FFCP PHASE1:Mm9::chr5:136108566..136108597,+: Difference between revisions
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{{FFCP|EntrezGene=215160|HGNC=|MCL_coexpression_id=347|UniProt=|association_with_transcript=0bp_to_ENSMUST00000129134,ENSMUST00000130647,ENSMUST00000144633_5end|description=CAGE_peak_1_at_Rhbdd2_5end|id=chr5:136108566..136108597,+|ontology_enrichment_celltype=CL:0000117!2.15e-08!23;CL:0000337!2.15e-08!23;CL:0000221!5.20e-08!44;CL:0000133!5.20e-08!44;CL:0002319!7.27e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.15e-08,23;CL:0000337,2.15e-08,23;CL:0000221,5.20e-08,44;CL:0000133,5.20e-08,44;CL:0002319,7.27e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.29e-25!71;UBERON:0003075!2.29e-25!71;UBERON:0007284!2.29e-25!71;UBERON:0001017!4.52e-25!73;UBERON:0005743!4.52e-25!73;UBERON:0000073!6.12e-24!75;UBERON:0001016!6.12e-24!75;UBERON:0004121!1.90e-23!102;UBERON:0000924!1.90e-23!102;UBERON:0006601!1.90e-23!102;UBERON:0001049!5.50e-23!52;UBERON:0005068!5.50e-23!52;UBERON:0006241!5.50e-23!52;UBERON:0007135!5.50e-23!52;UBERON:0000033!2.69e-22!63;UBERON:0000955!5.17e-22!50;UBERON:0006238!5.17e-22!50;UBERON:0002616!2.12e-21!49;UBERON:0003056!1.17e-17!49;UBERON:0003080!5.28e-17!40;UBERON:0002780!2.44e-16!39;UBERON:0001890!2.44e-16!39;UBERON:0006240!2.44e-16!39;UBERON:0002020!5.91e-14!34;UBERON:0007811!4.02e-13!86;UBERON:0000153!3.44e-12!94;UBERON:0002791!3.30e-11!29;UBERON:0003528!3.30e-11!29;UBERON:0001893!3.30e-11!29;UBERON:0004111!1.07e-07!122;UBERON:0002619!2.78e-07!17;UBERON:0000956!2.91e-07!21;UBERON:0001869!2.91e-07!21;UBERON:0000203!2.91e-07!21;UBERON:0000025!3.07e-07!114;UBERON:0002021!4.88e-07!10;UBERON:0000411!4.88e-07!10;UBERON:0001950!4.88e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.52e-25,73;UBERON:0000073,1.73e-24,54;UBERON:0001016,6.12e-24,75;UBERON:0002346,2.30e-23,64;UBERON:0003075,2.30e-23,64;UBERON:0007284,2.30e-23,64;UBERON:0001049,5.50e-23,52;UBERON:0005068,5.50e-23,52;UBERON:0006241,5.50e-23,52;UBERON:0007135,5.50e-23,52;UBERON:0004121,3.24e-21,95;UBERON:0000924,3.24e-21,95;UBERON:0006601,3.24e-21,95;UBERON:0000955,5.52e-20,47;UBERON:0006238,5.52e-20,47;UBERON:0002616,2.19e-19,46;UBERON:0010371,7.90e-19,73;UBERON:0003056,1.17e-17,49;UBERON:0010314,3.48e-17,92;UBERON:0003080,5.28e-17,40;UBERON:0002780,2.44e-16,39;UBERON:0001890,2.44e-16,39;UBERON:0006240,2.44e-16,39;UBERON:0002020,5.91e-14,34;UBERON:0003528,3.30e-11,29;UBERON:0002791,3.30e-11,29;UBERON:0001893,3.30e-11,29;UBERON:0004111,1.07e-07,122;UBERON:0002619,2.78e-07,17;UBERON:0000956,2.91e-07,21;UBERON:0001869,2.91e-07,21;UBERON:0000203,2.91e-07,21;UBERON:0000025,3.07e-07,114;UBERON:0002021,4.88e-07,10;UBERON:0000411,4.88e-07,10;UBERON:0001950,4.88e-07,10|phase1_expression=24.1824759128239,11.1672130444596,15.9249733786338,14.215817931421,17.0304548181758,13.5982210248631,15.1848216387092,18.7228818990286,12.248618827195,14.9801296846076,31.6753241217184,25.9259516734843,17.6336751829142,20.7186353733024,6.99530499812892,8.50396123037269,5.59649502502517,11.8298312009339,13.9856722277854,10.1853516431527,31.2108874854426,17.8723712161594,19.5899841854202,15.1992801653736,16.2880589557691,17.2269589234506,15.0766698655676,9.9116767035509,17.1021077510736,15.8778981748756,25.7207392360153,38.1018404075779,20.9122027778754,15.8481681015439,17.3310971850765,16.2909952451323,14.4960242946282,4.60384793810598,3.1253413780952,3.66466620781659,2.35292595212406,2.73218193983378,6.311634589405,18.6327290603854,18.0450937570736,18.7217687204915,37.5547845287059,39.0265029920999,38.8844543440015,46.8576056769023,20.7179904005537,38.8131923785423,6.37573903019398,8.70434570413613,10.0828139742739,14.9210472900849,10.601737277734,11.3447860301037,43.7003555456731,41.7902873624906,40.5652098243955,13.2149367506962,26.6788438833342,26.5470416598013,41.5323872278129,34.8135256323589,46.7376172408711,62.2433654620918,19.1825782770684,23.7610451463776,21.0324961351382,68.2705852725091,55.6588723198066,20.9459266657571,15.9103481890272,22.0612508786405,58.361416929676,65.2482297615309,62.9786786350598,46.951518431949,36.0461315793494,42.7148963856543,70.0749327493466,83.2888662846886,75.0239396584138,57.4525741673652,48.5487431524941,40.6350791899155,20.2946198132933,14.0563101798621,20.5803786978191,12.0459342777394,27.19885334831,19.9690180905992,29.2399387851451,30.0178014355215,21.3475518600263,13.6344258062446,12.2099422163348,17.666978725517,25.0701287202491,20.5322363862909,30.5766287647975,56.8853362522665,29.2262905365139,35.4703811665138,35.8922355960496,28.6601538094841,31.5904218049549,36.8136504880765,23.5940044401945,31.3599442661505,34.1310935938967,29.6923601888666,23.6353301342767,27.0183171358802,43.2591193535154,33.5470508054195,14.153768831198,12.7795811458453,7.28777010919299,9.21262980956922,27.9587641827183,32.2058876712702,24.0863712835473,17.1156226989756,10.3041007075091,8.39863823390771,10.1656181658452,65.3087187805027,61.3050807776959,26.7643770000401,67.6176605547955,49.6087987220841,71.0635112393695,52.4039279708857,15.0722258498468,13.933580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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215160 | |||
|HGNC= | |||
|MCL_coexpression_id=347 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000129134,ENSMUST00000130647,ENSMUST00000144633_5end | |||
|cluster_id=chr5:136108566..136108597,+ | |||
|description=CAGE_peak_1_at_Rhbdd2_5end | |||
|id=chr5:136108566..136108597,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.15e-08!23;CL:0000337!2.15e-08!23;CL:0000221!5.20e-08!44;CL:0000133!5.20e-08!44;CL:0002319!7.27e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.15e-08,23;CL:0000337,2.15e-08,23;CL:0000221,5.20e-08,44;CL:0000133,5.20e-08,44;CL:0002319,7.27e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.29e-25!71;UBERON:0003075!2.29e-25!71;UBERON:0007284!2.29e-25!71;UBERON:0001017!4.52e-25!73;UBERON:0005743!4.52e-25!73;UBERON:0000073!6.12e-24!75;UBERON:0001016!6.12e-24!75;UBERON:0004121!1.90e-23!102;UBERON:0000924!1.90e-23!102;UBERON:0006601!1.90e-23!102;UBERON:0001049!5.50e-23!52;UBERON:0005068!5.50e-23!52;UBERON:0006241!5.50e-23!52;UBERON:0007135!5.50e-23!52;UBERON:0000033!2.69e-22!63;UBERON:0000955!5.17e-22!50;UBERON:0006238!5.17e-22!50;UBERON:0002616!2.12e-21!49;UBERON:0003056!1.17e-17!49;UBERON:0003080!5.28e-17!40;UBERON:0002780!2.44e-16!39;UBERON:0001890!2.44e-16!39;UBERON:0006240!2.44e-16!39;UBERON:0002020!5.91e-14!34;UBERON:0007811!4.02e-13!86;UBERON:0000153!3.44e-12!94;UBERON:0002791!3.30e-11!29;UBERON:0003528!3.30e-11!29;UBERON:0001893!3.30e-11!29;UBERON:0004111!1.07e-07!122;UBERON:0002619!2.78e-07!17;UBERON:0000956!2.91e-07!21;UBERON:0001869!2.91e-07!21;UBERON:0000203!2.91e-07!21;UBERON:0000025!3.07e-07!114;UBERON:0002021!4.88e-07!10;UBERON:0000411!4.88e-07!10;UBERON:0001950!4.88e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.52e-25,73;UBERON:0000073,1.73e-24,54;UBERON:0001016,6.12e-24,75;UBERON:0002346,2.30e-23,64;UBERON:0003075,2.30e-23,64;UBERON:0007284,2.30e-23,64;UBERON:0001049,5.50e-23,52;UBERON:0005068,5.50e-23,52;UBERON:0006241,5.50e-23,52;UBERON:0007135,5.50e-23,52;UBERON:0004121,3.24e-21,95;UBERON:0000924,3.24e-21,95;UBERON:0006601,3.24e-21,95;UBERON:0000955,5.52e-20,47;UBERON:0006238,5.52e-20,47;UBERON:0002616,2.19e-19,46;UBERON:0010371,7.90e-19,73;UBERON:0003056,1.17e-17,49;UBERON:0010314,3.48e-17,92;UBERON:0003080,5.28e-17,40;UBERON:0002780,2.44e-16,39;UBERON:0001890,2.44e-16,39;UBERON:0006240,2.44e-16,39;UBERON:0002020,5.91e-14,34;UBERON:0003528,3.30e-11,29;UBERON:0002791,3.30e-11,29;UBERON:0001893,3.30e-11,29;UBERON:0004111,1.07e-07,122;UBERON:0002619,2.78e-07,17;UBERON:0000956,2.91e-07,21;UBERON:0001869,2.91e-07,21;UBERON:0000203,2.91e-07,21;UBERON:0000025,3.07e-07,114;UBERON:0002021,4.88e-07,10;UBERON:0000411,4.88e-07,10;UBERON:0001950,4.88e-07,10 | |||
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| |||
|short_description=p1@Rhbdd2 | |||
}} |
Latest revision as of 13:28, 25 September 2015
Short description: | p1@Rhbdd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rhbdd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:347 |
Association with transcript: | 0bp_to_ENSMUST00000129134, ENSMUST00000130647, ENSMUST00000144633_5end |
EntrezGene: | Rhbdd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.15e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.15e-08 | 23 |
ectodermal cell | 5.20e-08 | 44 |
neurectodermal cell | 5.20e-08 | 44 |
neural cell | 7.27e-08 | 43 |