FFCP PHASE1:Mm9::chr10:79601904..79601917,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:79601904..79601917,-
|short_description=p2@Dos
|description=CAGE_peak_2_at_Dos_5end
|association_with_transcript=5bp_to_ENSMUST00000123967_5end
|EntrezGe...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100503659 | |EntrezGene=100503659 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q5J1 | |UniProt=E9Q5J1 | ||
|association_with_transcript=5bp_to_ENSMUST00000123967_5end | |||
|cluster_id=chr10:79601904..79601917,- | |||
|description=CAGE_peak_2_at_Dos_5end | |||
|id=chr10:79601904..79601917,- | |||
|ontology_enrichment_celltype=CL:0000221!1.22e-11!44;CL:0000133!1.22e-11!44;CL:0002319!2.71e-11!43;CL:0000055!8.27e-11!50;CL:0000393!2.79e-10!39;CL:0000211!2.79e-10!39;CL:0000540!3.90e-10!33;CL:0000047!3.90e-10!33;CL:0000031!3.90e-10!33;CL:0000404!3.90e-10!33;CL:0000117!6.15e-10!23;CL:0000337!6.15e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.06e-11,44;CL:0000133,1.06e-11,44;CL:0002319,2.79e-11,43;CL:0000117,2.04e-10,23;CL:0000337,2.04e-10,23;CL:0000540,6.96e-10,33;CL:0000047,6.96e-10,33;CL:0000031,6.96e-10,33;CL:0000404,6.96e-10,33;CL:0000393,2.88e-09,39;CL:0000211,2.88e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.69e-29!73;UBERON:0005743!1.69e-29!73;UBERON:0000073!9.45e-29!75;UBERON:0001016!9.45e-29!75;UBERON:0004121!7.41e-27!102;UBERON:0000924!7.41e-27!102;UBERON:0006601!7.41e-27!102;UBERON:0001049!2.15e-23!52;UBERON:0005068!2.15e-23!52;UBERON:0006241!2.15e-23!52;UBERON:0007135!2.15e-23!52;UBERON:0000955!1.35e-22!50;UBERON:0006238!1.35e-22!50;UBERON:0002616!5.80e-22!49;UBERON:0002346!8.23e-22!71;UBERON:0003075!8.23e-22!71;UBERON:0007284!8.23e-22!71;UBERON:0000033!7.97e-20!63;UBERON:0003080!1.92e-19!40;UBERON:0002780!9.02e-19!39;UBERON:0001890!9.02e-19!39;UBERON:0006240!9.02e-19!39;UBERON:0002020!3.53e-17!34;UBERON:0003056!2.22e-16!49;UBERON:0007811!1.62e-15!86;UBERON:0002791!1.35e-14!29;UBERON:0003528!1.35e-14!29;UBERON:0001893!1.35e-14!29;UBERON:0000153!1.99e-14!94;UBERON:0002619!1.43e-10!17;UBERON:0000956!2.50e-10!21;UBERON:0001869!2.50e-10!21;UBERON:0000203!2.50e-10!21;UBERON:0002021!7.08e-08!10;UBERON:0000411!7.08e-08!10;UBERON:0001950!7.08e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.16e-33,73;UBERON:0001016,5.22e-32,75;UBERON:0004121,1.10e-29,95;UBERON:0000924,1.10e-29,95;UBERON:0006601,1.10e-29,95;UBERON:0000073,5.86e-29,54;UBERON:0001049,3.24e-27,52;UBERON:0005068,3.24e-27,52;UBERON:0006241,3.24e-27,52;UBERON:0007135,3.24e-27,52;UBERON:0010371,7.51e-26,73;UBERON:0000955,9.28e-24,47;UBERON:0006238,9.28e-24,47;UBERON:0002346,9.40e-24,64;UBERON:0003075,9.40e-24,64;UBERON:0007284,9.40e-24,64;UBERON:0002616,5.59e-23,46;UBERON:0003080,2.49e-22,40;UBERON:0002780,1.74e-21,39;UBERON:0001890,1.74e-21,39;UBERON:0006240,1.74e-21,39;UBERON:0002020,2.04e-19,34;UBERON:0003056,7.26e-18,49;UBERON:0003528,3.80e-16,29;UBERON:0002791,3.80e-16,29;UBERON:0001893,3.80e-16,29;UBERON:0010314,6.88e-15,92;UBERON:0002619,4.03e-13,17;UBERON:0000956,8.58e-11,21;UBERON:0001869,8.58e-11,21;UBERON:0000203,8.58e-11,21;UBERON:0002021,1.15e-09,10;UBERON:0000411,1.15e-09,10;UBERON:0001950,1.15e-09,10;UBERON:0004111,2.20e-07,122 | |||
|phase1_expression=2.24208385946712,0,0.454999239389536,0,0.500895729946347,0.671517087647559,0.467225281191051,0.774739940649458,40.4063632575284,85.4335521075276,2.91070545983358,0.8774937489487,0.684802919724823,0.786783621770977,0,0,0,0.157731082679119,0,0,7.73893940374735,0,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0,1.27006134691926,0.61506478758457,0,1.44425809875637,0.332469290716985,0.816677425049476,0,0,0,0,0,0,2.26614272356039,2.12891555560981,3.12029478674859,0,4.14247797122848,7.24964403023757,7.97162586204562,1.67983705950435,5.75010257459886,0.838913030288682,9.42970784614748,1.68046899571232,0.771778308107841,0.573066879877513,0.515672092277442,3.64169629547276,6.87688273053643,5.70448263155561,2.03306719241479,1.77858959222228,0,0,0.7104801149461,2.99600110518405,9.22123932771731,0.933206510776299,0.675029691658453,0.841299845405528,11.4260393761521,11.7060326704355,3.91970557487853,2.58782771749238,7.35375029288017,24.2254938198655,28.0912143787413,31.3357327842737,5.67111037239834,7.04454855738554,7.8137005583514,22.0554569211091,30.3891809417107,28.7260705820403,10.3120004915784,9.11178757114259,10.9975673036927,0.454357159999104,0.68014404096107,4.34796733052517,0,0,0,0,0,1.96622188184453,1.36344258062446,0.779358013808606,0.70667914902068,3.38024207464033,0,0,0,0.432982082022428,0,0,1.82694207550496,0.517875767294343,34.5870184021042,0.346970653532272,0.913396434936424,0.691846491768175,0.753613202763113,3.99801604261396,3.14166478324189,0,0.722996784599558,0,0,0,0,0,4.68449275218475,0.83778682725382,0.255457055208591,0.11981512450592,0.599902730993408,0.381210681219194,31.6058249144176,42.0900554593136,16.5863744788981,37.0245802009549,41.1701886301832,27.6358099264215,28.0677385107221,0.81471491080253,0.746441823660558,2.0217820674694,1.89397670297827,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,1.42876648217788,0.512454881139399,0.468508622798644,1.81092359517311,0.215567992932842,0.567318240503458,0.351902248327898,0,0.834141747676794,2.43776516565517,1.85203922767149,0.796137067273973,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,25.2347938276953,4.52780294468852,0.330418782983798,0,0,0.232236671860439,0.902072229254653,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.648414149624083,0.199141273254367,0.948339504765408,0.456994050438915,1.1270773567308,0.203651327845314,0,0.280543279561274,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0.393117990226406,0,0,0.482354319504834,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0.482443521363367,1.10851914099963,0.37898282354097,0.488894929326078,0,0.704070744865506,0.335012514883631,1.19021820443007,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,20.5504755184374,16.8784828692773,0,0.252470927204373,2.2085575359138,1.95219372148319,1.50796378412959,0.716906393857656,0.891194696329576,0.283076530788832,2.02405350837447,1.75353514746787,1.18586333383957,27.3123118958536,2.41298144854057,0.890328018336276,0.651547837414304,1.97964147567043,0,1.21390318077491,0.604647113929502,0.565815239267694,1.18120757152309,0.307435147943927,1.03371317267288,0.363533729477506,0,0,0,0,88.1738578902311,1.08036656418786,1.94038025674132,1.92903331528433,7.27094957933322,7.31312152168489,7.0756078858912,25.5750557256263,0.469343416127421,0.42366414172764,1.7642271844397,11.8718102117866,3.06782410722221,2.47282992205439,2.26807453605959,4.10352249362653,0,20.025932617135,0,0,0,0,0.546776910884101,0,4.07948231985253,2.37917468950219,3.45499934511059,2.86401185404534,0.158167996790568,0.609958401380546,0.216010681643603,0.418176592028937,1.31017538247707,0.944050424693745,1.57041565878138,2.09404753587224,0.129614973291793,0,0,0.747582730219894,0.992750942742586,0.388902376688095,0.645799117388655,1.18269287843545,1.5256441023948,1.5624526181274,1.36317147753424,0,0,0.316011120628178,1.82452693761148,0.205421914329655,0.77952493786677,0.358053391334963,0.39736270956253,0.600977247599844,0.886137163047463,0.201932899896295,0.304827226619999,0.705783295957884,0.779663045918019,0.673482891482306,0.467507608726276,3.40095575422817,0,0.269141569828427,0.167884616364078,1.15913756419314,0.93841237725591,1.83151624267265,3.00115730710692,3.00943262421218,31.0613513439387,41.4292712856459,28.0718801585304,29.730600545458,45.2154463048624,26.4387864086395,41.1763725141402,52.2372595740096,71.1433582105201,65.7555595924811,0.207574695168353,1.59609949360412,0.853668028770671,0.729320151204882,1.04806581313991,1.47074806760011,0.666740183404846,0.618105171716683,0.962757628775446,0.758091635291392,0.760437899670719,0.377252682772152,1.591905626988,1.02440243847791,1.43588672389033,0.476293691283074,1.85414921511769,1.73618298417335,2.88460130562315,1.03039244094078,0.342869252385415,1.06485483695602,0.476872379894642,1.0174249164263,1.59985946706062,1.26921911837515,0.914639864363863,2.10455769150274,1.08643291076689,1.68342681497322,1.30498519936592,1.57607171800902,1.22769312950907,0.464810523557898,1.92906610981141,4.74640098082097,2.33931608445408,3.00819475667618,1.53030665655075,0.661774257358546,0.463735671240843 | |phase1_expression=2.24208385946712,0,0.454999239389536,0,0.500895729946347,0.671517087647559,0.467225281191051,0.774739940649458,40.4063632575284,85.4335521075276,2.91070545983358,0.8774937489487,0.684802919724823,0.786783621770977,0,0,0,0.157731082679119,0,0,7.73893940374735,0,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0,1.27006134691926,0.61506478758457,0,1.44425809875637,0.332469290716985,0.816677425049476,0,0,0,0,0,0,2.26614272356039,2.12891555560981,3.12029478674859,0,4.14247797122848,7.24964403023757,7.97162586204562,1.67983705950435,5.75010257459886,0.838913030288682,9.42970784614748,1.68046899571232,0.771778308107841,0.573066879877513,0.515672092277442,3.64169629547276,6.87688273053643,5.70448263155561,2.03306719241479,1.77858959222228,0,0,0.7104801149461,2.99600110518405,9.22123932771731,0.933206510776299,0.675029691658453,0.841299845405528,11.4260393761521,11.7060326704355,3.91970557487853,2.58782771749238,7.35375029288017,24.2254938198655,28.0912143787413,31.3357327842737,5.67111037239834,7.04454855738554,7.8137005583514,22.0554569211091,30.3891809417107,28.7260705820403,10.3120004915784,9.11178757114259,10.9975673036927,0.454357159999104,0.68014404096107,4.34796733052517,0,0,0,0,0,1.96622188184453,1.36344258062446,0.779358013808606,0.70667914902068,3.38024207464033,0,0,0,0.432982082022428,0,0,1.82694207550496,0.517875767294343,34.5870184021042,0.346970653532272,0.913396434936424,0.691846491768175,0.753613202763113,3.99801604261396,3.14166478324189,0,0.722996784599558,0,0,0,0,0,4.68449275218475,0.83778682725382,0.255457055208591,0.11981512450592,0.599902730993408,0.381210681219194,31.6058249144176,42.0900554593136,16.5863744788981,37.0245802009549,41.1701886301832,27.6358099264215,28.0677385107221,0.81471491080253,0.746441823660558,2.0217820674694,1.89397670297827,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,1.42876648217788,0.512454881139399,0.468508622798644,1.81092359517311,0.215567992932842,0.567318240503458,0.351902248327898,0,0.834141747676794,2.43776516565517,1.85203922767149,0.796137067273973,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,25.2347938276953,4.52780294468852,0.330418782983798,0,0,0.232236671860439,0.902072229254653,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.648414149624083,0.199141273254367,0.948339504765408,0.456994050438915,1.1270773567308,0.203651327845314,0,0.280543279561274,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0.393117990226406,0,0,0.482354319504834,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0.482443521363367,1.10851914099963,0.37898282354097,0.488894929326078,0,0.704070744865506,0.335012514883631,1.19021820443007,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,20.5504755184374,16.8784828692773,0,0.252470927204373,2.2085575359138,1.95219372148319,1.50796378412959,0.716906393857656,0.891194696329576,0.283076530788832,2.02405350837447,1.75353514746787,1.18586333383957,27.3123118958536,2.41298144854057,0.890328018336276,0.651547837414304,1.97964147567043,0,1.21390318077491,0.604647113929502,0.565815239267694,1.18120757152309,0.307435147943927,1.03371317267288,0.363533729477506,0,0,0,0,88.1738578902311,1.08036656418786,1.94038025674132,1.92903331528433,7.27094957933322,7.31312152168489,7.0756078858912,25.5750557256263,0.469343416127421,0.42366414172764,1.7642271844397,11.8718102117866,3.06782410722221,2.47282992205439,2.26807453605959,4.10352249362653,0,20.025932617135,0,0,0,0,0.546776910884101,0,4.07948231985253,2.37917468950219,3.45499934511059,2.86401185404534,0.158167996790568,0.609958401380546,0.216010681643603,0.418176592028937,1.31017538247707,0.944050424693745,1.57041565878138,2.09404753587224,0.129614973291793,0,0,0.747582730219894,0.992750942742586,0.388902376688095,0.645799117388655,1.18269287843545,1.5256441023948,1.5624526181274,1.36317147753424,0,0,0.316011120628178,1.82452693761148,0.205421914329655,0.77952493786677,0.358053391334963,0.39736270956253,0.600977247599844,0.886137163047463,0.201932899896295,0.304827226619999,0.705783295957884,0.779663045918019,0.673482891482306,0.467507608726276,3.40095575422817,0,0.269141569828427,0.167884616364078,1.15913756419314,0.93841237725591,1.83151624267265,3.00115730710692,3.00943262421218,31.0613513439387,41.4292712856459,28.0718801585304,29.730600545458,45.2154463048624,26.4387864086395,41.1763725141402,52.2372595740096,71.1433582105201,65.7555595924811,0.207574695168353,1.59609949360412,0.853668028770671,0.729320151204882,1.04806581313991,1.47074806760011,0.666740183404846,0.618105171716683,0.962757628775446,0.758091635291392,0.760437899670719,0.377252682772152,1.591905626988,1.02440243847791,1.43588672389033,0.476293691283074,1.85414921511769,1.73618298417335,2.88460130562315,1.03039244094078,0.342869252385415,1.06485483695602,0.476872379894642,1.0174249164263,1.59985946706062,1.26921911837515,0.914639864363863,2.10455769150274,1.08643291076689,1.68342681497322,1.30498519936592,1.57607171800902,1.22769312950907,0.464810523557898,1.92906610981141,4.74640098082097,2.33931608445408,3.00819475667618,1.53030665655075,0.661774257358546,0.463735671240843 | ||
|short_description=p2@Dos | |||
}} | }} |
Latest revision as of 09:30, 26 September 2015
Short description: | p2@Dos |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dos_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 5bp_to_ENSMUST00000123967_5end |
EntrezGene: | Dos |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.06e-11 | 44 |
neurectodermal cell | 1.06e-11 | 44 |
neural cell | 2.79e-11 | 43 |
CNS neuron (sensu Vertebrata) | 2.04e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.04e-10 | 23 |
neuron | 6.96e-10 | 33 |
neuronal stem cell | 6.96e-10 | 33 |
neuroblast | 6.96e-10 | 33 |
electrically signaling cell | 6.96e-10 | 33 |
electrically responsive cell | 2.88e-09 | 39 |
electrically active cell | 2.88e-09 | 39 |