FFCP PHASE1:Mm9::chr7:69127234..69127250,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=100526507|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=0bp_to_ENSMUST00000122834,ENSMUST00000137237,ENSMUST00000175109,NR_037287,uc012fmj.1_5end|description=CAGE_peak_1_at_Mir344g_5end|id=chr7:69127234..69127250,-|ontology_enrichment_celltype=CL:0000540!3.08e-10!33;CL:0000047!3.08e-10!33;CL:0000031!3.08e-10!33;CL:0000404!3.08e-10!33;CL:0000393!1.07e-07!39;CL:0000211!1.07e-07!39;CL:0002319!5.11e-07!43;CL:0000221!6.12e-07!44;CL:0000133!6.12e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,2.89e-10,33;CL:0000047,2.89e-10,33;CL:0000031,2.89e-10,33;CL:0000404,2.89e-10,33;CL:0000393,4.12e-07,39;CL:0000211,4.12e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.33e-24!73;UBERON:0005743!6.33e-24!73;UBERON:0000073!1.15e-22!75;UBERON:0001016!1.15e-22!75;UBERON:0002346!1.87e-20!71;UBERON:0003075!1.87e-20!71;UBERON:0007284!1.87e-20!71;UBERON:0004121!2.97e-19!102;UBERON:0000924!2.97e-19!102;UBERON:0006601!2.97e-19!102;UBERON:0000955!1.01e-18!50;UBERON:0006238!1.01e-18!50;UBERON:0001049!1.39e-18!52;UBERON:0005068!1.39e-18!52;UBERON:0006241!1.39e-18!52;UBERON:0007135!1.39e-18!52;UBERON:0002616!5.48e-18!49;UBERON:0000033!2.80e-16!63;UBERON:0003080!7.03e-15!40;UBERON:0002780!3.45e-14!39;UBERON:0001890!3.45e-14!39;UBERON:0006240!3.45e-14!39;UBERON:0003056!9.38e-14!49;UBERON:0002020!7.63e-13!34;UBERON:0002791!2.71e-11!29;UBERON:0003528!2.71e-11!29;UBERON:0001893!2.71e-11!29;UBERON:0000956!3.57e-08!21;UBERON:0001869!3.57e-08!21;UBERON:0000203!3.57e-08!21;UBERON:0002021!4.41e-08!10;UBERON:0000411!4.41e-08!10;UBERON:0001950!4.41e-08!10;UBERON:0002619!1.07e-07!17;UBERON:0000468!3.87e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.28e-23,73;UBERON:0001016,8.77e-22,75;UBERON:0000073,2.62e-20,54;UBERON:0001049,5.05e-19,52;UBERON:0005068,5.05e-19,52;UBERON:0006241,5.05e-19,52;UBERON:0007135,5.05e-19,52;UBERON:0002346,1.80e-17,64;UBERON:0003075,1.80e-17,64;UBERON:0007284,1.80e-17,64;UBERON:0000955,3.72e-17,47;UBERON:0006238,3.72e-17,47;UBERON:0002616,2.36e-16,46;UBERON:0003080,7.43e-15,40;UBERON:0002780,4.35e-14,39;UBERON:0001890,4.35e-14,39;UBERON:0006240,4.35e-14,39;UBERON:0004121,5.26e-14,95;UBERON:0000924,5.26e-14,95;UBERON:0006601,5.26e-14,95;UBERON:0002020,4.18e-13,34;UBERON:0010371,8.59e-13,73;UBERON:0003056,1.00e-11,49;UBERON:0003528,2.62e-11,29;UBERON:0002791,2.62e-11,29;UBERON:0001893,2.62e-11,29;UBERON:0010314,9.17e-10,92;UBERON:0002021,3.69e-09,10;UBERON:0000411,3.69e-09,10;UBERON:0001950,3.69e-09,10;UBERON:0000956,9.34e-08,21;UBERON:0001869,9.34e-08,21;UBERON:0000203,9.34e-08,21;UBERON:0002619,4.11e-07,17|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0.183546752161682,0,0.218025156380447,0.439372365468944,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,2.63011399117477,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,2.17748185847803,1.21505344498522,1.05162480675691,5.71301968807607,4.41737081903227,3.67472397644862,2.77951865952885,0.919218786610021,16.5173821499083,17.3654779795855,19.5080297235429,2.2420668914133,1.73826522844578,5.73004707612436,14.5175159480718,29.2636557216474,20.933359945423,6.48182888042069,7.40332740155335,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.68510327831436,0,6.97678053604676,2.94925055502431,1.82679286987285,1.15307748628029,2.11011696773672,1.76383060703557,3.14166478324189,0,0,0.884610551949874,1.61766849947409,0,0,0,58.848940199321,88.386510275278,0,0,0,0,42.3907509515648,20.5875271268382,5.02617408451458,30.0716073932638,29.407277592988,20.3632283668369,23.6872244078926,0.203678727700633,0.248813941220186,0,15.7831391914855,0.910843100738926,0,0.360124259610698,0.150704817835715,0.340182495756639,0.512454881139399,0.562210347358373,56.9147415625834,0,0.378212160335639,0.351902248327898,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0.710234206755631,0,0,0,0,0,0,0,0,0,0.219550115291051,0.268412837520744,11.565947171027,2.16099685996497,0,0,2.34617075588757,1.16118335930219,3.09281907173024,2.42020229548011,1.11189021922435,0.760902504450237,0,0,2.5133520880027,1.59165177632921,1.9496408711912,0,0.864552199498777,0.398282546508734,0.189667900953082,2.74196430263349,1.1270773567308,0.610953983535943,1.55161989734101,0.841629838683823,2.65593455921881,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0,0,0.763877555344259,0,0,0,0,0.744281895337007,0,0,0,0,4.80358294433172,1.89491411770485,5.86673915191293,8.14776411720903,11.0304416695596,7.53778158488171,1.19021820443007,0.975668239288994,18.6009470045305,16.8313164133069,18.1778436269535,8.52089236521838,7.25276923836761,7.37710198765709,0,0,0,0,22.7981837782665,21.6841620195576,0,1.26235463602186,9.14973836307144,10.1514073517126,10.5557464889071,3.58453196928828,10.9171350300373,6.22768367735431,13.3587531552715,16.3663280430335,18.1832377855401,57.5165156395035,0.141940085208269,0.35613120733451,0.325773918707152,1.15479086080775,7.96470830039777,1.45668381692989,1.81394134178851,1.88605079755898,1.18120757152309,3.07435147943927,4.39328098385976,11.9966130727577,8.55593708123331,6.0046984007805,2.10837217149998,2.06271086496374,56.5129745551288,2.16073312837572,0.776152102696527,2.7863814554107,4.78818630834139,4.10248280484762,4.44282355625727,1.522324745573,0,0.21183207086382,0.661585194164886,0,0.322928853391811,0.241251699712623,0.358117032009409,0.164140899745061,0.582961673259701,24.8469904694083,0,2.68302928352189,1.29636169158798,0.565105371014073,0.136694227721025,0.686334519619568,0,0,0,1.90934123603023,1.73984796469624,3.45643094115643,1.72808545314882,1.25452977608681,1.31017538247707,1.48350781023303,2.23164330458407,2.87931536182433,0.90730481304255,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0.167884616364078,1.35232715822533,0,0.36630324853453,0,0,30.4965995013216,32.6830917920096,30.363462212288,28.1839219043648,26.718218271055,27.1941803060292,27.0009000092722,35.1250538514892,41.2359592175626,27.9590568345983,0.103787347584177,1.19707462020309,1.70733605754134,2.18796045361465,1.04806581313991,1.83843508450014,4.66718128383392,3.09052585858341,6.73930340142812,3.79045817645696,5.57654459758527,5.84741658296836,3.93294331373506,4.73786127796033,3.56099907524802,3.33405583898152,4.63537303779422,4.43691207066522,4.53294490883637,3.97437084362873,4.4573002810104,4.61437096014278,5.24559617884106,4.79643174886684,4.04670335785922,4.90764725771724,3.47563148458268,3.6829759601298,5.16055632614275,1.12228454331548,2.84724043498018,2.85662998889134,3.6830793885272,4.80304207676495,2.50778594275484,2.24829520144151,1.63752125911786,1.28922632428979,1.14772999241306,0.441182838239031,2.55054619182464|short_description=p1@Mir344g}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100526507 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000122834,ENSMUST00000137237,ENSMUST00000175109,NR_037287,uc012fmj.1_5end | |||
|cluster_id=chr7:69127234..69127250,- | |||
|description=CAGE_peak_1_at_Mir344g_5end | |||
|id=chr7:69127234..69127250,- | |||
|ontology_enrichment_celltype=CL:0000540!3.08e-10!33;CL:0000047!3.08e-10!33;CL:0000031!3.08e-10!33;CL:0000404!3.08e-10!33;CL:0000393!1.07e-07!39;CL:0000211!1.07e-07!39;CL:0002319!5.11e-07!43;CL:0000221!6.12e-07!44;CL:0000133!6.12e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.89e-10,33;CL:0000047,2.89e-10,33;CL:0000031,2.89e-10,33;CL:0000404,2.89e-10,33;CL:0000393,4.12e-07,39;CL:0000211,4.12e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.33e-24!73;UBERON:0005743!6.33e-24!73;UBERON:0000073!1.15e-22!75;UBERON:0001016!1.15e-22!75;UBERON:0002346!1.87e-20!71;UBERON:0003075!1.87e-20!71;UBERON:0007284!1.87e-20!71;UBERON:0004121!2.97e-19!102;UBERON:0000924!2.97e-19!102;UBERON:0006601!2.97e-19!102;UBERON:0000955!1.01e-18!50;UBERON:0006238!1.01e-18!50;UBERON:0001049!1.39e-18!52;UBERON:0005068!1.39e-18!52;UBERON:0006241!1.39e-18!52;UBERON:0007135!1.39e-18!52;UBERON:0002616!5.48e-18!49;UBERON:0000033!2.80e-16!63;UBERON:0003080!7.03e-15!40;UBERON:0002780!3.45e-14!39;UBERON:0001890!3.45e-14!39;UBERON:0006240!3.45e-14!39;UBERON:0003056!9.38e-14!49;UBERON:0002020!7.63e-13!34;UBERON:0002791!2.71e-11!29;UBERON:0003528!2.71e-11!29;UBERON:0001893!2.71e-11!29;UBERON:0000956!3.57e-08!21;UBERON:0001869!3.57e-08!21;UBERON:0000203!3.57e-08!21;UBERON:0002021!4.41e-08!10;UBERON:0000411!4.41e-08!10;UBERON:0001950!4.41e-08!10;UBERON:0002619!1.07e-07!17;UBERON:0000468!3.87e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.28e-23,73;UBERON:0001016,8.77e-22,75;UBERON:0000073,2.62e-20,54;UBERON:0001049,5.05e-19,52;UBERON:0005068,5.05e-19,52;UBERON:0006241,5.05e-19,52;UBERON:0007135,5.05e-19,52;UBERON:0002346,1.80e-17,64;UBERON:0003075,1.80e-17,64;UBERON:0007284,1.80e-17,64;UBERON:0000955,3.72e-17,47;UBERON:0006238,3.72e-17,47;UBERON:0002616,2.36e-16,46;UBERON:0003080,7.43e-15,40;UBERON:0002780,4.35e-14,39;UBERON:0001890,4.35e-14,39;UBERON:0006240,4.35e-14,39;UBERON:0004121,5.26e-14,95;UBERON:0000924,5.26e-14,95;UBERON:0006601,5.26e-14,95;UBERON:0002020,4.18e-13,34;UBERON:0010371,8.59e-13,73;UBERON:0003056,1.00e-11,49;UBERON:0003528,2.62e-11,29;UBERON:0002791,2.62e-11,29;UBERON:0001893,2.62e-11,29;UBERON:0010314,9.17e-10,92;UBERON:0002021,3.69e-09,10;UBERON:0000411,3.69e-09,10;UBERON:0001950,3.69e-09,10;UBERON:0000956,9.34e-08,21;UBERON:0001869,9.34e-08,21;UBERON:0000203,9.34e-08,21;UBERON:0002619,4.11e-07,17 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.506884656097573,0.183546752161682,0,0.218025156380447,0.439372365468944,0.388859798148567,0.419959264876088,0,0,0,0,0,0,0,2.63011399117477,1.05798195854407,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,2.17748185847803,1.21505344498522,1.05162480675691,5.71301968807607,4.41737081903227,3.67472397644862,2.77951865952885,0.919218786610021,16.5173821499083,17.3654779795855,19.5080297235429,2.2420668914133,1.73826522844578,5.73004707612436,14.5175159480718,29.2636557216474,20.933359945423,6.48182888042069,7.40332740155335,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.68510327831436,0,6.97678053604676,2.94925055502431,1.82679286987285,1.15307748628029,2.11011696773672,1.76383060703557,3.14166478324189,0,0,0.884610551949874,1.61766849947409,0,0,0,58.848940199321,88.386510275278,0,0,0,0,42.3907509515648,20.5875271268382,5.02617408451458,30.0716073932638,29.407277592988,20.3632283668369,23.6872244078926,0.203678727700633,0.248813941220186,0,15.7831391914855,0.910843100738926,0,0.360124259610698,0.150704817835715,0.340182495756639,0.512454881139399,0.562210347358373,56.9147415625834,0,0.378212160335639,0.351902248327898,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0.710234206755631,0,0,0,0,0,0,0,0,0,0.219550115291051,0.268412837520744,11.565947171027,2.16099685996497,0,0,2.34617075588757,1.16118335930219,3.09281907173024,2.42020229548011,1.11189021922435,0.760902504450237,0,0,2.5133520880027,1.59165177632921,1.9496408711912,0,0.864552199498777,0.398282546508734,0.189667900953082,2.74196430263349,1.1270773567308,0.610953983535943,1.55161989734101,0.841629838683823,2.65593455921881,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0.393117990226406,0.224862112384854,0,0,0.763877555344259,0,0,0,0,0.744281895337007,0,0,0,0,4.80358294433172,1.89491411770485,5.86673915191293,8.14776411720903,11.0304416695596,7.53778158488171,1.19021820443007,0.975668239288994,18.6009470045305,16.8313164133069,18.1778436269535,8.52089236521838,7.25276923836761,7.37710198765709,0,0,0,0,22.7981837782665,21.6841620195576,0,1.26235463602186,9.14973836307144,10.1514073517126,10.5557464889071,3.58453196928828,10.9171350300373,6.22768367735431,13.3587531552715,16.3663280430335,18.1832377855401,57.5165156395035,0.141940085208269,0.35613120733451,0.325773918707152,1.15479086080775,7.96470830039777,1.45668381692989,1.81394134178851,1.88605079755898,1.18120757152309,3.07435147943927,4.39328098385976,11.9966130727577,8.55593708123331,6.0046984007805,2.10837217149998,2.06271086496374,56.5129745551288,2.16073312837572,0.776152102696527,2.7863814554107,4.78818630834139,4.10248280484762,4.44282355625727,1.522324745573,0,0.21183207086382,0.661585194164886,0,0.322928853391811,0.241251699712623,0.358117032009409,0.164140899745061,0.582961673259701,24.8469904694083,0,2.68302928352189,1.29636169158798,0.565105371014073,0.136694227721025,0.686334519619568,0,0,0,1.90934123603023,1.73984796469624,3.45643094115643,1.72808545314882,1.25452977608681,1.31017538247707,1.48350781023303,2.23164330458407,2.87931536182433,0.90730481304255,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0.167884616364078,1.35232715822533,0,0.36630324853453,0,0,30.4965995013216,32.6830917920096,30.363462212288,28.1839219043648,26.718218271055,27.1941803060292,27.0009000092722,35.1250538514892,41.2359592175626,27.9590568345983,0.103787347584177,1.19707462020309,1.70733605754134,2.18796045361465,1.04806581313991,1.83843508450014,4.66718128383392,3.09052585858341,6.73930340142812,3.79045817645696,5.57654459758527,5.84741658296836,3.93294331373506,4.73786127796033,3.56099907524802,3.33405583898152,4.63537303779422,4.43691207066522,4.53294490883637,3.97437084362873,4.4573002810104,4.61437096014278,5.24559617884106,4.79643174886684,4.04670335785922,4.90764725771724,3.47563148458268,3.6829759601298,5.16055632614275,1.12228454331548,2.84724043498018,2.85662998889134,3.6830793885272,4.80304207676495,2.50778594275484,2.24829520144151,1.63752125911786,1.28922632428979,1.14772999241306,0.441182838239031,2.55054619182464 | |||
|short_description=p1@Mir344g | |||
}} |
Latest revision as of 00:19, 27 September 2015
Short description: | p1@Mir344g |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mir344g_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_ENSMUST00000122834, ENSMUST00000137237, ENSMUST00000175109, NR_037287, uc012fmj.1_5end |
EntrezGene: | Mir344g |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.89e-10 | 33 |
neuronal stem cell | 2.89e-10 | 33 |
neuroblast | 2.89e-10 | 33 |
electrically signaling cell | 2.89e-10 | 33 |
electrically responsive cell | 4.12e-07 | 39 |
electrically active cell | 4.12e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.28e-23 | 73 |
nervous system | 8.77e-22 | 75 |
regional part of nervous system | 2.62e-20 | 54 |
neural tube | 5.05e-19 | 52 |
neural rod | 5.05e-19 | 52 |
future spinal cord | 5.05e-19 | 52 |
neural keel | 5.05e-19 | 52 |
neurectoderm | 1.80e-17 | 64 |
neural plate | 1.80e-17 | 64 |
presumptive neural plate | 1.80e-17 | 64 |
brain | 3.72e-17 | 47 |
future brain | 3.72e-17 | 47 |
regional part of brain | 2.36e-16 | 46 |
anterior neural tube | 7.43e-15 | 40 |
regional part of forebrain | 4.35e-14 | 39 |
forebrain | 4.35e-14 | 39 |
future forebrain | 4.35e-14 | 39 |
ectoderm-derived structure | 5.26e-14 | 95 |
ectoderm | 5.26e-14 | 95 |
presumptive ectoderm | 5.26e-14 | 95 |
gray matter | 4.18e-13 | 34 |
ecto-epithelium | 8.59e-13 | 73 |
pre-chordal neural plate | 1.00e-11 | 49 |
brain grey matter | 2.62e-11 | 29 |
regional part of telencephalon | 2.62e-11 | 29 |
telencephalon | 2.62e-11 | 29 |
structure with developmental contribution from neural crest | 9.17e-10 | 92 |
occipital lobe | 3.69e-09 | 10 |
visual cortex | 3.69e-09 | 10 |
neocortex | 3.69e-09 | 10 |
cerebral cortex | 9.34e-08 | 21 |
cerebral hemisphere | 9.34e-08 | 21 |
pallium | 9.34e-08 | 21 |
regional part of cerebral cortex | 4.11e-07 | 17 |