, neonate N30.CNhs11132.1393-42G242.89
tongue, adult.CNhs10499.32-1B424.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F732.30
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G527.37
urinary bladder, adult.CNhs10481.879-12E436.90
uterus, adult pregnant day19.CNhs10497.590-15F530.97
uterus, adult.CNhs10509.92-27E526.37
vagina, adult.CNhs10502.89-27D518.01
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1307.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2319.01
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3272.13
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7219.46
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4211.01
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5223.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6207.91
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7216.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8178.54
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9221.08
whole body, embryo E11.CNhs11014.324-5I869.23
whole body, embryo E12.CNhs10587.857-27C986.99
whole body, embryo E13.CNhs10512.372-23H251.56
whole body, embryo E14.5.CNhs10578.420-27D237.92
whole body, embryo E14.CNhs10519.395-14B159.11
whole body, embryo E16.CNhs10514.453-14F253.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G538.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G540.38
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G537.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G539.54
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G535.46
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G539.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G540.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G538.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G541.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G549.25
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G539.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G542.86
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G542.69
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G540.82
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G543.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.79
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G537.17
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G534.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G540.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G531.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G542.24
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G539.84
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G542.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G548.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G534.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G536.87
whole body, embryo E17.5.CNhs10513.490-9F938.77
whole body, embryo E17.CNhs10517.475-3I592.18
whole body, embryo E18.CNhs10516.493-3B334.62
whole body, neonate N00.CNhs10525.657-19C234.59
whole body, neonate N01.CNhs10576.659-23C629.46
whole body, neonate N06.CNhs10515.692-21D128.24
whole body, neonate N10.CNhs10518.761-6B423.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell3.74e-1643
ectodermal cell6.89e-1644
neurectodermal cell6.89e-1644
neuron1.14e-1533
neuronal stem cell1.14e-1533
neuroblast1.14e-1533
electrically signaling cell1.14e-1533
electrically responsive cell4.16e-1439
electrically active cell4.16e-1439
CNS neuron (sensu Vertebrata)7.70e-1423
neuroblast (sensu Vertebrata)7.70e-1423

Uber anatomy
Ontology termp-valuen
central nervous system2.14e-3473
nervous system8.10e-3375
neurectoderm2.00e-2864
neural plate2.00e-2864
presumptive neural plate2.00e-2864
ectoderm-derived structure3.59e-2895
ectoderm3.59e-2895
presumptive ectoderm3.59e-2895
regional part of nervous system8.25e-2854
neural tube1.15e-2652
neural rod1.15e-2652
future spinal cord1.15e-2652
neural keel1.15e-2652
ecto-epithelium4.66e-2473
brain5.62e-2447
future brain5.62e-2447
regional part of brain2.36e-2346
pre-chordal neural plate2.29e-2149
gray matter5.56e-2134
anterior neural tube7.41e-2140
regional part of forebrain1.68e-2039
forebrain1.68e-2039
future forebrain1.68e-2039
structure with developmental contribution from neural crest1.07e-1992
brain grey matter3.50e-1829
regional part of telencephalon3.50e-1829
telencephalon3.50e-1829
cerebral cortex1.54e-1321
cerebral hemisphere1.54e-1321
pallium1.54e-1321
regional part of cerebral cortex3.31e-1117
occipital lobe8.32e-0810
visual cortex8.32e-0810
neocortex8.32e-0810
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